Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt16b12
(794 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 148 7e-38
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 148 7e-38
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 144 1e-36
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 144 1e-36
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 112 4e-27
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 112 4e-27
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 95 7e-22
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 87 2e-19
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 77 2e-16
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 26 0.46
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 26 0.46
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 26 0.46
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 25 0.81
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 24 1.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 24 1.9
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 2.5
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 22 5.7
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 10.0
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 10.0
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 10.0
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 10.0
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 10.0
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 10.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 10.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 10.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 10.0
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 148 bits (358), Expect = 7e-38
Identities = 76/222 (34%), Positives = 121/222 (54%), Gaps = 5/222 (2%)
Frame = -3
Query: 786 VDKMVTFFDHFDFDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTVTIDIKSDVATNAV 607
VDK++T+F+ FD N + ++ P K+RQ RLNHKPF I I +D A
Sbjct: 456 VDKLITYFEQFDTTINNGLLLEEQRNDDKPFLIKIRQYRLNHKPFNFHITINADKPMKAA 515
Query: 606 VKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDSLPMA 427
+++F+GPKYD + + ++ FYE+D ++ +N G ++ITR+S D F D P
Sbjct: 516 IRIFIGPKYDSHHKLIEIPEDLKYFYEIDNWMLDLNSGLNKITRNSLDCFFTMNDLEPSE 575
Query: 426 EIYKLLDQGKIPTDMFNSSDTM---PSRLMLPKGTYDGFPFQLFVFVYPY--EPTPKESE 262
Y+ ++ F ++ + P RL+LP+G +G PFQLF++V P E S
Sbjct: 576 IFYEKIETSLNSDKPFTYNERIFGFPGRLLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSR 635
Query: 261 PFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGE 136
+ D + FG+P D+P+ ++ PNM FK +L+YH+ E
Sbjct: 636 IWGGYKFDKRSFGFPLDKPLYDFNYEGPNMLFKDILIYHKDE 677
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 148 bits (358), Expect = 7e-38
Identities = 76/222 (34%), Positives = 121/222 (54%), Gaps = 5/222 (2%)
Frame = -3
Query: 786 VDKMVTFFDHFDFDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTVTIDIKSDVATNAV 607
VDK++T+F+ FD N + ++ P K+RQ RLNHKPF I I +D A
Sbjct: 456 VDKLITYFEQFDTTINNGLLLEEQRNDDKPFLIKIRQYRLNHKPFNFHITINADKPMKAA 515
Query: 606 VKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDSLPMA 427
+++F+GPKYD + + ++ FYE+D ++ +N G ++ITR+S D F D P
Sbjct: 516 IRIFIGPKYDSHHKLIEIPEDLKYFYEIDNWMLDLNSGLNKITRNSLDCFFTMNDLEPSE 575
Query: 426 EIYKLLDQGKIPTDMFNSSDTM---PSRLMLPKGTYDGFPFQLFVFVYPY--EPTPKESE 262
Y+ ++ F ++ + P RL+LP+G +G PFQLF++V P E S
Sbjct: 576 IFYEKIETSLNSDKPFTYNERIFGFPGRLLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSR 635
Query: 261 PFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGE 136
+ D + FG+P D+P+ ++ PNM FK +L+YH+ E
Sbjct: 636 IWGGYKFDKRSFGFPLDKPLYDFNYEGPNMLFKDILIYHKDE 677
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 144 bits (348), Expect = 1e-36
Identities = 81/222 (36%), Positives = 119/222 (53%), Gaps = 6/222 (2%)
Frame = -3
Query: 792 VKVDKMVTFFDHFDFDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTVTIDIKSDVATN 613
V VDK++T+FDHF+ N V + K+ K RQ RLNHKPFT I + SD
Sbjct: 453 VTVDKLITYFDHFESMLNNGVSI-QSHAKAKNTMIKARQYRLNHKPFTYHIVVNSDKNVK 511
Query: 612 AVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDSLP 433
+V++FLGPKYDE G L N+MNF ++D FV + G + I R+S + F D +P
Sbjct: 512 GMVRIFLGPKYDEFGHEVDLVHNYMNFMQMDEFVVNLKSGSNTIERNSHESVFVVPDEVP 571
Query: 432 MAEIYKLLDQGKIPTDMFNSSDT---MPSRLMLPKGTYDGFPFQLFVFVYPYEPT---PK 271
+Y L + ++ F S P RL+LPKG +G P+ + V V P++ +
Sbjct: 572 SDVLYNRLVVSEDGSETFKYSSQPYGFPERLLLPKGKKEGMPYNVLVVVSPFDDSNVVQI 631
Query: 270 ESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYH 145
+S + + D + G+P D+PV P N+ K+VLV+H
Sbjct: 632 DSPVWGRHIYDGRAMGFPLDKPVDPLLLVLSNIHVKEVLVHH 673
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 144 bits (348), Expect = 1e-36
Identities = 81/222 (36%), Positives = 119/222 (53%), Gaps = 6/222 (2%)
Frame = -3
Query: 792 VKVDKMVTFFDHFDFDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTVTIDIKSDVATN 613
V VDK++T+FDHF+ N V + K+ K RQ RLNHKPFT I + SD
Sbjct: 453 VTVDKLITYFDHFESMLNNGVSI-QSHAKAKNTMIKARQYRLNHKPFTYHIVVNSDKNVK 511
Query: 612 AVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDSLP 433
+V++FLGPKYDE G L N+MNF ++D FV + G + I R+S + F D +P
Sbjct: 512 GMVRIFLGPKYDEFGHEVDLVHNYMNFMQMDEFVVNLKSGSNTIERNSHESVFVVPDEVP 571
Query: 432 MAEIYKLLDQGKIPTDMFNSSDT---MPSRLMLPKGTYDGFPFQLFVFVYPYEPT---PK 271
+Y L + ++ F S P RL+LPKG +G P+ + V V P++ +
Sbjct: 572 SDVLYNRLVVSEDGSETFKYSSQPYGFPERLLLPKGKKEGMPYNVLVVVSPFDDSNVVQI 631
Query: 270 ESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYH 145
+S + + D + G+P D+PV P N+ K+VLV+H
Sbjct: 632 DSPVWGRHIYDGRAMGFPLDKPVDPLLLVLSNIHVKEVLVHH 673
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 112 bits (269), Expect = 4e-27
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 8/224 (3%)
Frame = -3
Query: 792 VKVDKMVTFFDHFDFDAFNTVYFSKEELKSSPH-GYKVRQPRLNHKPFTVTIDIKSDVAT 616
V +DK+ T+FD D N V + E K + K R+ +N++ FT I+I SD T
Sbjct: 456 VNIDKLYTYFDKCDTLINNAV--AVENFKGGMYLRLKARRACMNYERFTYKININSDKET 513
Query: 615 NAVVKMFLGPKYDENGFPFS-LEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDS 439
++++FLGP +DE L+ + F E+D F + PG + I R S++ F
Sbjct: 514 KGMMRIFLGPAFDEIKHDMVYLQKYFYLFMEMDRFAVTLRPGSNSIERQSSESPFTTSTI 573
Query: 438 LPMAEIYKLLDQGKIPTDMFNSSDTM---PSRLMLPKGTYDGFPFQLFVFVYPYEPTPKE 268
+P Y L++ ++ F S+ M P RL+LP+G +G +++F F+ + + +
Sbjct: 574 MPSDIFYDKLNKAIGGSEPFTYSEKMLGFPERLILPRGKPEGMRYKMFFFLSSMDESNTK 633
Query: 267 SEP---FKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYH 145
S + + D+K FG+P DRP+ F PNM+FK V +Y+
Sbjct: 634 SYEIPLYGKMTLDDKVFGFPLDRPMWAWNFTIPNMYFKDVFIYN 677
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 112 bits (269), Expect = 4e-27
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 8/224 (3%)
Frame = -3
Query: 792 VKVDKMVTFFDHFDFDAFNTVYFSKEELKSSPH-GYKVRQPRLNHKPFTVTIDIKSDVAT 616
V +DK+ T+FD D N V + E K + K R+ +N++ FT I+I SD T
Sbjct: 456 VNIDKLYTYFDKCDTLINNAV--AVENFKGGMYLRLKARRACMNYERFTYKININSDKET 513
Query: 615 NAVVKMFLGPKYDENGFPFS-LEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDS 439
++++FLGP +DE L+ + F E+D F + PG + I R S++ F
Sbjct: 514 KGMMRIFLGPAFDEIKHDMVYLQKYFYLFMEMDRFAVTLRPGSNSIERQSSESPFTTSTI 573
Query: 438 LPMAEIYKLLDQGKIPTDMFNSSDTM---PSRLMLPKGTYDGFPFQLFVFVYPYEPTPKE 268
+P Y L++ ++ F S+ M P RL+LP+G +G +++F F+ + + +
Sbjct: 574 MPSDIFYDKLNKAIGGSEPFTYSEKMLGFPERLILPRGKPEGMRYKMFFFLSSMDESNTK 633
Query: 267 SEP---FKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYH 145
S + + D+K FG+P DRP+ F PNM+FK V +Y+
Sbjct: 634 SYEIPLYGKMTLDDKVFGFPLDRPMWAWNFTIPNMYFKDVFIYN 677
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 95.1 bits (226), Expect = 7e-22
Identities = 50/120 (41%), Positives = 68/120 (56%)
Frame = -3
Query: 792 VKVDKMVTFFDHFDFDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTVTIDIKSDVATN 613
V VDK++T+FDHF+ N V + K+ K RQ RLNHKPFT I + SD
Sbjct: 79 VTVDKLITYFDHFESMLNNGVSI-QSHAKAKNTMIKARQYRLNHKPFTYHIVVNSDKNVK 137
Query: 612 AVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDSLP 433
+V++FLGPKYDE G L N+MNF ++D FV + G + I R+S + F +P
Sbjct: 138 GMVRIFLGPKYDEFGHEVDLVHNYMNFMQMDEFVVNLKSGSNTIERNSHESXFVVPTRVP 197
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 86.6 bits (205), Expect = 2e-19
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 8/193 (4%)
Frame = -3
Query: 792 VKVDKMVTFFDHF--DFDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTVTIDIKSDV- 622
V V ++VT F F D DA +++ + + + RL+H+P+ I + S+
Sbjct: 470 VDVSQLVTLFTDFYVDLDAVTGHQSQQQQEEQTQSRVRAHLKRLDHQPYQYKIAVHSEQN 529
Query: 621 ATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKED 442
AVV++FLGPK+D G P S+ N F ELD F+Q ++ G++ I R+S D
Sbjct: 530 VPGAVVRVFLGPKHDHQGRPISISKNQHLFVELDQFIQNLHAGENTIIRNSQQAPGQSPD 589
Query: 441 SLPMAEIYKLLDQGKIPTDMFNSSD-----TMPSRLMLPKGTYDGFPFQLFVFVYPYEPT 277
++I + ++ + F ++ + P+RL LPKG GFP Q V + P
Sbjct: 590 WPSTSQIQRGVNAAIRSQEPFYITEPHQIFSFPARLSLPKGQPQGFPLQFLVVISSSNPL 649
Query: 276 PKESEPFKSVVPD 238
+ P+ V+P+
Sbjct: 650 ---NVPYGPVIPE 659
Score = 43.6 bits (98), Expect = 2e-06
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -3
Query: 240 DNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGE 136
D KP G+P DRP+ PN+F K VLV+H+G+
Sbjct: 969 DGKPLGFPLDRPLSLGALSVPNIFVKDVLVFHQGQ 1003
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase protein.
Length = 693
Score = 77.0 bits (181), Expect = 2e-16
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Frame = -3
Query: 711 LKSSPHGYKV-RQPRLNHKPFTVTIDI--KSDVATNAVVKMFLGPKYDENGFPFSLEDNW 541
L +P G + R LNH F+ TI I +++ + V++F+GPK DE G PF+ +
Sbjct: 463 LDFTPRGAVLARFTHLNHADFSYTIVINNRNNTSMKGTVRIFIGPKEDERGLPFTFREQK 522
Query: 540 MNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDSLPMAEIYKLLDQGK-IPTDMFNSSDT 364
ELD F + PG++ I + ST + ++P ++ LD+ + I D D
Sbjct: 523 NLMIELDKFPITLQPGKNTIEQKSTKSSV----TIPFERTFRNLDENRPIGGDSLERFDF 578
Query: 363 M----PSRLMLPKGTYDGFPFQLFVFVYPY-EPTPKESEPF------------KSVVPDN 235
P +++PKG +GF +LFV V Y + +++EP PD
Sbjct: 579 CGCGWPQHMLIPKGNKEGFAMELFVMVSDYKDDRVEQNEPIGCKDASSYCGLRDRKYPDA 638
Query: 234 KPFGYPFDR 208
+ GYPFDR
Sbjct: 639 RAMGYPFDR 647
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.8 bits (54), Expect = 0.46
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +2
Query: 314 KGNPSYVPLGSISLEGIVSEEL 379
KG+ ++VPL ++S EG+ S++L
Sbjct: 587 KGDVAFVPLTALSEEGVQSKDL 608
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.8 bits (54), Expect = 0.46
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +2
Query: 314 KGNPSYVPLGSISLEGIVSEEL 379
KG+ ++VPL ++S EG+ S++L
Sbjct: 587 KGDVAFVPLTALSEEGVQSKDL 608
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.8 bits (54), Expect = 0.46
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +2
Query: 314 KGNPSYVPLGSISLEGIVSEEL 379
KG+ ++VPL ++S EG+ S++L
Sbjct: 587 KGDVAFVPLTALSEEGVQSKDL 608
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 25.0 bits (52), Expect = 0.81
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -3
Query: 564 PFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDF 460
PF+ + +LD ++ + GQ+ + R+ST+F
Sbjct: 512 PFNASPTTWSPADLDRALEAIRSGQTSVQRASTEF 546
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 792 VKVDKMVTFFDHFDFDAFNTVYFS 721
+ +DK+ FF F F N VY+S
Sbjct: 357 IYIDKVSRFFFPFSFLILNVVYWS 380
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.8 bits (49), Expect = 1.9
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 170 SSRRSWSTMKENYSPIYLTFLTIHQI 93
S+ +++ NY P+Y + I QI
Sbjct: 319 SNNYNYNNYNNNYKPLYYNIINIEQI 344
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 242 RTTNHSVIHSIAPFFLSTSNNLT 174
R + HSV+HS S+++N+T
Sbjct: 935 RLSGHSVLHSAQSVVASSASNVT 957
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 22.2 bits (45), Expect = 5.7
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 331 CTLRQHQPRR 360
CTLR+H+P R
Sbjct: 1 CTLRKHKPNR 10
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 399 FLGPRACRFRPSV 437
F+ P A RFRPS+
Sbjct: 156 FIPPNAYRFRPSL 168
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 399 FLGPRACRFRPSV 437
F+ P A RFRPS+
Sbjct: 156 FIPPNAYRFRPSL 168
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 399 FLGPRACRFRPSV 437
F+ P A RFRPS+
Sbjct: 156 FIPPNAYRFRPSL 168
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 399 FLGPRACRFRPSV 437
F+ P A RFRPS+
Sbjct: 387 FIPPNAYRFRPSL 399
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 399 FLGPRACRFRPSV 437
F+ P A RFRPS+
Sbjct: 387 FIPPNAYRFRPSL 399
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 399 FLGPRACRFRPSV 437
F+ P A RFRPS+
Sbjct: 387 FIPPNAYRFRPSL 399
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 399 FLGPRACRFRPSV 437
F+ P A RFRPS+
Sbjct: 387 FIPPNAYRFRPSL 399
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 399 FLGPRACRFRPSV 437
F+ P A RFRPS+
Sbjct: 376 FIPPNAYRFRPSL 388
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 10.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 399 FLGPRACRFRPSV 437
F+ P A RFRPS+
Sbjct: 389 FIPPNAYRFRPSL 401
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,437
Number of Sequences: 438
Number of extensions: 4502
Number of successful extensions: 62
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -