Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16c12
(871 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-941|AAN09181.1| 632|Drosophila melanogaster CG3168-PC,... 93 5e-19
AE014298-940|AAN09180.1| 632|Drosophila melanogaster CG3168-PB,... 93 5e-19
AE014298-939|AAF46193.2| 632|Drosophila melanogaster CG3168-PA,... 93 5e-19
AL109630-12|CAB65877.1| 558|Drosophila melanogaster EG:BACR7A4.... 40 0.006
AE014298-135|AAF45574.3| 558|Drosophila melanogaster CG3690-PA ... 40 0.006
BT022907-1|AAY55323.1| 454|Drosophila melanogaster IP12646p pro... 32 0.89
BT022897-1|AAY55313.1| 543|Drosophila melanogaster IP12546p pro... 32 0.89
BT022866-1|AAY55282.1| 454|Drosophila melanogaster IP12746p pro... 32 0.89
BT022226-1|AAY54642.1| 454|Drosophila melanogaster IP12446p pro... 32 0.89
AY070961-1|AAL48583.1| 563|Drosophila melanogaster RE06169p pro... 32 0.89
AE014297-1899|AAF55098.1| 556|Drosophila melanogaster CG14855-P... 32 0.89
AE014297-1184|AAF54546.3| 563|Drosophila melanogaster CG31272-P... 32 0.89
AE014296-1026|AAF50734.1| 540|Drosophila melanogaster CG5592-PA... 32 0.89
AY118994-1|AAM50854.1| 545|Drosophila melanogaster LP02775p pro... 32 1.2
AE014297-2681|AAF55683.2| 545|Drosophila melanogaster CG16727-P... 32 1.2
AY113212-1|AAM29217.1| 510|Drosophila melanogaster AT07117p pro... 30 3.6
AE014297-1183|AAO41541.1| 510|Drosophila melanogaster CG14691-P... 30 3.6
AE014297-1182|AAF54545.2| 522|Drosophila melanogaster CG14691-P... 30 3.6
BT023766-1|AAZ41774.1| 567|Drosophila melanogaster RE19417p pro... 30 4.8
AY094844-1|AAM11197.1| 585|Drosophila melanogaster RE03738p pro... 30 4.8
AY058437-1|AAL13666.1| 548|Drosophila melanogaster GH21655p pro... 30 4.8
AE014297-3516|AAF56271.1| 548|Drosophila melanogaster CG6331-PA... 30 4.8
AE014297-2685|AAN13803.1| 585|Drosophila melanogaster CG6231-PD... 30 4.8
AE014297-2684|AAN13802.1| 585|Drosophila melanogaster CG6231-PC... 30 4.8
AE014297-2683|AAN13801.1| 585|Drosophila melanogaster CG6231-PB... 30 4.8
AE014297-2682|AAF55684.2| 585|Drosophila melanogaster CG6231-PA... 30 4.8
AY102694-1|AAM27523.1| 538|Drosophila melanogaster LP04053p pro... 29 6.3
AE014297-2680|AAF55682.1| 538|Drosophila melanogaster CG17752-P... 29 6.3
>AE014298-941|AAN09181.1| 632|Drosophila melanogaster CG3168-PC,
isoform C protein.
Length = 632
Score = 93.1 bits (221), Expect = 5e-19
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = -2
Query: 870 SMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
SMVAARLGGIIGN+VIA LLD YCP+PTFIV+ LL GGGLMCL LPNTTR+ L
Sbjct: 579 SMVAARLGGIIGNIVIAQLLDNYCPSPTFIVSGLLIGGGLMCLLLPNTTRKEL 631
>AE014298-940|AAN09180.1| 632|Drosophila melanogaster CG3168-PB,
isoform B protein.
Length = 632
Score = 93.1 bits (221), Expect = 5e-19
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = -2
Query: 870 SMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
SMVAARLGGIIGN+VIA LLD YCP+PTFIV+ LL GGGLMCL LPNTTR+ L
Sbjct: 579 SMVAARLGGIIGNIVIAQLLDNYCPSPTFIVSGLLIGGGLMCLLLPNTTRKEL 631
>AE014298-939|AAF46193.2| 632|Drosophila melanogaster CG3168-PA,
isoform A protein.
Length = 632
Score = 93.1 bits (221), Expect = 5e-19
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = -2
Query: 870 SMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
SMVAARLGGIIGN+VIA LLD YCP+PTFIV+ LL GGGLMCL LPNTTR+ L
Sbjct: 579 SMVAARLGGIIGNIVIAQLLDNYCPSPTFIVSGLLIGGGLMCLLLPNTTRKEL 631
>AL109630-12|CAB65877.1| 558|Drosophila melanogaster EG:BACR7A4.13
protein.
Length = 558
Score = 39.5 bits (88), Expect = 0.006
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 867 MVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQALQ 709
M+ RLG ++GN+ AL+ C P +++ + G M FLP + AL+
Sbjct: 506 MMFGRLGSLLGNIFFPALMGLGCVPPFLMISAFMLAGCFMAAFLPLKNKAALK 558
>AE014298-135|AAF45574.3| 558|Drosophila melanogaster CG3690-PA
protein.
Length = 558
Score = 39.5 bits (88), Expect = 0.006
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 867 MVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQALQ 709
M+ RLG ++GN+ AL+ C P +++ + G M FLP + AL+
Sbjct: 506 MMFGRLGSLLGNIFFPALMGLGCVPPFLMISAFMLAGCFMAAFLPLKNKAALK 558
>BT022907-1|AAY55323.1| 454|Drosophila melanogaster IP12646p
protein.
Length = 454
Score = 32.3 bits (70), Expect = 0.89
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = -2
Query: 864 VAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQALQ*HFIIHTE 685
+ ++G ++ +V++ Y P P FI+ ++ G L+ LFLP T+ A + E
Sbjct: 381 IMGQMGALLSPLVLSTHR-YYRPLPMFIITLVSVIGALIILFLPE-TKGATMPQTLDEAE 438
Query: 684 LKRWTV 667
KRWT+
Sbjct: 439 -KRWTL 443
>BT022897-1|AAY55313.1| 543|Drosophila melanogaster IP12546p
protein.
Length = 543
Score = 32.3 bits (70), Expect = 0.89
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = -2
Query: 864 VAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQALQ*HFIIHTE 685
+ ++G ++ +V++ Y P P FI+ ++ G L+ LFLP T+ A + E
Sbjct: 470 IMGQMGALLSPLVLSTHR-YYRPLPMFIITLVSVIGALIILFLPE-TKGATMPQTLDEAE 527
Query: 684 LKRWTV 667
KRWT+
Sbjct: 528 -KRWTL 532
>BT022866-1|AAY55282.1| 454|Drosophila melanogaster IP12746p
protein.
Length = 454
Score = 32.3 bits (70), Expect = 0.89
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = -2
Query: 864 VAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQALQ*HFIIHTE 685
+ ++G ++ +V++ Y P P FI+ ++ G L+ LFLP T+ A + E
Sbjct: 381 IMGQMGALLSPLVLSTHR-YYRPLPMFIITLVSVIGALIILFLPE-TKGATMPQTLDEAE 438
Query: 684 LKRWTV 667
KRWT+
Sbjct: 439 -KRWTL 443
>BT022226-1|AAY54642.1| 454|Drosophila melanogaster IP12446p
protein.
Length = 454
Score = 32.3 bits (70), Expect = 0.89
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = -2
Query: 864 VAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQALQ*HFIIHTE 685
+ ++G ++ +V++ Y P P FI+ ++ G L+ LFLP T+ A + E
Sbjct: 381 IMGQMGALLSPLVLSTHR-YYRPLPMFIITLVSVIGALIILFLPE-TKGATMPQTLDEAE 438
Query: 684 LKRWTV 667
KRWT+
Sbjct: 439 -KRWTL 443
>AY070961-1|AAL48583.1| 563|Drosophila melanogaster RE06169p
protein.
Length = 563
Score = 32.3 bits (70), Expect = 0.89
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = -2
Query: 870 SMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTR 721
+M+ R G + GN++ + T C P +V+ +L G++ + LP+ +
Sbjct: 510 AMMCGRFGALSGNLLFPVFVQTGCLPPFIMVSSVLILSGILSISLPDPAK 559
>AE014297-1899|AAF55098.1| 556|Drosophila melanogaster CG14855-PA
protein.
Length = 556
Score = 32.3 bits (70), Expect = 0.89
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 804 YCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
Y PAP+ I+ +L G +CL LP T + L
Sbjct: 476 YKPAPSIILGLLFLSGAYVCLLLPETRNKKL 506
>AE014297-1184|AAF54546.3| 563|Drosophila melanogaster CG31272-PA
protein.
Length = 563
Score = 32.3 bits (70), Expect = 0.89
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = -2
Query: 870 SMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTR 721
+M+ R G + GN++ + T C P +V+ +L G++ + LP+ +
Sbjct: 510 AMMCGRFGALSGNLLFPVFVQTGCLPPFIMVSSVLILSGILSISLPDPAK 559
>AE014296-1026|AAF50734.1| 540|Drosophila melanogaster CG5592-PA
protein.
Length = 540
Score = 32.3 bits (70), Expect = 0.89
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = -2
Query: 864 VAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQALQ*HFIIHTE 685
+ ++G ++ +V++ Y P P FI+ ++ G L+ LFLP T+ A + E
Sbjct: 467 IMGQMGALLSPLVLSTHR-YYRPLPMFIITLVSVIGALIILFLPE-TKGATMPQTLDEAE 524
Query: 684 LKRWTV 667
KRWT+
Sbjct: 525 -KRWTL 529
>AY118994-1|AAM50854.1| 545|Drosophila melanogaster LP02775p
protein.
Length = 545
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 816 LLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
L Y P P+ ++VL+ G L+CL LP T + L
Sbjct: 472 LAQYYKPLPSIFISVLMFLGALLCLTLPETLHKKL 506
>AE014297-2681|AAF55683.2| 545|Drosophila melanogaster CG16727-PA
protein.
Length = 545
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 816 LLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
L Y P P+ ++VL+ G L+CL LP T + L
Sbjct: 472 LAQYYKPLPSIFISVLMFLGALLCLTLPETLHKKL 506
>AY113212-1|AAM29217.1| 510|Drosophila melanogaster AT07117p
protein.
Length = 510
Score = 30.3 bits (65), Expect = 3.6
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -2
Query: 867 MVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
M RLG + GN+++ + C AP + L++ L LFL Q+L
Sbjct: 458 MTFGRLGSVSGNMLLPVFMQLSCLAPFLWLCSLMSIAFLFSLFLKVDDEQSL 509
>AE014297-1183|AAO41541.1| 510|Drosophila melanogaster CG14691-PB,
isoform B protein.
Length = 510
Score = 30.3 bits (65), Expect = 3.6
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -2
Query: 867 MVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
M RLG + GN+++ + C AP + L++ L LFL Q+L
Sbjct: 458 MTFGRLGSVSGNMLLPVFMQLSCLAPFLWLCSLMSIAFLFSLFLKVDDEQSL 509
>AE014297-1182|AAF54545.2| 522|Drosophila melanogaster CG14691-PA,
isoform A protein.
Length = 522
Score = 30.3 bits (65), Expect = 3.6
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -2
Query: 867 MVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
M RLG + GN+++ + C AP + L++ L LFL Q+L
Sbjct: 470 MTFGRLGSVSGNMLLPVFMQLSCLAPFLWLCSLMSIAFLFSLFLKVDDEQSL 521
>BT023766-1|AAZ41774.1| 567|Drosophila melanogaster RE19417p
protein.
Length = 567
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 795 APTFIVAVLLAGGGLMCLFLPNTTRQAL 712
AP+ I+ VL G +CL LP T ++L
Sbjct: 479 APSIILGVLFFAGSFVCLLLPETLNRSL 506
>AY094844-1|AAM11197.1| 585|Drosophila melanogaster RE03738p
protein.
Length = 585
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 795 APTFIVAVLLAGGGLMCLFLPNTTRQAL 712
AP+ I+ VL G +CL LP T ++L
Sbjct: 479 APSIILGVLFFAGSFVCLLLPETLNRSL 506
>AY058437-1|AAL13666.1| 548|Drosophila melanogaster GH21655p
protein.
Length = 548
Score = 29.9 bits (64), Expect = 4.8
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -2
Query: 870 SMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
S + AR+GGI+ + L + + P P I L GL+ L LP T + +
Sbjct: 460 SSMVARVGGILAPY-LKLLGEIWRPLPLIICGALSLTAGLLSLLLPETLNKPM 511
>AE014297-3516|AAF56271.1| 548|Drosophila melanogaster CG6331-PA
protein.
Length = 548
Score = 29.9 bits (64), Expect = 4.8
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -2
Query: 870 SMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
S + AR+GGI+ + L + + P P I L GL+ L LP T + +
Sbjct: 460 SSMVARVGGILAPY-LKLLGEIWRPLPLIICGALSLTAGLLSLLLPETLNKPM 511
>AE014297-2685|AAN13803.1| 585|Drosophila melanogaster CG6231-PD,
isoform D protein.
Length = 585
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 795 APTFIVAVLLAGGGLMCLFLPNTTRQAL 712
AP+ I+ VL G +CL LP T ++L
Sbjct: 479 APSIILGVLFFAGSFVCLLLPETLNRSL 506
>AE014297-2684|AAN13802.1| 585|Drosophila melanogaster CG6231-PC,
isoform C protein.
Length = 585
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 795 APTFIVAVLLAGGGLMCLFLPNTTRQAL 712
AP+ I+ VL G +CL LP T ++L
Sbjct: 479 APSIILGVLFFAGSFVCLLLPETLNRSL 506
>AE014297-2683|AAN13801.1| 585|Drosophila melanogaster CG6231-PB,
isoform B protein.
Length = 585
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 795 APTFIVAVLLAGGGLMCLFLPNTTRQAL 712
AP+ I+ VL G +CL LP T ++L
Sbjct: 479 APSIILGVLFFAGSFVCLLLPETLNRSL 506
>AE014297-2682|AAF55684.2| 585|Drosophila melanogaster CG6231-PA,
isoform A protein.
Length = 585
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 795 APTFIVAVLLAGGGLMCLFLPNTTRQAL 712
AP+ I+ VL G +CL LP T ++L
Sbjct: 479 APSIILGVLFFAGSFVCLLLPETLNRSL 506
>AY102694-1|AAM27523.1| 538|Drosophila melanogaster LP04053p
protein.
Length = 538
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 804 YCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
Y P P+ +++ LL G +CL LP T + L
Sbjct: 465 YKPLPSLLISFLLIIGACLCLTLPETLHKQL 495
>AE014297-2680|AAF55682.1| 538|Drosophila melanogaster CG17752-PA
protein.
Length = 538
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 804 YCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
Y P P+ +++ LL G +CL LP T + L
Sbjct: 465 YKPLPSLLISFLLIIGACLCLTLPETLHKQL 495
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,212,180
Number of Sequences: 53049
Number of extensions: 766615
Number of successful extensions: 1864
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1863
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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