SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt15p16
         (789 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15 pr...    31   6.3  
M74161-1|AAA79207.1|  942|Homo sapiens inositol polyphosphate 5-...    30   8.3  
BC042529-1|AAH42529.2|  736|Homo sapiens INPP5B protein protein.       30   8.3  
AL929472-5|CAH70079.1|  913|Homo sapiens inositol polyphosphate-...    30   8.3  
AL929472-4|CAH70080.1|  993|Homo sapiens inositol polyphosphate-...    30   8.3  
AL929472-1|CAH70076.1|  749|Homo sapiens inositol polyphosphate-...    30   8.3  
AL603790-4|CAH69929.1|  913|Homo sapiens inositol polyphosphate-...    30   8.3  
AL603790-3|CAH69928.1|  993|Homo sapiens inositol polyphosphate-...    30   8.3  
AL603790-1|CAH69926.1|  749|Homo sapiens inositol polyphosphate-...    30   8.3  

>AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15
           protein.
          Length = 2789

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 17/76 (22%), Positives = 38/76 (50%)
 Frame = -3

Query: 634 EEKEFKHIAVCTDSNRDVNLTALDYEVDKVLCVQEYRCSESFYKYEKNCFRSIMKYLRNL 455
           EEK+     +  D   +  ++ +D   + ++  QEY+ SES   + K+C + ++     +
Sbjct: 251 EEKQTSWKEIDNDFTNETKISPID---NYIVLHQEYKESESHNSFGKSCDKILITQELEI 307

Query: 454 SSNETLVIQNMNALTH 407
           + + T  I++ + L H
Sbjct: 308 TKSSTSTIKDKDELDH 323


>M74161-1|AAA79207.1|  942|Homo sapiens inositol polyphosphate
            5-phosphatase protein.
          Length = 942

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
 Frame = -3

Query: 652  LYQKILEEKEFKHIAVCTDSNRDVNLTALDYEVDKVLCVQEYRCSESF--YKYEKNCFRS 479
            L+Q+     EF+HI  C D+    NL+A ++ V + L +      E    Y    NC   
Sbjct: 799  LFQQPGLRSEFEHIRDCLDTGMIDNLSASNHSVAEALLLFLESLPEPVICYSTYHNCLEC 858

Query: 478  IMKYLRNLSSNETLVIQNMNALTHFIVSIL 389
               Y  +     TL I + N   H++++ L
Sbjct: 859  SGNYTASKQVISTLPIFHKNVF-HYLMAFL 887


>BC042529-1|AAH42529.2|  736|Homo sapiens INPP5B protein protein.
          Length = 736

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
 Frame = -3

Query: 652 LYQKILEEKEFKHIAVCTDSNRDVNLTALDYEVDKVLCVQEYRCSESF--YKYEKNCFRS 479
           L+Q+     EF+HI  C D+    NL+A ++ V + L +      E    Y    NC   
Sbjct: 593 LFQQPGLRSEFEHIRDCLDTGMIDNLSASNHSVAEALLLFLESLPEPVICYSTYHNCLEC 652

Query: 478 IMKYLRNLSSNETLVIQNMNALTHFIVSIL 389
              Y  +     TL I + N   H++++ L
Sbjct: 653 SGNYTASKQVISTLPIFHKNVF-HYLMAFL 681


>AL929472-5|CAH70079.1|  913|Homo sapiens inositol
            polyphosphate-5-phosphatase, 75kDa protein.
          Length = 913

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
 Frame = -3

Query: 652  LYQKILEEKEFKHIAVCTDSNRDVNLTALDYEVDKVLCVQEYRCSESF--YKYEKNCFRS 479
            L+Q+     EF+HI  C D+    NL+A ++ V + L +      E    Y    NC   
Sbjct: 770  LFQQPGLRSEFEHIRDCLDTGMIDNLSASNHSVAEALLLFLESLPEPVICYSTYHNCLEC 829

Query: 478  IMKYLRNLSSNETLVIQNMNALTHFIVSIL 389
               Y  +     TL I + N   H++++ L
Sbjct: 830  SGNYTASKQVISTLPIFHKNVF-HYLMAFL 858


>AL929472-4|CAH70080.1|  993|Homo sapiens inositol
            polyphosphate-5-phosphatase, 75kDa protein.
          Length = 993

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
 Frame = -3

Query: 652  LYQKILEEKEFKHIAVCTDSNRDVNLTALDYEVDKVLCVQEYRCSESF--YKYEKNCFRS 479
            L+Q+     EF+HI  C D+    NL+A ++ V + L +      E    Y    NC   
Sbjct: 850  LFQQPGLRSEFEHIRDCLDTGMIDNLSASNHSVAEALLLFLESLPEPVICYSTYHNCLEC 909

Query: 478  IMKYLRNLSSNETLVIQNMNALTHFIVSIL 389
               Y  +     TL I + N   H++++ L
Sbjct: 910  SGNYTASKQVISTLPIFHKNVF-HYLMAFL 938


>AL929472-1|CAH70076.1|  749|Homo sapiens inositol
           polyphosphate-5-phosphatase, 75kDa protein.
          Length = 749

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
 Frame = -3

Query: 652 LYQKILEEKEFKHIAVCTDSNRDVNLTALDYEVDKVLCVQEYRCSESF--YKYEKNCFRS 479
           L+Q+     EF+HI  C D+    NL+A ++ V + L +      E    Y    NC   
Sbjct: 606 LFQQPGLRSEFEHIRDCLDTGMIDNLSASNHSVAEALLLFLESLPEPVICYSTYHNCLEC 665

Query: 478 IMKYLRNLSSNETLVIQNMNALTHFIVSIL 389
              Y  +     TL I + N   H++++ L
Sbjct: 666 SGNYTASKQVISTLPIFHKNVF-HYLMAFL 694


>AL603790-4|CAH69929.1|  913|Homo sapiens inositol
            polyphosphate-5-phosphatase, 75kDa protein.
          Length = 913

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
 Frame = -3

Query: 652  LYQKILEEKEFKHIAVCTDSNRDVNLTALDYEVDKVLCVQEYRCSESF--YKYEKNCFRS 479
            L+Q+     EF+HI  C D+    NL+A ++ V + L +      E    Y    NC   
Sbjct: 770  LFQQPGLRSEFEHIRDCLDTGMIDNLSASNHSVAEALLLFLESLPEPVICYSTYHNCLEC 829

Query: 478  IMKYLRNLSSNETLVIQNMNALTHFIVSIL 389
               Y  +     TL I + N   H++++ L
Sbjct: 830  SGNYTASKQVISTLPIFHKNVF-HYLMAFL 858


>AL603790-3|CAH69928.1|  993|Homo sapiens inositol
            polyphosphate-5-phosphatase, 75kDa protein.
          Length = 993

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
 Frame = -3

Query: 652  LYQKILEEKEFKHIAVCTDSNRDVNLTALDYEVDKVLCVQEYRCSESF--YKYEKNCFRS 479
            L+Q+     EF+HI  C D+    NL+A ++ V + L +      E    Y    NC   
Sbjct: 850  LFQQPGLRSEFEHIRDCLDTGMIDNLSASNHSVAEALLLFLESLPEPVICYSTYHNCLEC 909

Query: 478  IMKYLRNLSSNETLVIQNMNALTHFIVSIL 389
               Y  +     TL I + N   H++++ L
Sbjct: 910  SGNYTASKQVISTLPIFHKNVF-HYLMAFL 938


>AL603790-1|CAH69926.1|  749|Homo sapiens inositol
           polyphosphate-5-phosphatase, 75kDa protein.
          Length = 749

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
 Frame = -3

Query: 652 LYQKILEEKEFKHIAVCTDSNRDVNLTALDYEVDKVLCVQEYRCSESF--YKYEKNCFRS 479
           L+Q+     EF+HI  C D+    NL+A ++ V + L +      E    Y    NC   
Sbjct: 606 LFQQPGLRSEFEHIRDCLDTGMIDNLSASNHSVAEALLLFLESLPEPVICYSTYHNCLEC 665

Query: 478 IMKYLRNLSSNETLVIQNMNALTHFIVSIL 389
              Y  +     TL I + N   H++++ L
Sbjct: 666 SGNYTASKQVISTLPIFHKNVF-HYLMAFL 694


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,351,482
Number of Sequences: 237096
Number of extensions: 1822132
Number of successful extensions: 7339
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7339
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -