Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt16b02
         (849 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    28   0.31 
AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.       25   2.9  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   8.9  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   8.9  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 28.3 bits (60), Expect = 0.31
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 95  KVIQANIAAFLKTRPLHKNRTSFFCY 172
           K+++AN+ AF+K  P+H+    F  Y
Sbjct: 715 KILKANLRAFIKESPMHEITDFFHAY 740


>AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.
          Length = 113

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 299 RSQSNFLYEKI*DDICAHIMYSFTL 225
           +    +L E I  D+C H++Y F +
Sbjct: 6   QGNGKYLPEDIDSDLCTHVVYGFAV 30


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 494 ARVRVSNIVEFEPREL 541
           AR+ V+NI +FE REL
Sbjct: 794 ARIGVANIRQFEEREL 809


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 83  TLAIKVIQANIAAFLKTRPLH 145
           TLAI V+   ++AFL T  LH
Sbjct: 797 TLAILVMMEGLSAFLHTLRLH 817


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,189
Number of Sequences: 2352
Number of extensions: 11769
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)