Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt16c19
         (816 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    25   0.95 
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    25   0.95 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.8  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   5.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.1  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = +1

Query: 148 YLVVNKQNHDFIKYFQTN 201
           ++++NKQ ++ I+YFQ N
Sbjct: 468 FVILNKQINNLIEYFQKN 485


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = +1

Query: 148 YLVVNKQNHDFIKYFQTN 201
           ++++NKQ ++ I+YFQ N
Sbjct: 193 FVILNKQINNLIEYFQKN 210


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 456 YAALILYYCHEFCTNI 503
           YAA + Y CH  C+ I
Sbjct: 642 YAADVFYICHVCCSTI 657



 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 148  YLVVNKQNHDFIKYFQTNFKWYSTQ 222
            ++VVN+Q    + YF TN     T+
Sbjct: 1269 FVVVNQQIGGIVTYFSTNLPKRETE 1293


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 16/61 (26%), Positives = 24/61 (39%)
 Frame = -1

Query: 327 HVFFAM*YYHSHIYLHPFFKSANEIMLFLHCLKLRLCTVPFEICLKIFNKIVILLVYN*I 148
           H F A   +  H+     F   N  +LFL CL      + F  C+  F    I+   + +
Sbjct: 168 HFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLL 227

Query: 147 F 145
           F
Sbjct: 228 F 228



 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = -1

Query: 306 YYHSHIYLHPFFKSANEIMLFLHCLKLRLCTVPFEICLKIFNKIVIL 166
           +Y+ H+     F      +LFL C+    C +   +C+  F +  I+
Sbjct: 261 FYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFII 307


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +2

Query: 341 AYPNSIYERTKNLYIATNFHVFYFQPVVILVINYS 445
           +Y + I+     L     F + YFQ  V+  +N++
Sbjct: 130 SYMSYIFANIMGLEFYKQFAIEYFQMYVLFFVNFA 164


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +2

Query: 341 AYPNSIYERTKNLYIATNFHVFYFQPVVILVINYS 445
           +Y + I+     L     F + YFQ  V+  +N++
Sbjct: 130 SYMSYIFANIMGLEFYKQFAIEYFQMYVLFFVNFA 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,616
Number of Sequences: 336
Number of extensions: 4347
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)