Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15p14
(862 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 288 1e-76
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 284 2e-75
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 283 4e-75
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 282 7e-75
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 253 5e-66
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 248 2e-64
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 243 4e-63
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 242 7e-63
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 242 9e-63
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 232 1e-59
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 225 1e-57
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 223 5e-57
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 219 1e-55
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 213 5e-54
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 211 1e-53
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 208 1e-52
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 203 5e-51
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 200 4e-50
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 198 1e-49
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 188 1e-46
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 182 1e-44
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 117 9e-43
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 167 3e-40
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 167 4e-40
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 166 5e-40
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 166 7e-40
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 165 1e-39
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 165 1e-39
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 163 7e-39
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 162 9e-39
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 161 2e-38
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 161 2e-38
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 161 3e-38
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 159 1e-37
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 158 1e-37
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 157 3e-37
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 157 3e-37
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 157 4e-37
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 155 1e-36
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 155 2e-36
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 155 2e-36
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 152 1e-35
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 151 2e-35
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 150 4e-35
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 150 5e-35
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 147 4e-34
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 147 4e-34
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 145 1e-33
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 143 4e-33
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 142 1e-32
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 141 2e-32
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 141 2e-32
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 139 1e-31
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 138 1e-31
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 138 2e-31
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 137 3e-31
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 136 5e-31
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 135 1e-30
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 135 1e-30
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 134 2e-30
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 132 1e-29
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 132 1e-29
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 132 1e-29
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 128 1e-28
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 126 5e-28
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 126 5e-28
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 126 7e-28
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 126 9e-28
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 123 5e-27
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 121 3e-26
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 120 6e-26
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 117 4e-25
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 117 4e-25
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 114 2e-24
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 113 5e-24
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 110 5e-23
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 109 9e-23
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 102 1e-20
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 101 2e-20
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 97 5e-19
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 92 2e-17
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 85 2e-15
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 79 1e-13
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 76 1e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 75 3e-12
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 70 7e-11
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 69 1e-10
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 68 3e-10
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 68 4e-10
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 64 4e-09
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 62 1e-08
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 61 4e-08
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 59 1e-07
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 57 7e-07
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 56 9e-07
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 56 2e-06
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 3e-06
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 54 6e-06
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 54 6e-06
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 52 2e-05
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 50 6e-05
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 48 3e-04
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 46 0.001
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 46 0.002
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 44 0.004
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 43 0.011
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 43 0.011
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 40 0.081
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 40 0.11
UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46; N... 38 0.43
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 37 0.57
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 37 0.57
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 37 0.57
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 36 1.3
UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvi... 35 3.0
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 3.0
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 288 bits (707), Expect = 1e-76
Identities = 138/218 (63%), Positives = 162/218 (74%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVYILILPGFGIISH+++ GKKE F GFIV
Sbjct: 228 PILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIV 287
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FL
Sbjct: 288 WAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFL 347
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
FTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS ++ +PLFTG +LNS
Sbjct: 348 FTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNS 407
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
KI F +FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 408 VWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
Score = 37.5 bits (83), Expect = 0.43
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2
Query: 849 LKYIIFDPAGGGDPILYQH 793
L FDPAGGGDPILYQH
Sbjct: 215 LNTTFFDPAGGGDPILYQH 233
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 284 bits (696), Expect = 2e-75
Identities = 136/218 (62%), Positives = 161/218 (73%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVYILILPGFG+ISH+++ GKKE F GFIV
Sbjct: 228 PILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIV 287
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FL
Sbjct: 288 WAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFL 347
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
FTVGGLTG++LANSSIDI LHDTYYVVAHFHYVLS ++ +PLFTG +L+
Sbjct: 348 FTVGGLTGIVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLHD 407
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
KI F +FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 408 TWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
Score = 37.5 bits (83), Expect = 0.43
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2
Query: 849 LKYIIFDPAGGGDPILYQH 793
L FDPAGGGDPILYQH
Sbjct: 215 LNTTFFDPAGGGDPILYQH 233
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 283 bits (694), Expect = 4e-75
Identities = 134/218 (61%), Positives = 163/218 (74%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVYILILPGFG+ISHI++ GKKE F GFIV
Sbjct: 228 PILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIV 287
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L LGF+FL
Sbjct: 288 WAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFL 347
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
FTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS I+ +PLF+G +L+
Sbjct: 348 FTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQ 407
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
KI F +FIGVN+TFFPQHFLGL+G+PRRYSDYPD
Sbjct: 408 TYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPD 445
Score = 37.5 bits (83), Expect = 0.43
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2
Query: 849 LKYIIFDPAGGGDPILYQH 793
L FDPAGGGDPILYQH
Sbjct: 215 LNTTFFDPAGGGDPILYQH 233
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 282 bits (692), Expect = 7e-75
Identities = 136/218 (62%), Positives = 159/218 (72%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVYILILPGFGIISH+I E GKKETF GFIV
Sbjct: 212 PILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKETFGMLGMIYAMLTIGFLGFIV 271
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
AHH+FT+G+D+DTRAYFTSAT+IIA+PTGIKIF +AT G ++ N IL +GF+FL
Sbjct: 272 WAHHMFTIGMDVDTRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFL 331
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
FTVGGLTGV+L+NSS+D+ LHDTYY VAHFHYVLS I +P+F GL +N
Sbjct: 332 FTVGGLTGVVLSNSSVDVVLHDTYYGVAHFHYVLSMGAVFSILGGFIYWFPMFFGLMMNE 391
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
Y LKI F+ FIGVN+ FFPQHFLGL+G+PRRYSDYPD
Sbjct: 392 YFLKIHFYLTFIGVNLIFFPQHFLGLSGMPRRYSDYPD 429
Score = 35.9 bits (79), Expect = 1.3
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -2
Query: 834 FDPAGGGDPILYQH 793
FDP+GGGDPILYQH
Sbjct: 204 FDPSGGGDPILYQH 217
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 253 bits (619), Expect = 5e-66
Identities = 125/185 (67%), Positives = 142/185 (76%)
Frame = -1
Query: 769 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIFTVGIDIDT 590
EVYILILPGFG+ISHIISQE GKKE F GF+V AHH+FTVG+D+DT
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Query: 589 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 410
RAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LGFVFLFTVGGLTGV+LANS
Sbjct: 215 RAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGGLTGVVLANS 274
Query: 409 SIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQFFTIFIGV 230
SIDI LHDTYYVVAHFHYVLS + +PLFTG++LN++ LKIQF +FIGV
Sbjct: 275 SIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGIVQWFPLFTGVTLNNFFLKIQFIIMFIGV 334
Query: 229 NITFF 215
N+TFF
Sbjct: 335 NLTFF 339
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 248 bits (606), Expect = 2e-64
Identities = 122/218 (55%), Positives = 147/218 (67%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVYILI+PGFGIIS IS K F GF+V
Sbjct: 229 PILYQHLFWFFGHPEVYILIIPGFGIISTTISAN-SNKSVFGYLGMVYAMCSIGILGFVV 287
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
+HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++L LGFVF+
Sbjct: 288 WSHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFM 347
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
FT+GGL+GV+LAN+S+DI HDTYYVVAHFHYVLS P GL N
Sbjct: 348 FTIGGLSGVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKILGLDYNL 407
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
K F+ +F GVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 408 LYSKAHFWVLFTGVNLTFFPQHFLGLQGMPRRISDYPD 445
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 243 bits (595), Expect = 4e-63
Identities = 122/218 (55%), Positives = 148/218 (67%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVYILILPGFG+ISHI+S +K F GFIV
Sbjct: 236 PILYQHLFWFFGHPEVYILILPGFGMISHIVSTF-SRKPVFGYIGMVYAMVSIGVLGFIV 294
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
AHH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF +ATI I+ +L +GF+FL
Sbjct: 295 WAHHMYTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFL 354
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
FT+GGLTG++LANS +DI+LHDTYYVVAHFHYVLS + TGL
Sbjct: 355 FTIGGLTGIVLANSGLDISLHDTYYVVAHFHYVLSMGAVFAIFAGFYYWFGKITGLQYPE 414
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
+ +I F++ FIGVN+TF P HFLGLAG+PRR DYPD
Sbjct: 415 TLGQIHFWSTFIGVNLTFMPMHFLGLAGMPRRIPDYPD 452
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 242 bits (593), Expect = 7e-63
Identities = 122/218 (55%), Positives = 145/218 (66%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVYILILPGFGIISHI+S GK F GF+V
Sbjct: 231 PILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSGKP-VFGYLGMVYAMISIGVLGFLV 289
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L +GF+FL
Sbjct: 290 WAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFL 349
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
FT+GGLTG++LANS +DI LHDTYYVVAHFHYVLS G +
Sbjct: 350 FTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPE 409
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
+ +I F+ F GVN+TFFP HFLGL+G+PRR DYPD
Sbjct: 410 TLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPD 447
Score = 37.1 bits (82), Expect = 0.57
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2
Query: 834 FDPAGGGDPILYQH 793
FDPAGGGDPILYQH
Sbjct: 223 FDPAGGGDPILYQH 236
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 242 bits (592), Expect = 9e-63
Identities = 119/212 (56%), Positives = 147/212 (69%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FFGHPEVYILI+PGFGIIS +IS K F GFIV +HH++
Sbjct: 261 LFWFFGHPEVYILIIPGFGIISTVISAN-SNKNVFGYLGMVYAMMSIGLLGFIVWSHHMY 319
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
TVG+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++ +L LGFV +FT+GGL
Sbjct: 320 TVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTIGGL 379
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
+GV+LAN+S +I HDTYYVVAHFHYVLS P GLS ++ KI
Sbjct: 380 SGVVLANASENIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKIIGLSYDTKASKIH 439
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
F+ +FIGVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 440 FWILFIGVNLTFFPQHFLGLQGMPRRISDYPD 471
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 232 bits (567), Expect = 1e-59
Identities = 111/218 (50%), Positives = 143/218 (65%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVYI+ILPGFGIIS I+S +K F GF+V
Sbjct: 271 PELYQHLFWFFGHPEVYIMILPGFGIISQIVSTF-SRKPVFGYLGMAYAMVAIGVVGFVV 329
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
AHH+FT G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++ ++ LGF+FL
Sbjct: 330 WAHHMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFL 389
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
FTVGG+TGV+LAN +D LHDTYYVVAHFHYVLS +P +G N
Sbjct: 390 FTVGGVTGVVLANGGVDDVLHDTYYVVAHFHYVLSLGAVFGLFAGFYYWFPKMSGKMYNE 449
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
++ ++ F+ F GVN+ FFP HFLGL+G+PRRY DYP+
Sbjct: 450 FLGQLHFWVFFAGVNLLFFPMHFLGLSGMPRRYPDYPE 487
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 225 bits (550), Expect = 1e-57
Identities = 110/215 (51%), Positives = 138/215 (64%), Gaps = 3/215 (1%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FFGHPEVYILILP FG+ISHI+ + K F GF+V HH+F
Sbjct: 237 LFWFFGHPEVYILILPAFGVISHILCRSSAKLHVFGKIGMSWASMGIAWMGFLVWGHHMF 296
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY---NPNIL*RLGFVFLFTV 443
G+DIDTRAYFT+AT++IAVPTG+K+F LATI G + +P+ +G V LFT+
Sbjct: 297 VAGLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVLLFTI 356
Query: 442 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYIL 263
GGLTGVILAN+++ LHD+YYVVAHFHYVLS +P +TG+ ++
Sbjct: 357 GGLTGVILANAALSTLLHDSYYVVAHFHYVLSMGAVFAIFGGFWFWFPFWTGMVPRKDLV 416
Query: 262 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
F FIGVN TFFP H++GL G+PRRY DYPD
Sbjct: 417 LTHFMLTFIGVNFTFFPMHWMGLTGMPRRYQDYPD 451
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 223 bits (545), Expect = 5e-57
Identities = 108/183 (59%), Positives = 134/183 (73%)
Frame = -1
Query: 784 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIFTVG 605
FFGHPEVYILILPGFG+ISHI++ GKKE F GFIV AHH+FTVG
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 604 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 425
+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LGF+FLFTVGGLTG+
Sbjct: 62 MDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGLTGI 121
Query: 424 ILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQFFT 245
ILANSS+DI LHDTYYVVAHFHYVLS ++ +PLF+G +L++ KI F
Sbjct: 122 ILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLHNTWTKIHFGV 181
Query: 244 IFI 236
+F+
Sbjct: 182 MFM 184
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 219 bits (534), Expect = 1e-55
Identities = 111/213 (52%), Positives = 138/213 (64%), Gaps = 1/213 (0%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FFGHPEVYILILPGFG++SHII+ KK F GFIV AHH++
Sbjct: 238 LFWFFGHPEVYILILPGFGLVSHIIATF-SKKRVFGHVPMIAAMLMIGLIGFIVWAHHMY 296
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLFTVGG 437
T GID T+AYFT+AT++IA+PTGIK+F +AT+ G I Y P GFV LFT+GG
Sbjct: 297 TSGIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFTIGG 355
Query: 436 LTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKI 257
+TG+IL+N+ ID ++HDT+YVV HFHYVLS + TGLS + + +
Sbjct: 356 ITGIILSNAGIDTSIHDTHYVVGHFHYVLSMGAVFAIYGGFYYWWGKMTGLSYSESLGQA 415
Query: 256 QFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
F+ FIGVN TFFP HFLG G+PRR DYPD
Sbjct: 416 HFWMTFIGVNFTFFPMHFLGSGGMPRRIPDYPD 448
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 213 bits (520), Expect = 5e-54
Identities = 111/218 (50%), Positives = 129/218 (59%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVYILILPGFG+ISH+++ GKKE F GFIV
Sbjct: 229 PILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMLSIGFLGFIV 288
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
A LAT+HG I ++P +L LGF+FL
Sbjct: 289 WAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWLATLHGGTIKWDPPMLWALGFIFL 348
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
FTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS + +PLFTG +LNS
Sbjct: 349 FTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNS 408
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
K F +F GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 409 AWAKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDYPD 446
Score = 37.5 bits (83), Expect = 0.43
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2
Query: 849 LKYIIFDPAGGGDPILYQH 793
L FDPAGGGDPILYQH
Sbjct: 216 LNTTFFDPAGGGDPILYQH 234
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 211 bits (516), Expect = 1e-53
Identities = 100/173 (57%), Positives = 126/173 (72%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FFGHPEVYILILPGFG+ISH+I+ GK+E F GF+V AHH+F
Sbjct: 211 LFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGMVYAMIAIGVLGFLVWAHHMF 270
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
TVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ + + + LGFVFLFT+GGL
Sbjct: 271 TVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVFLFTLGGL 330
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 275
TG++LANSSID+ LHDTYYVVAHFHYVLS + +PLF+G +L+
Sbjct: 331 TGIVLANSSIDVVLHDTYYVVAHFHYVLSMGAVFAIFAGFTHWFPLFSGYNLH 383
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 208 bits (508), Expect = 1e-52
Identities = 103/218 (47%), Positives = 135/218 (61%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P +F FFGHPEVYI+ILP FG+ISHI++ KK F GF+V
Sbjct: 334 PILFQHIFWFFGHPEVYIVILPAFGVISHIVATF-SKKPIFGYLPMVYALVAIGGLGFVV 392
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
AHH++TVG+ + +AYF AT++IAVPTGIKIF +AT+ I++ ++ LGF+FL
Sbjct: 393 WAHHMYTVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFL 452
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
FT+GG TG+IL+ + +D HDTYYVVAHFHYV+S +G
Sbjct: 453 FTLGGTTGIILSQAGVDRAYHDTYYVVAHFHYVMSLGAVFGIFAAVYYWIGKMSGRQYPE 512
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
+ ++ F+ FIG NITFFPQHFLG G+PRRY DYPD
Sbjct: 513 WAGQVHFWVFFIGTNITFFPQHFLGRQGMPRRYIDYPD 550
Score = 35.5 bits (78), Expect = 1.7
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -2
Query: 834 FDPAGGGDPILYQH 793
FDPAGGGDPIL+QH
Sbjct: 326 FDPAGGGDPILFQH 339
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 203 bits (495), Expect = 5e-51
Identities = 96/151 (63%), Positives = 114/151 (75%)
Frame = -1
Query: 610 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 431
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 430 GVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQF 251
G++LANSS+DI LHDTYYVVAHFHYVLS + +PLFTG +LN+ K F
Sbjct: 356 GIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNNAWAKAHF 415
Query: 250 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
+F GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 416 GVMFTGVNLTFFPQHFLGLAGMPRRYSDYPD 446
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 200 bits (488), Expect = 4e-50
Identities = 100/218 (45%), Positives = 127/218 (58%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVY++ILP FGIIS + K F G V
Sbjct: 238 PLLYQHLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQTSMTFASIWIAVLGTSV 297
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
HH++T G+DIDTR YF++AT+IIA+P+ +KIF L T G+ P F+FL
Sbjct: 298 WGHHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFL 357
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
FTVGGL+G+IL+ +S+DI LHDTYYVVAHFHY LS P G+S +S
Sbjct: 358 FTVGGLSGIILSAASLDIILHDTYYVVAHFHYTLSLGAIYGIFCGFCLWLPYMYGISFDS 417
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
++ F F+G N+TFFP HF GL G+PR+ DYPD
Sbjct: 418 VMMMAVFVCFFVGTNMTFFPMHFAGLQGMPRKILDYPD 455
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 198 bits (484), Expect = 1e-49
Identities = 96/163 (58%), Positives = 119/163 (73%), Gaps = 2/163 (1%)
Frame = -1
Query: 640 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPNIL*RL 467
FIV A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N + + L
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWAL 309
Query: 466 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTG 287
GF+FLFT+GGLTG++L+NSS+DI LHDTYYVVAHFHYVLS + TG
Sbjct: 310 GFIFLFTIGGLTGIVLSNSSLDILLHDTYYVVAHFHYVLSMGAVFAIFGGFYLWFGKITG 369
Query: 286 LSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
+ I F+ +F+GVNITFFPQHFLGLAG+PRRY+DYPD
Sbjct: 370 YAYKDIYGLIHFWLMFLGVNITFFPQHFLGLAGLPRRYADYPD 412
Score = 37.1 bits (82), Expect = 0.57
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2
Query: 834 FDPAGGGDPILYQH 793
FDPAGGGDPILYQH
Sbjct: 221 FDPAGGGDPILYQH 234
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 188 bits (459), Expect = 1e-46
Identities = 96/217 (44%), Positives = 128/217 (58%), Gaps = 1/217 (0%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVY+LILPGFGI+SHI +F G +V
Sbjct: 318 PILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLSNNDSSFGYYGLICAMASIVCLGSVV 377
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVF 455
HH+F VG D T +F+S T+II VPTGIK+F L ++ + +P + +GF+F
Sbjct: 378 WGHHMFMVGFDSLTGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIF 437
Query: 454 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 275
LFTVGG+TGV L+ S++DI HDT++VVAHFHYVLS + +P G SLN
Sbjct: 438 LFTVGGVTGVALSASALDILFHDTWFVVAHFHYVLSLGSYSSIVIMLVWWWPFIVGYSLN 497
Query: 274 SYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
Y+L+ + +G N+ FFP H+LG+ G+PRR S Y
Sbjct: 498 KYLLQGHWLLSMVGFNLCFFPMHYLGIHGLPRRVSCY 534
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 182 bits (442), Expect = 1e-44
Identities = 97/220 (44%), Positives = 127/220 (57%), Gaps = 2/220 (0%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVYILILP FG+ISH+IS + F G +V
Sbjct: 234 PILYQHLFWFFGHPEVYILILPAFGVISHVISTNYCRN-LFGNQSMILAMGCIAVLGSLV 292
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVF 455
HH++T G+++DTRAYFTS TI+I++PTG K+F + T + + + L L F+
Sbjct: 293 WVHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFIC 352
Query: 454 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSL- 278
FT GG TGVIL N++ID+ LHDTYYV+AHFH+VLS F G +L
Sbjct: 353 TFTFGGTTGVILGNAAIDVALHDTYYVIAHFHFVLSIGAIIGLFTTVSAFQDNFFGKNLR 412
Query: 277 NSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
+ I+ + F+GV +TF P HFLG +PRR DYPD
Sbjct: 413 ENSIVILWSMLFFVGVILTFLPMHFLGFNVMPRRIPDYPD 452
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 117 bits (282), Expect(2) = 9e-43
Identities = 60/100 (60%), Positives = 73/100 (73%), Gaps = 14/100 (14%)
Frame = -1
Query: 625 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 446
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFT 408
Query: 445 VGGL--------------TGVILANSSIDITLHDTYYVVA 368
+GGL +GV+LAN+S+DI HDTYYVVA
Sbjct: 409 IGGLLNHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 79.8 bits (188), Expect(2) = 9e-43
Identities = 37/77 (48%), Positives = 46/77 (59%)
Frame = -1
Query: 388 DTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQ 209
+T + HFHYVLS P G + + + K+QF+ +FIGVN TFFPQ
Sbjct: 476 ETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFWLLFIGVNATFFPQ 535
Query: 208 HFLGLAGIPRRYSDYPD 158
HFLGL G+PRR SDYPD
Sbjct: 536 HFLGLQGMPRRISDYPD 552
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGK 701
P LF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 254 PILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 167 bits (406), Expect = 3e-40
Identities = 91/206 (44%), Positives = 116/206 (56%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FGHPEVYILILP FGI S +I +K F GF+V HH+F
Sbjct: 243 LFWIFGHPEVYILILPAFGIFSEVIPVF-ARKRLFGYSSMVFAIVLIGFLGFMVWVHHMF 301
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
T G+ A F AT+ IA+PTGIKIF L TI G + Y +L + F+ F +GG+
Sbjct: 302 TTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVLGGV 361
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
TGV+LA ++ D HDTY+VVAHFHYV+ +P G L+ + KI
Sbjct: 362 TGVMLAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLLAGVHFWWPKMFGKILHETMGKIS 421
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRR 176
F FIG ++TFF QHF+GL G+PRR
Sbjct: 422 FVLFFIGFHLTFFIQHFVGLMGMPRR 447
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 167 bits (405), Expect = 4e-40
Identities = 89/211 (42%), Positives = 120/211 (56%)
Frame = -1
Query: 790 F*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIFT 611
F FGHPEVYILILPGFG+IS +I +K + G+ V AHH+F
Sbjct: 254 FWIFGHPEVYILILPGFGMISEVIPVF-SRKPIYGYTFVAASSVAIVLLGYGVWAHHMFA 312
Query: 610 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 431
VG+ + +F +++IA+PTGIK+F AT+ G +I +N ++ + F+ F +GGLT
Sbjct: 313 VGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFVIGGLT 372
Query: 430 GVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQF 251
G++ A ID L DTY+VVAHFHYVL +P TG LN I +QF
Sbjct: 373 GIMFAAVPIDWQLTDTYFVVAHFHYVLIGGLVFALFSAAYYWFPKMTGRMLNERIGILQF 432
Query: 250 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
+ +G N+TF QHFLGL G+PRR Y D
Sbjct: 433 WLWVLGFNMTFMVQHFLGLMGMPRRVYTYAD 463
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 166 bits (404), Expect = 5e-40
Identities = 89/210 (42%), Positives = 121/210 (57%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FFGHPEVYILILP GIIS ++ +K F GF+V AHH+F
Sbjct: 252 LFWFFGHPEVYILILPTMGIISEVLPTF-SRKPIFGYAFVAYSGVAIGFLGFLVWAHHMF 310
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
VG+ A+F +A+ +IAVPTG+KIF LAT+ +N ++L +GF+ +F +GG+
Sbjct: 311 AVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFIIGGI 370
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
+GV LA+ I++ D+YYVVAH HYVL +P TG L+ + K Q
Sbjct: 371 SGVTLASPPINVQQTDSYYVVAHMHYVLFGGAIQGIFAGIFYWFPKMTGRMLDERLGKWQ 430
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
F+ + I N+TFFP H G AG+PRR Y
Sbjct: 431 FWLMLISFNLTFFPMHLSGNAGMPRRIYTY 460
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 166 bits (403), Expect = 7e-40
Identities = 89/216 (41%), Positives = 122/216 (56%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P + LF +GHPEVYI+ILP FGI S IIS +K+ F F+V
Sbjct: 268 PMLWANLFWIWGHPEVYIVILPAFGIFSEIISSF-ARKQLFGYKAMVGSIIAISVLSFLV 326
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
HH FT+G ++F+ T+ I++PTG+KIF L T++ +I++ +L L F+
Sbjct: 327 WTHHFFTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPN 386
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
F +GG+TGV+LA ++ D H+TY++V+HFHYVL I YP G LN
Sbjct: 387 FVIGGVTGVMLAMAAADYQYHNTYFLVSHFHYVLIAGTVFACFAGFIFWYPKMFGHKLNE 446
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
I K F+ IG NI FFPQ+FLGL G+PRR Y
Sbjct: 447 RIGKWFFWIFMIGFNICFFPQYFLGLQGMPRRIYTY 482
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 165 bits (402), Expect = 1e-39
Identities = 85/218 (38%), Positives = 117/218 (53%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVYI+ LP FGI+S +IS +K F F+V
Sbjct: 268 PLLFQHLFWFFGHPEVYIVALPAFGIVSDLISTH-ARKNIFGYRMMVWAIVAIGALSFVV 326
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
AHH++ G+ +F + T+IIA+PT IK++ + T+ I+ +L LGF+
Sbjct: 327 WAHHMYVSGMYPYFGFFFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLFALGFIIT 386
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
F GGLTG+ L N +D+ L DT +VVAHFH V+ + YP TG LN
Sbjct: 387 FVNGGLTGLFLGNVVVDVPLSDTMFVVAHFHMVMGVAPIMVVLGAIYHWYPKVTGRMLND 446
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
+ K F+ F+G + FFP H+LGL G+PRRY + D
Sbjct: 447 VLGKFHFWVTFLGAYLIFFPMHYLGLLGVPRRYFELGD 484
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 165 bits (401), Expect = 1e-39
Identities = 89/210 (42%), Positives = 119/210 (56%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF F+ HP VYI+ILP FG+IS +I +K F G IV AHH+F
Sbjct: 245 LFWFYSHPAVYIMILPFFGVISEVIPVH-ARKPIFGYRAIAYSSLAISFLGLIVWAHHMF 303
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
T G R +F + T++IAVPTGIKIF T+ G +I N +L GF+ F +GGL
Sbjct: 304 TSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFMIGGL 363
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
TGV++A+ DI +HDTY+VV HFHYVL + +P TG +N + ++
Sbjct: 364 TGVMVASVPFDIHVHDTYFVVGHFHYVLFGGSAFALFSGVYHWFPKMTGRMVNEPLGRLH 423
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
F FIG+N+TF P H LGL G+ RR + Y
Sbjct: 424 FILTFIGMNLTFMPMHELGLMGMNRRIALY 453
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 163 bits (395), Expect = 7e-39
Identities = 87/227 (38%), Positives = 126/227 (55%)
Frame = -1
Query: 838 HF*SCXRRRPNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 659
HF + P LF FFGHPEVYI+ +P G++S II ++ F
Sbjct: 241 HFFTAASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSIIITFT-QRPIFGYIPIVLSIV 299
Query: 658 XXXXXGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 479
GF + HH+FT G+ +FT+++ +IA+P+G++IF +AT+ G++ +
Sbjct: 300 AIGFIGFGLWVHHMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPL 359
Query: 478 L*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YP 299
L LGF +F +GGL+GV++A+ D+ HDTY+VVAHFHYVL YP
Sbjct: 360 LHVLGFFLIFIIGGLSGVMVASVPFDMQAHDTYFVVAHFHYVLIGGAVFPLLGGLYYWYP 419
Query: 298 LFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
FTG ++ + K+ F+ F G N+TFFP H LGL G+PRR Y D
Sbjct: 420 KFTGRMMSERLGKVAFWVTFAGFNLTFFPMHKLGLEGMPRRVYTYLD 466
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 162 bits (394), Expect = 9e-39
Identities = 80/145 (55%), Positives = 101/145 (69%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVYILI+PGFG++SHI+S GK F GF+V
Sbjct: 228 PILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSGKP-VFGYLGMVYAMFSIGILGFLV 286
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
+HH++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT++G + +L LGF+ L
Sbjct: 287 WSHHMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIAL 346
Query: 451 FTVGGLTGVILANSSIDITLHDTYY 377
FT+GGLTGVILAN+S+D+ LHD Y
Sbjct: 347 FTIGGLTGVILANASLDVALHDLKY 371
Score = 35.9 bits (79), Expect = 1.3
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -2
Query: 834 FDPAGGGDPILYQH 793
+DPAGGGDPILYQH
Sbjct: 220 YDPAGGGDPILYQH 233
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 161 bits (392), Expect = 2e-38
Identities = 88/213 (41%), Positives = 124/213 (58%), Gaps = 2/213 (0%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
+F FFGHPEVYI++LP FG+IS I+ + G + F G V AHH+F
Sbjct: 237 IFWFFGHPEVYIILLPVFGLISTIV-EVIGFRCVFSTVAMIYSMILIAILGMFVWAHHMF 295
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
VG+D+D+RAYF +I+I +PT +K+F + + T + + + F+F+F +G +
Sbjct: 296 VVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAV 355
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
TG+ L+N IDI LHDTY+VV HFHYVLS I + L L + Y+ +
Sbjct: 356 TGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFI--HFLAKWLPIELYLFWMF 413
Query: 253 FF--TIFIGVNITFFPQHFLGLAGIPRRYSDYP 161
+F T+FIG N+ FFP H LG+ PRR SDYP
Sbjct: 414 YFISTLFIGSNMLFFPMHSLGMYAFPRRISDYP 446
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 161 bits (391), Expect = 2e-38
Identities = 84/210 (40%), Positives = 116/210 (55%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FFGHPEVYI++LP GIIS+I+ + G++ F F V AHH+F
Sbjct: 319 LFWFFGHPEVYIIVLPPMGIISYILPRFSGRR-LFGFKFVVYSTLAIGVLSFGVWAHHMF 377
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
G+D RA F + ++ IAVP+ +K F + T+ I +L +GFV F +GG+
Sbjct: 378 ATGLDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLFSVGFVANFILGGV 437
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
TGV LA+ +D+ LH TYYVV HFHY++ +PL+TG + K+
Sbjct: 438 TGVFLASIPVDLVLHATYYVVGHFHYIVMGAIAFAGFAGIYYWFPLYTGRMYQRTLGKMH 497
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
F+ IG NITFF LG G+PRRY+ Y
Sbjct: 498 FWLSMIGTNITFFAMILLGYGGMPRRYATY 527
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 161 bits (390), Expect = 3e-38
Identities = 80/213 (37%), Positives = 117/213 (54%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF F GHPEVYI+++P GI S +I+ +K F FIV
Sbjct: 290 PVLFQHLFWFLGHPEVYIVLIPALGITSEVIATN-ARKPIFGYKAMIGSILGIAVLSFIV 348
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
AHH+F G++ + F T+IIAVP+ +K F + T+ I + P ++ +G V +
Sbjct: 349 WAHHMFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSM 408
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
F GG+TG+IL N+++DI LHDTYYVVAHFH V+ + +P G ++
Sbjct: 409 FISGGVTGIILGNNAMDIQLHDTYYVVAHFHLVMGSASFFGMMAGVYHWFPKMFGRMMDE 468
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRY 173
+ I F+ F+G + FFP H++G+AG PRRY
Sbjct: 469 KLGYIHFWFTFVGAYLVFFPMHYIGIAGFPRRY 501
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 159 bits (385), Expect = 1e-37
Identities = 79/142 (55%), Positives = 98/142 (69%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P F F FFGHPEVYILI+PGFGI+SHI+S KK F GF+V
Sbjct: 229 PIFYQHAFWFFGHPEVYILIIPGFGIVSHIVSTY-SKKPVFGEISMVYAMASIGLLGFLV 287
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
+HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF LATI+G I ++ + F+FL
Sbjct: 288 WSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFL 347
Query: 451 FTVGGLTGVILANSSIDITLHD 386
FTVGGLTGV+LAN+S+D+ HD
Sbjct: 348 FTVGGLTGVVLANASLDVAFHD 369
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 158 bits (384), Expect = 1e-37
Identities = 84/215 (39%), Positives = 123/215 (57%), Gaps = 3/215 (1%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FFGHPEVYI+ LP G++S I+ + F + HH+F
Sbjct: 260 LFWFFGHPEVYIIFLPAAGLVSMIVPT-MARHPLVGYRLIVVALIGTGFFSFGLWVHHMF 318
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVFLFTV 443
T GI + +F++A++ +A+P+GI++F +ATI ++ + P++ LGF+F+FTV
Sbjct: 319 TTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLFIFTV 377
Query: 442 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYIL 263
GG+TGV++A ID +HDTY+VVAHFHYVL P F+ L+ +
Sbjct: 378 GGVTGVMVALVPIDFQVHDTYFVVAHFHYVLIGGMVFPLFATFYYWIPAFSRNMLSERLG 437
Query: 262 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
+ F+ +FIG N+TFFP H GL G+PRR YPD
Sbjct: 438 RWVFWLMFIGFNVTFFPMHMAGLLGMPRRVRTYPD 472
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 157 bits (381), Expect = 3e-37
Identities = 89/214 (41%), Positives = 116/214 (54%)
Frame = -1
Query: 805 FISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*A 626
F LF FGHPEVYILILP GIIS +I +K F GF V +
Sbjct: 250 FYQHLFWTFGHPEVYILILPAMGIISEVIPVH-ARKMLFGYSVMVFSTALIGFMGFTVWS 308
Query: 625 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 446
HH+FTVG+ + F+ T+ IAVPTG+KIF L+T+ G QI + +L +GF+ FT
Sbjct: 309 HHMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFT 368
Query: 445 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 266
+GGL+G + A + D HDTY+VVAHFHYVL + +P G L+ +
Sbjct: 369 IGGLSGFMHAAAPSDAQQHDTYFVVAHFHYVLIGGSIFAILSGIHHWFPKVFGRMLDERL 428
Query: 265 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
+ F IF G + FP H LGL G+PRR Y
Sbjct: 429 GRWSFALIFTGFHTFAFPFHILGLLGMPRRIYTY 462
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 157 bits (381), Expect = 3e-37
Identities = 77/148 (52%), Positives = 101/148 (68%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P +F FFGHPEVYILI+P FG++S I+ Q KK F GF V
Sbjct: 246 PLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCV 304
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
+HH+FTVG+D D+RAYF+ A++IIA+PTG KIF LATI+G + + +L +GF+ L
Sbjct: 305 WSHHMFTVGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVL 364
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVA 368
FT+GG+TGV++ANSS+DI HDTYYVVA
Sbjct: 365 FTIGGVTGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 157 bits (380), Expect = 4e-37
Identities = 81/216 (37%), Positives = 117/216 (54%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P F LF FFGHPEVY+L+LP GI+S I+ + G+K F F V
Sbjct: 282 PIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGRK-LFGFKFVVYSTLAIGVLSFGV 340
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
AHH+FT GID R+ F + ++ I++P+ +K+F + T+ ++ +L +GFV
Sbjct: 341 WAHHMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPMLFCIGFVQN 400
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
F +GG+TGV LA ID+ LHDTYYVV HFH+++ +P+ TG
Sbjct: 401 FIIGGVTGVFLAVIPIDLILHDTYYVVGHFHFIVYGAIGFALFAASYYWFPMVTGRMYQK 460
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
+ F+T +G N TF +LG G+PRRY+ Y
Sbjct: 461 RLAHAHFWTALVGSNATFLAMLWLGYGGMPRRYATY 496
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 155 bits (377), Expect = 1e-36
Identities = 81/209 (38%), Positives = 117/209 (55%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF F+ HP VYI++LP G++S ++S +K F GFIV HH+F
Sbjct: 286 LFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASLGFIVWGHHMF 344
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
T G++ F +T++IA+P+ IK F ATI G ++ +N L + F+ +F VGGL
Sbjct: 345 TSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIAFLSMFIVGGL 404
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
+G+ +A +D+ HDTY++VAHFHY+L +P G +N + K
Sbjct: 405 SGIFMAAVPVDVYFHDTYFIVAHFHYILFGATLFGVFAGIQFWFPKMFGRMMNEKLGKTH 464
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSD 167
F FIG N TFFP HFLG+ G+PRRY+D
Sbjct: 465 FVLTFIGANGTFFPMHFLGMQGMPRRYAD 493
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 155 bits (375), Expect = 2e-36
Identities = 81/210 (38%), Positives = 117/210 (55%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FFGHPEVYI+ LP G++S I++ ++ F F + HH+F
Sbjct: 250 LFWFFGHPEVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMALIATGVLAFGLWVHHMF 308
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
G+ ++FT++++ IAVP G++IF LATI + + L +GF+ +F +GGL
Sbjct: 309 VAGLPRLGESFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVIGGL 368
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
TGV++A+ D +HDTY+VVAHFHYVL +P TG ++ + +
Sbjct: 369 TGVMVASVPFDTQVHDTYFVVAHFHYVLVGGAVFPLLGAIYYWFPKLTGRMMSETLGRWS 428
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
F IF G N+TFFP H LGL G+PRR Y
Sbjct: 429 FGLIFSGFNLTFFPMHILGLQGMPRRIYTY 458
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 155 bits (375), Expect = 2e-36
Identities = 77/138 (55%), Positives = 91/138 (65%)
Frame = -1
Query: 604 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 425
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 424 ILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQFFT 245
+LANSS+DI LHDTYYVVAHFHYVLS P + ++K F
Sbjct: 61 VLANSSLDIVLHDTYYVVAHFHYVLSMGACICYYVSIYPLMPFINWVINKPLMIKNSIFN 120
Query: 244 IFIGVNITFFPQHFLGLA 191
FP FL ++
Sbjct: 121 NIFSCKFNIFPPTFLSIS 138
Score = 51.2 bits (117), Expect = 3e-05
Identities = 30/64 (46%), Positives = 36/64 (56%)
Frame = -3
Query: 332 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLI 153
C Y IY L+ FI K L KNSIF NI+ K+NIF TF S + ST+ LS LI
Sbjct: 92 CYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCKFNIFPPTFLSISRDASTMLWLSWLI 151
Query: 152 YFMK 141
+K
Sbjct: 152 LLLK 155
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 152 bits (369), Expect = 1e-35
Identities = 79/209 (37%), Positives = 115/209 (55%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF F+ HP VYI+ILP G++S I++ +K F GFIV HH+F
Sbjct: 283 LFWFYSHPAVYIMILPAMGMVSDILACF-SRKPIFGYKPMVYSICGIAGLGFIVWGHHMF 341
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
G++ F AT++IA+P+ +K F L T++G ++ + +L L FV +F +GGL
Sbjct: 342 VSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFVIGGL 401
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
+G+ +A + +DI +HDTY++VAHFHYVL +P G +N KI
Sbjct: 402 SGIFMAATPVDIVIHDTYFIVAHFHYVLFAGTAMAVFGSIYFWFPKMFGRMMNETAGKIH 461
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSD 167
F FI +N TFF H LG+ G PRR +D
Sbjct: 462 FALTFIFLNGTFFTMHILGVGGFPRRLAD 490
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 151 bits (367), Expect = 2e-35
Identities = 83/219 (37%), Positives = 117/219 (53%), Gaps = 1/219 (0%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVY++ILP FG+ S I++ K+ F G+ V
Sbjct: 238 PVLYQHLFWFFGHPEVYVIILPVFGLTSLILTSII-HKDIFGREGMMYCIISIGVVGYFV 296
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVF 455
AHH+FTVG+DID+R+YF+ AT II++PT +K+F + T G N + F+
Sbjct: 297 WAHHMFTVGLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGFRGNNSSWSFFSFLI 356
Query: 454 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 275
F GG TG++L++ S+DI LHDTY+VV HFH VLS P+ S+
Sbjct: 357 CFCFGGFTGLLLSSGSLDIMLHDTYFVVGHFHTVLSLAATFGLLIAHYFFLPIIFSYSIF 416
Query: 274 SYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
F + +G + F+P H GL+G+ RR +Y D
Sbjct: 417 ESFSFYHTFLLLVGALLVFYPMHLAGLSGMARRVPEYAD 455
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 150 bits (364), Expect = 4e-35
Identities = 82/217 (37%), Positives = 115/217 (52%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P +F F+ HP VY+ +LP FG S II ++ F F +
Sbjct: 184 PLIYQNIFWFYSHPVVYVQVLPVFGFYSEIIPVF-ARRPLFGYTSMVFAVWAITAVSFFL 242
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
HH+F G+ TR F+ T++IAVPTGIKIF + T++ I++ +L LG VF+
Sbjct: 243 WIHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVFM 302
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
F +GGLTG+ L +ID+ + D+ +VV HFHYVL I+ +PL TG
Sbjct: 303 FLIGGLTGLPLGMVAIDLGVSDSLFVVGHFHYVLGMAITLGILGAVIHWFPLATGKYYPE 362
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 161
+ K+ F+ IF G NI +F Q G+ G PRRY DYP
Sbjct: 363 NLGKLSFWLIFAGANIFYFLQMVAGMLGNPRRYPDYP 399
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 150 bits (363), Expect = 5e-35
Identities = 75/203 (36%), Positives = 118/203 (58%)
Frame = -1
Query: 766 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIFTVGIDIDTR 587
VY++ILP FG++SH + + G + G+ V AHH+FTVG+D+DTR
Sbjct: 1 VYVIILPVFGLVSHSLHRG-GLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDVDTR 59
Query: 586 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 407
YF+SAT++IA+PT IK+F + + + + + F+ +F +GG+TG++LANS
Sbjct: 60 VYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFLLGGVTGLVLANSE 118
Query: 406 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQFFTIFIGVN 227
+D+ +HD+YYVVAHFHYVLS ++ + L +G +++L++Q + G
Sbjct: 119 VDLVMHDSYYVVAHFHYVLSLGAVFGLLNGVLSCHELCSGYRSAAWLLRVQVVLLVWGTT 178
Query: 226 ITFFPQHFLGLAGIPRRYSDYPD 158
F+ H G G+PRR D PD
Sbjct: 179 CIFWGMHLSGTLGLPRRVPDAPD 201
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 147 bits (356), Expect = 4e-34
Identities = 88/220 (40%), Positives = 125/220 (56%), Gaps = 2/220 (0%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVY++ILP FG+ S I Q G +V
Sbjct: 212 PLLYQHLFWFFGHPEVYVVILPVFGLFSSSI-QLSSLHRIPGELSLVLAMASIALIGSVV 270
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVF 455
AHH++T G+DIDTR+YFT+AT+IIAVPTGIKIF L++ + ++ N ++ F+
Sbjct: 271 WAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIV 330
Query: 454 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 275
F +GG +G+IL+N+S+D LHDTYYVVAHFH V++ Y L + LSL
Sbjct: 331 SFAIGGTSGIILSNASVDHYLHDTYYVVAHFHIVVALSLVYGILVGL---YYLSSYLSLP 387
Query: 274 SYILKIQFFTIFIGVNITFFP-QHFLGLAGIPRRYSDYPD 158
+ + ++F+ + + F QHF G + +PRRY + D
Sbjct: 388 FSLPLSGYASLFVFSSFSVFALQHFQGYSAMPRRYFMHSD 427
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 147 bits (356), Expect = 4e-34
Identities = 79/212 (37%), Positives = 115/212 (54%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FFGHPEVY+L LP FGI+S II +K F V AHH+F
Sbjct: 259 LFWFFGHPEVYVLALPFFGIVSEIIPVF-SRKPMFGYVGLIFATLSIGALSMAVWAHHMF 317
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
G + +F+ T +I+VPTG+K F + T+ I + ++ +GF+ F GGL
Sbjct: 318 VTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATFLFGGL 375
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
TG++LA+ +D L D+Y+++AHFHY L +P TG ++ + KI
Sbjct: 376 TGIMLASPPLDFHLADSYFLIAHFHYTLFGTVVFASCAGVYFWFPKMTGRMMDERLGKIH 435
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
F+ F+G + TF QH++G G+PRRY+DY D
Sbjct: 436 FWLTFVGFHGTFLIQHWVGNMGMPRRYADYLD 467
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 145 bits (352), Expect = 1e-33
Identities = 77/212 (36%), Positives = 110/212 (51%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FFGHPEVYI ILP GI+SHI+ ++ ++V HH+F
Sbjct: 282 LFWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSMISIGFLSYVVWGHHMF 340
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
G++ + F+ T+II +P + L +++G+++ N L LGF+ +F GG+
Sbjct: 341 VSGMNPLSSLVFSFPTLIITIPATVLTLIWLGSLYGSRLRINSASLFALGFISMFVSGGV 400
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
+G LA SIDI LH TY+VV HFH V+ +P TG +N + KI
Sbjct: 401 SGFFLAQPSIDIYLHATYFVVGHFHLVMGVAAIFGVFAGTYFWFPKMTGHMMNETLGKIH 460
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
F+ FIG F P H+LG+ G RRYS + D
Sbjct: 461 FWGTFIGAYCIFMPFHYLGMVGNVRRYSSFVD 492
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 143 bits (347), Expect = 4e-33
Identities = 79/213 (37%), Positives = 115/213 (53%), Gaps = 2/213 (0%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF +GHPEVYIL+LP FGI S ++S GK+ F GF+V HH F
Sbjct: 279 LFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHKSMIYASGAISVLGFMVWLHHFF 337
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
T+G + A+F AT+II++PTG+K+F L TI+ ++ + IL LGF+ F++GG+
Sbjct: 338 TMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFSIGGM 397
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
TGV+LA D LH++ +++AHFH + +P G LN + K
Sbjct: 398 TGVLLAVPGADYVLHNSLFLIAHFHNTIIGGAVFGYLAGVSFWFPKVFGFKLNDKLGKAS 457
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRR--YSDYP 161
F+ IG F P + LG G+ RR ++D P
Sbjct: 458 FWFWQIGFMFAFMPLYVLGFLGMTRRLNHTDNP 490
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 142 bits (343), Expect = 1e-32
Identities = 75/216 (34%), Positives = 113/216 (52%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P F F+ HP VY+++LP GI++ + S +K F G +V
Sbjct: 238 PVLFQQFFWFYSHPTVYVMLLPYLGILAEVASTF-ARKPLFGYRQMVWAQMGIVVLGTMV 296
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
AHH+FTVG + F T +IAVPTG+K+F + T+ G ++ + LGF+F
Sbjct: 297 WAHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFN 356
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
F +GG+TGV+L+ + +D HD+Y+VVAHFH VL +P TG +
Sbjct: 357 FLLGGITGVMLSMTPLDYQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMTGRMYDE 416
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
+ ++ F+ +G +TF PQ+ LG G+PRRY Y
Sbjct: 417 RLGRLHFWLFLVGYLLTFLPQYALGYLGMPRRYYTY 452
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 141 bits (341), Expect = 2e-32
Identities = 75/211 (35%), Positives = 116/211 (54%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FGHPEVYI+ LP G+++ ++ GK F F + AHH+F
Sbjct: 276 LFWLFGHPEVYIIFLPAAGMVATMLPTFVGKP-LFGYGFAVAAVVTMSFLSFGLWAHHMF 334
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
G+ I + + F++A+ ++AVPTG++IF +AT+ + + LGF+F+F +GG+
Sbjct: 335 ATGLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFVLGGM 394
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
TGV++A ++ HD+Y+VVAH HYVL P FTG ++ + K
Sbjct: 395 TGVMVAAVPFNLQAHDSYFVVAHLHYVLIGGMVFPMFGALYYWVPHFTGRMMSERLGKWV 454
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 161
F+ +F G N+ FF H G+ G+PRR + YP
Sbjct: 455 FWLMFSGFNLAFFMMHLTGMRGMPRRVATYP 485
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 141 bits (341), Expect = 2e-32
Identities = 79/219 (36%), Positives = 113/219 (51%), Gaps = 2/219 (0%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF +GHPEVYILILP FG+ S + S GK+ F GF V
Sbjct: 272 PMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKR-LFGHHSMIYASGAIAVLGFAV 330
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
HH FT+G +F AT++I++PTG+K+F L TI+ ++ + I+ LGF+
Sbjct: 331 WLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMIT 390
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
F++GG+TGV+LA D LH++ +V+AHFH V+ +P G +LN
Sbjct: 391 FSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAYWFPKAFGFTLNE 450
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRR--YSDYP 161
K F+ G + F P + LG G+ RR +SD P
Sbjct: 451 KWGKAAFWFWISGFYVAFMPLYALGFMGMTRRLNHSDNP 489
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 139 bits (336), Expect = 1e-31
Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 3/157 (1%)
Frame = -1
Query: 619 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFT 446
++T G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFT 59
Query: 445 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSL-NSY 269
GG TGVIL N +ID+ LHDTYYV+AHFH+VLS F G +L +
Sbjct: 60 FGGTTGVILGNGAIDVALHDTYYVIAHFHFVLSIGAIIALFTSVSFFQESFFGKTLRENT 119
Query: 268 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
I+ + F+GV +TF P HFLG +PRR DYPD
Sbjct: 120 IIVLWSILFFVGVVLTFLPMHFLGFNVMPRRIPDYPD 156
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 138 bits (335), Expect = 1e-31
Identities = 76/216 (35%), Positives = 107/216 (49%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P F F+ HP VY+L+LP FGI S + +K F IV
Sbjct: 254 PVLFQHFFWFYSHPAVYVLVLPVFGIFSELFPVY-ARKPLFGYRFVAIASFGITFLSLIV 312
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
AHH+F G R F T++IA+PTG+K+F L T+ + N +L +G +
Sbjct: 313 WAHHMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLIN 372
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
F G+TGV+LA IDI + +TY+VVAHFHYV+ + +P FTG
Sbjct: 373 FIFAGITGVMLATVPIDIHVGNTYFVVAHFHYVIFNTIVFGVFAGIYHWFPKFTGKMYYE 432
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
+ K+ F FIG + + P H+ GL G+PRR + Y
Sbjct: 433 GLGKVHFVLTFIGATLNWLPLHWAGLLGMPRRVASY 468
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 138 bits (334), Expect = 2e-31
Identities = 72/217 (33%), Positives = 111/217 (51%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P +F FFGHPEVYIL+LP G++S +I Q ++ + F V
Sbjct: 238 PRLFQHIFWFFGHPEVYILVLPAMGLVSEVI-QRMARRRAYGYTAIAISSVAIASISFAV 296
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
HH+FT D R AT+ +A+P+G+K+F +AT++G +I +L L F+
Sbjct: 297 WMHHMFTAVQDFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLF 356
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
F VGG+TGV ++D+ LHDTY+V+ HFHY+++ +P TG +
Sbjct: 357 FIVGGVTGVFFPVITLDLHLHDTYFVLGHFHYIVNAIAFGVFGALLYY-FPHLTGRWYDE 415
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 161
+ +I + I +G T+ G+ G PRRY+ P
Sbjct: 416 RLARISWALITVGGFATYTLMSAAGVLGSPRRYAAAP 452
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 137 bits (332), Expect = 3e-31
Identities = 78/227 (34%), Positives = 113/227 (49%)
Frame = -1
Query: 841 HHF*SCXRRRPNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 662
H F RP LF F HP VY+++LP GI+S + ++
Sbjct: 254 HFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVSDALPTFC-RRPLVAYEAVAVST 312
Query: 661 XXXXXXGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 482
GF V HH+F GI A+F +A+++I++P+ + +F +ATI + +
Sbjct: 313 VATMLIGFEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTP 372
Query: 481 IL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*Y 302
L GFV +F VGG++GV+ A +D L DTY+VVAH HYVL +
Sbjct: 373 FLYFAGFVLMFVVGGVSGVMTAAVPLDWQLTDTYFVVAHLHYVLLGINVFPVLGGVAYWF 432
Query: 301 PLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 161
P FTG +N K+ F+ + +G N+ FFP H GL G+PRR YP
Sbjct: 433 PKFTGRMMNERFGKLTFWVVLVGFNLGFFPMHISGLLGMPRRIYTYP 479
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 136 bits (330), Expect = 5e-31
Identities = 77/215 (35%), Positives = 114/215 (53%)
Frame = -1
Query: 808 NFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV* 629
NF++ +F FGHPEVYILILP FG+ S I S GK F F+V
Sbjct: 294 NFLN-MFWLFGHPEVYILILPAFGVYSEIFSTFSGKV-LFGYKSLVWATISIAFLSFLVW 351
Query: 628 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 449
HH FT+G A F A+++I +PTG+KI+ + T+ +I ++ ++ L F+FLF
Sbjct: 352 LHHFFTMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLF 411
Query: 448 TVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSY 269
+GG+TG++LAN +D +H+T ++VAHFH ++ +P G L+
Sbjct: 412 VIGGITGIMLANPILDYQVHNTVFLVAHFHNMVVPGVLFGMLAGYTFWFPKAFGFRLDER 471
Query: 268 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
+I + G FFP + LGL G+PRR Y
Sbjct: 472 WGRISAYCWIFGWMGAFFPLYILGLMGLPRRSVAY 506
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 135 bits (327), Expect = 1e-30
Identities = 77/217 (35%), Positives = 107/217 (49%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P F F+ HP VY+++LP GI + + S +K F IV
Sbjct: 246 PVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAST-MARKPLFGYRVMVYSMLAIVLVSCIV 304
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
HH+F VGI + F +T+I+AVPTG+KIF + T+ G +I +GF+F
Sbjct: 305 WLHHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFN 364
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
F +GG+TGV L D + +YYVVAHFH V+ +P TG L+
Sbjct: 365 FLIGGITGVSLGMIPFDYQVTMSYYVVAHFHNVMMFGTAFLAMAGLYYWWPKMTGRFLDE 424
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 161
+ F+ IG +TF PQ+ LGL G+PRRY YP
Sbjct: 425 KVGLAHFWLFMIGSWLTFLPQYILGLLGMPRRYYTYP 461
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 135 bits (327), Expect = 1e-30
Identities = 77/214 (35%), Positives = 113/214 (52%), Gaps = 4/214 (1%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FFGHPEVYI+ LP G++S I+ + F + HH+F
Sbjct: 319 LFWFFGHPEVYIIFLPAAGMVSMIVPT-MARTPLVGYRFVVLALVGTAFLSFGLWVHHMF 377
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI----L*RLGFVFLFT 446
T GI + ++F +A+ +A+P+G+++F +AT + I L LGF+F+F
Sbjct: 378 TTGIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFLFIFV 437
Query: 445 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 266
+GGLTGV++A D HD+Y++VAH HYVL P + +L+ +
Sbjct: 438 LGGLTGVMVAVIPFDWQAHDSYFIVAHLHYVLVGGMVFPLFAAFYYWMPYTSRQALSERL 497
Query: 265 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
+ F +F+G NITFFP HF GLAG+PRR Y
Sbjct: 498 GRWVFGLMFVGFNITFFPMHFTGLAGMPRRVYTY 531
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 134 bits (325), Expect = 2e-30
Identities = 84/220 (38%), Positives = 110/220 (50%), Gaps = 2/220 (0%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVYI+ILPGFGIIS ++S KE F
Sbjct: 234 PVLYQHLFWFFGHPEVYIMILPGFGIISLLLSTYT-TKEMFGNQTMILAMGFNSFVRLFG 292
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVF 455
+ YFT+ TI+IA+PTG KIF + T+ + I +L + F+
Sbjct: 293 LGTSYVHIRFGSRYSRYFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIV 352
Query: 454 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*Y-PLFTGLSL 278
F +GG TGV+L N+ ID+ LHDT YVV HFH+VLS I L G+ L
Sbjct: 353 NFVIGGTTGVVLGNAGIDLALHDTVYVVGHFHFVLSIGAIISMICFIIYIQRMLLFGIIL 412
Query: 277 NSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
++ + + I V +TF P HF G + +PRR DYPD
Sbjct: 413 SNRLSSLIAPIFMISVLLTFLPMHFTGFSPLPRRIPDYPD 452
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 132 bits (318), Expect = 1e-29
Identities = 69/218 (31%), Positives = 104/218 (47%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF F+ HP VYI++LP FG++S +++ +K F GF
Sbjct: 254 PVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVATY-SRKNIFGYRAVAYSSLGIAFVGFFA 312
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
HH+F G F T+I+ V T IK+F + T++ + + GF+F
Sbjct: 313 WGHHMFVSGQSTFAGGLFGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFF 372
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
GG+TG+ L S+D+ HDTY+VVAHFH+++ +P G + +
Sbjct: 373 TVFGGMTGIALGTVSLDVAWHDTYFVVAHFHFIMVGATIMAFLAALHYWFPKMFGRTYHE 432
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
+ I +G N TF PQ LG G+PRRY +YP+
Sbjct: 433 GWGLVAAALIILGFNATFIPQFLLGNNGMPRRYYEYPE 470
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 132 bits (318), Expect = 1e-29
Identities = 70/210 (33%), Positives = 107/210 (50%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF F+ HP VY++ LP ++ I++ + V HH++
Sbjct: 234 LFWFYSHPAVYVIFLPFMAMVFEIVATFARNRVFNYKMVVYGGIGGIVLLSGEVWIHHLY 293
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
G+ R T++I++P G+ + + T++G I++ +L LGF+FLF +GGL
Sbjct: 294 VTGMPDWLRVGQMVTTVLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFLIGGL 353
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
TGV LA S+ + L +TYYVV HFHYV++ +P TG N I K
Sbjct: 354 TGVPLALVSLTVHLSETYYVVGHFHYVMAVAGTFAIFGGVYYIFPKMTGKMYNETIGKWA 413
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
F+ F+GVNI F+ +G+ G+PRRY DY
Sbjct: 414 FWITFVGVNIVFWIMMDIGVEGMPRRYYDY 443
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 132 bits (318), Expect = 1e-29
Identities = 70/211 (33%), Positives = 110/211 (52%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FGHPEVYI+ LP + + I+ ++ F + HH+F
Sbjct: 276 LFWIFGHPEVYIIFLPLIALAAMIVPTA-ARQPIVGYSWIVLSAVGTGFLSFGLWVHHMF 334
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
T G+ + +F++A+ + +PTGI++F +AT+ ++ +L G + +FT GGL
Sbjct: 335 TTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFTAGGL 394
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
TGV++A + D +HDTY++VAH HY L YP+ T +L+ + +
Sbjct: 395 TGVMVAIAPFDWQVHDTYFIVAHLHYTLFGGMVFPIIAGVYYFYPVITKKALSERLGRWS 454
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 161
F+ +F G N+TF P H GL G+PRR YP
Sbjct: 455 FWLLFTGFNVTFLPMHLTGLKGMPRRVFTYP 485
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 128 bits (310), Expect = 1e-28
Identities = 72/210 (34%), Positives = 108/210 (51%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FFGHPEVYIL+ P G ++ +IS GK + F+V HH+F
Sbjct: 242 LFWFFGHPEVYILLFPALGAMADVISTFSGKP-IYAKRYILTAFLIATIISFVVWMHHMF 300
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
G +I TR +++ TI+I++P + + + T++ ++ Y +L +G + F +GG
Sbjct: 301 ITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFAVGALLNFIIGGS 360
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
TGV L + +ID TY+VVAHFHY+L +P TG + + + KI
Sbjct: 361 TGVYLGSIAIDRGFRGTYWVVAHFHYILVGTVTLGLIAGLYYWWPKITGRTYSERLGKIH 420
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
F +GV +TF PQ L +PRRY Y
Sbjct: 421 FALAMLGVALTFLPQ--FALMDMPRRYFTY 448
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 126 bits (305), Expect = 5e-28
Identities = 70/166 (42%), Positives = 93/166 (56%), Gaps = 9/166 (5%)
Frame = -1
Query: 628 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP-NIL*RLGFVFL 452
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ L
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILL 61
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN- 275
FT+GG TGV++ N+ +DI LHDTYY+VAHFH+VLS + G +LN
Sbjct: 62 FTLGGTTGVVMGNAGMDIALHDTYYIVAHFHFVLSLGAILATICGFVFYSKDMFGDTLNL 121
Query: 274 -------SYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
S L I F + + F P H LG +PRR DYPD
Sbjct: 122 FHVNTGSSPYLNIWFVVFLASIMLIFLPMHILGFNVMPRRIPDYPD 167
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 126 bits (305), Expect = 5e-28
Identities = 67/211 (31%), Positives = 110/211 (52%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FFGHPEVY+LI+P FG I+ I+ ++ G++V HH++
Sbjct: 395 LFWFFGHPEVYVLIIPTFGFINMIVPHNNTRRVA-SKHHMIWAIYVMAYMGYLVWGHHMY 453
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
VG+D +R +++ TI+I++P IK+ ++ + + L + F+ LF V G
Sbjct: 454 LVGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFLVAGF 513
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
TG+ L++ S+++++HDT+YVVAHFH +LS + G+ + +
Sbjct: 514 TGMWLSHVSLNVSMHDTFYVVAHFHIMLSGAAITGIFSGFYYYFNALFGIKFSRMFGYMH 573
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 161
G + F PQ +LG +G+PRR DYP
Sbjct: 574 LIYYSGGQWVAFVPQFYLGFSGMPRRIHDYP 604
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 126 bits (304), Expect = 7e-28
Identities = 76/209 (36%), Positives = 111/209 (53%), Gaps = 3/209 (1%)
Frame = -1
Query: 781 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIFTVGI 602
+GHPEVYILILP FGI S IIS K F F+V HH FT+G
Sbjct: 277 WGHPEVYILILPSFGIFSEIISYIC-VKSVFSYISLIYATISITVLSFLVWLHHFFTMGS 335
Query: 601 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 422
+ +F+ +T+IIA+PTG+KIF + TI + + + F+ +F++GG +GVI
Sbjct: 336 GYLSNIFFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIFSIGGFSGVI 395
Query: 421 LANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPL-FTGLSLNSYILKIQFFT 245
L+ ++D H++ +++AHFH V+ Y L + LN+ K F
Sbjct: 396 LSIPNLDFIFHNSMFLIAHFHSVIIGGVLFGYLSGISLWYNLIYNNCELNN---KFNFNI 452
Query: 244 IF--IGVNITFFPQHFLGLAGIPRRYSDY 164
+F IGV +TFFP +FLG G+ RR + Y
Sbjct: 453 LFWLIGVILTFFPFYFLGYCGMIRRINIY 481
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 126 bits (303), Expect = 9e-28
Identities = 68/218 (31%), Positives = 99/218 (45%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P F F+ HP VYI++LP +IS ++ +K F GF
Sbjct: 247 PVLFQHFFWFYSHPAVYIMVLPAMAVISEVVCAF-SRKNIFGYKAVAYSSLGIAFVGFFT 305
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL 452
HH+FT G F ++ + + T IK+F AT++ I + GF+F
Sbjct: 306 WGHHMFTSGQSAFNGGVFGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFF 365
Query: 451 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 272
GG+TG+ LA S+D+ HDTY++VAHFH+++ +P G L
Sbjct: 366 LVFGGMTGIALATVSLDVHWHDTYFIVAHFHFIMVGATVMAFLAALHYWFPKIAGKRLPE 425
Query: 271 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
+ I +G N TF PQ LG G+PRRY YP+
Sbjct: 426 GWGLVAAVMIILGFNFTFIPQFLLGNEGMPRRYFSYPE 463
Score = 33.5 bits (73), Expect = 7.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -2
Query: 837 IFDPAGGGDPILYQH 793
IFDPA GGDP+L+QH
Sbjct: 238 IFDPARGGDPVLFQH 252
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 123 bits (297), Expect = 5e-27
Identities = 70/212 (33%), Positives = 111/212 (52%)
Frame = -1
Query: 799 STLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHH 620
+ LF +GHPEVY ++LP FG IS II +K F + V HH
Sbjct: 295 TNLFWIWGHPEVYFVVLPAFGFISEIIPTF-AEKPLFGYATMVIATFAIGGISWGVWLHH 353
Query: 619 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVG 440
FT+G +F++AT+++ +PTG+K+F T+ ++ + P +L LG +FL VG
Sbjct: 354 FFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLLLVG 413
Query: 439 GLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILK 260
GLTG++LA +I+ T+H++ +VVAHFH ++ +P G L++ +
Sbjct: 414 GLTGMMLAIPAINYTVHNSVFVVAHFHCMMLLIAYAIFGAIIF-WFPKLFGFHLDAPSAR 472
Query: 259 IQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
F++ +G + F LGL G+ RR DY
Sbjct: 473 ANFWSFSVGTVLVFGAMFALGLMGMTRRL-DY 503
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 121 bits (291), Expect = 3e-26
Identities = 70/212 (33%), Positives = 103/212 (48%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FFGHPEVYI+ P G+++ G++ F+V HH+F
Sbjct: 256 LFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLVALQSFVVWMHHMF 314
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
GI++ + F + TI I++P + +F + T+ ++ + L LG + LF +GG+
Sbjct: 315 LTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFIIGGI 374
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
TGV L +D TY+VVAHFHYV+ YP TG N + KIQ
Sbjct: 375 TGVFLGAIVLDYQFRGTYWVVAHFHYVM-VAGATALFGGLYYWYPKITGKMYNETLGKIQ 433
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
F F+G N+ +FP F+ PRR YP+
Sbjct: 434 FGVYFLGFNLLYFPM-FIAWE-TPRRVFVYPE 463
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 120 bits (288), Expect = 6e-26
Identities = 65/211 (30%), Positives = 101/211 (47%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF F HPEVY+L++P G++ ++ + +K + GF AHH+F
Sbjct: 236 LFWFTFHPEVYVLVIPAIGMMYEMVPRF-SRKPIYSYNSGLFAFVLLTIVGFSSWAHHMF 294
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
G+ + F T+ + + +F +AT+ +I ++ ++ +G + LF G
Sbjct: 295 ATGMSFTEKTVFMLGTLAAVPASAMHVFNFVATMWNGRIRFDSPMMWSIGGIALFFSAGA 354
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
GV+ A +D T HDTY+VV HFH + +P TG N + KI
Sbjct: 355 GGVLNAAMPLDFTTHDTYWVVGHFHLFVMGTIAFGSIGFFYYMFPFVTGRMYNEKLGKIH 414
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 161
F F+G + FF QH LG+ G+PRR DYP
Sbjct: 415 FVFSFVGAVLLFFTQHILGIYGMPRRVYDYP 445
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 117 bits (281), Expect = 4e-25
Identities = 67/209 (32%), Positives = 103/209 (49%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FGHPEVYI+ILP +GI+ ++S K + + HH+F
Sbjct: 272 LFWIFGHPEVYIMILPAWGILGDVLSFFARKPHHWYRGTVWAMVLVTVLSAMVY-GHHMF 330
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
G+ F T++I++P+ + + + T+ + Y+ +L LG VF+F VGGL
Sbjct: 331 MTGMSPLLGEGFMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFGVGGL 390
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
TG+ L + S+D+ LHDT +VV HFH+ ++ +P G L + KI
Sbjct: 391 TGLFLGDISMDLYLHDTMFVVGHFHFTMAAASVMGAFTGIYFWFPKMFGRRLGERLGKIH 450
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSD 167
F+ F+G+ + F Q G AG RR D
Sbjct: 451 FWFTFLGLTLVFGGQLLAGYAGQERRLFD 479
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 117 bits (281), Expect = 4e-25
Identities = 66/212 (31%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFI-V*AHHI 617
LF FFGHPEVYILILP G++S ++ + ++E F + V HH+
Sbjct: 232 LFWFFGHPEVYILILPAMGLVSELLPK-MARREIFGYTAIALSSIAIAFLSALGVWMHHM 290
Query: 616 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 437
FT + + ++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F +GG
Sbjct: 291 FTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLLGG 350
Query: 436 LTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKI 257
+TGV ID L+ TY+VV HFHY++ +P ++G N + K
Sbjct: 351 ITGVFFPLVPIDYALNGTYFVVGHFHYMVYAILYALLGALFYY-FPFWSGKWYNDDLGKT 409
Query: 256 QFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 161
+ G +T G+ G+PRRY+ P
Sbjct: 410 GAILLVAGTFLTATGMSIAGILGMPRRYAVIP 441
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 114 bits (275), Expect = 2e-24
Identities = 70/210 (33%), Positives = 101/210 (48%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FGHPEVYI+ LP G IS I+ + F + HH+F
Sbjct: 250 LFWLFGHPEVYIIFLPAAGAISTILPV-MARTGLLGYGWIVAAAVALGVLSFGLWVHHMF 308
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
T GI A+F++A+ ++AVPT +++F + T+ + +L L F F +GGL
Sbjct: 309 TTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFVIGGL 368
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
TGV++A D +HDTY++VAH HYVL P FTG +
Sbjct: 369 TGVMVAIVPFDWQVHDTYFIVAHLHYVLIGGFVFPMLAALYYWLPHFTGRKTYFNLGPTA 428
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
F+ + IG + TF H+ GL G+ RR +
Sbjct: 429 FWLVVIGFHGTFLLLHWAGLLGMRRRIDSF 458
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 113 bits (272), Expect = 5e-24
Identities = 71/211 (33%), Positives = 103/211 (48%), Gaps = 1/211 (0%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF FGHPEVYI+ LP G IS I+ + E F + HH+F
Sbjct: 250 LFWLFGHPEVYIIFLPAAGAISTILPV-MARTELIGYRWVVAAAISLAVLSFGLWVHHMF 308
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RLGFVFLFTVGG 437
T GI A F++A+ ++AVPT +++F + T+ GT P ++ L F F +GG
Sbjct: 309 TTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATFVIGG 367
Query: 436 LTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKI 257
LTGV++A D +HDT+++VAH HYVL P TG + +
Sbjct: 368 LTGVMVAVVPFDWQVHDTHFIVAHLHYVLVGGFVFPMLAALYYWMPHVTGRKRFFRVGDV 427
Query: 256 QFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
F+ + +G + TF H++GL G RR Y
Sbjct: 428 AFWLVTVGFHATFLAVHWVGLLGQRRRTETY 458
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 110 bits (264), Expect = 5e-23
Identities = 58/110 (52%), Positives = 68/110 (61%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P LF FFGHPEVYILI+PGFGIISH++S KK F GF+V
Sbjct: 229 PILYEHLFWFFGHPEVYILIIPGFGIISHVVSTY-SKKPVFGEISMVYAMASIGLLGFLV 287
Query: 631 *AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 482
+HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 288 WSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 109 bits (262), Expect = 9e-23
Identities = 46/65 (70%), Positives = 50/65 (76%)
Frame = -3
Query: 806 FYINIILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 627
F ILIFWT SLYFNFT IWYNFSYYF K KK N W+F +NLCY SNW+I IYCLS
Sbjct: 23 FMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSDNLCYISNWIISIYCLS 82
Query: 626 SSYIH 612
SSYI+
Sbjct: 83 SSYIY 87
Score = 95.1 bits (226), Expect = 2e-18
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = -1
Query: 583 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 422
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+IL LGFVFLFTVGGLTGVI
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 102 bits (245), Expect = 1e-20
Identities = 66/210 (31%), Positives = 98/210 (46%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF +FGHPEVY+L+LPG G + +S + + +V HH F
Sbjct: 263 LFWYFGHPEVYLLLLPGTGAMFDYLSN-LNHRPPYLKKWMIAAMGAISVDSVMVFLHHTF 321
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL 434
GI + T I++PT + I +AT+ G + + IL L F +GG+
Sbjct: 322 MTGIVFAWLMADSIFTETISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFMIGGV 381
Query: 433 TGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQ 254
+GV ++ +ID +H YYVVAHFHY + +P FTG + + +I
Sbjct: 382 SGVTQSSLAIDTIVHGDYYVVAHFHYFMVGVAVMGLMGNLYYYFPKFTGRMYSEKLGRIH 441
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
+ + GVNI +FP F L +PRR Y
Sbjct: 442 WAFAYPGVNILYFPMFF--LYDLPRRVYTY 469
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 101 bits (242), Expect = 2e-20
Identities = 66/209 (31%), Positives = 93/209 (44%)
Frame = -1
Query: 790 F*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIFT 611
F F HPEVY+ ILP F I I+ K+ F G + HH FT
Sbjct: 328 FWFLFHPEVYVFILPAFAIWLEILPAA-AKRPLFARGWAIAGLVGVSMSGAMSGVHHYFT 386
Query: 610 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 431
D + T T +++PTG + TI G ++ N +L L + F +GGLT
Sbjct: 387 AVSDARMPIFMT-ITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFLIGGLT 445
Query: 430 GVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQF 251
G+ A+ D+ LH+TY+V+AHFH +P TG +N + K
Sbjct: 446 GIFNADVPADLQLHNTYWVIAHFHIRCFGGVIFTWIAALYWWFPKVTGRKINEFWGKFHA 505
Query: 250 FTIFIGVNITFFPQHFLGLAGIPRRYSDY 164
+ F+ N TFFP GL G+ RR + Y
Sbjct: 506 WWSFVFFNCTFFPMFIAGLDGMNRRIAIY 534
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 97.1 bits (231), Expect = 5e-19
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = -1
Query: 601 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 437
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGG 55
Score = 48.4 bits (110), Expect = 2e-04
Identities = 36/87 (41%), Positives = 43/87 (49%)
Frame = -2
Query: 261 KFNFLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI*FLH*VHIFLYYQ***Y*L 82
KFN Y LE I HF HNIF EYLDDIQI + E+ + +L + L
Sbjct: 115 KFNLQLYFLELILHFSHNIFLDLPEYLDDIQIFLMDLIVEMLYQDLDLYYLLLELSISYL 174
Query: 81 LFENQ*LTNELTYFL*ISHHQLNDIKI 1
LFE + + YFL H LND KI
Sbjct: 175 LFEKELSQIDQFYFLLNYRHLLNDTKI 201
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 91.9 bits (218), Expect = 2e-17
Identities = 97/278 (34%), Positives = 102/278 (36%)
Frame = -2
Query: 834 FDPAGGGDPILYQHXXXXXXXXXXXXXXYQDLV*FLILFHXXXXXXXXXXXXX*FMLY*Q 655
FDPAGGGDPILYQH QDLV F +LF FM
Sbjct: 217 FDPAGGGDPILYQHLFWFFGHPKLMFSFSQDLVSFHMLFPKKVEKSKLLVVSVSFMQSWL 276
Query: 654 LGY*DLLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKFLDD*LQYMELKLIITLIFY 475
L Y DLLFE LKFL D +MELKLI+ L FY
Sbjct: 277 LVYSDLLFELIMYLPSESMLKLELVLHQQLSLLLSQLGLKFLVDWQPFMELKLIMVLQFY 336
Query: 474 ED*VLYFYSQ*ED*QV*F*PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 295
ED L FY Q ED F
Sbjct: 337 EDWDLCFYLQSEDSLELFSLIHPLMLLYMMHIMLSHISIMFFPSGQYLLLSADLFIDTLY 396
Query: 294 XQAFH*ILIY*KFNFLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI*FLH*VHI 115
+ I Y KFNFL Y E I F NIF LEYLDDI IIQ EI F H
Sbjct: 397 LLDYLSIHSYSKFNFLLYSSELISLFSLNIFSGSLEYLDDILIIQILTSLEISFHHSDLT 456
Query: 114 FLYYQ***Y*LLFENQ*LTNELTYFL*ISHHQLNDIKI 1
F Y LLFENQ EL Y + LND KI
Sbjct: 457 FHCLPSYSYSLLFENQSFITELLYLPSMYLLLLNDTKI 494
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/93 (44%), Positives = 53/93 (56%)
Frame = -1
Query: 784 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIFTVG 605
FFGHPEVY+LILP FGI+SHI F G +V AHH+F VG
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 604 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 506
D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 61 YDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 79.0 bits (186), Expect = 1e-13
Identities = 50/115 (43%), Positives = 57/115 (49%)
Frame = -1
Query: 583 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 404
Y SA P G+K F + + G P I F GGLTGVILANSS
Sbjct: 223 YLXSAXXFXXGPPGVK-FLGDSYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSX 281
Query: 403 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQFFTIF 239
DI LHDTYYVVAH HYVLS + +PLFTGL+L I F I+
Sbjct: 282 DIILHDTYYVVAHXHYVLSMGAVFAILAGIVQWFPLFTGLTLTMNIKNTIFSYIY 336
Score = 54.0 bits (124), Expect = 5e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = -3
Query: 263 KNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 141
KN+IF IYWSK+NIFS+T S NT+T+F LS ++FMK
Sbjct: 328 KNTIFSYIYWSKFNIFSSTLCSISSNTTTLFWLSSCLHFMK 368
Score = 37.1 bits (82), Expect = 0.57
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2
Query: 834 FDPAGGGDPILYQH 793
FDPAGGGDPILYQH
Sbjct: 139 FDPAGGGDPILYQH 152
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 75.8 bits (178), Expect = 1e-12
Identities = 50/131 (38%), Positives = 62/131 (47%)
Frame = -3
Query: 533 F*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXYXXXXXXXXXX 354
F MT Y +W++N L P + FC FI+ N +FSQF Y
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQFLNWYYSTWYLLCCSSFPLR 83
Query: 353 XXXXXXICNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTI 174
ICNY IY L+ + F K KNSI+ NIY SK NIFS TFF +T +
Sbjct: 84 SFNSSSICNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFSPTFFSACRDTPPL 143
Query: 173 FRLSRLIYFMK 141
F SRLI +K
Sbjct: 144 FWFSRLILLLK 154
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 74.5 bits (175), Expect = 3e-12
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = -3
Query: 797 NIILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 627
++++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 70.1 bits (164), Expect = 7e-11
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Frame = -1
Query: 784 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIFTVG 605
FFGHP VY + P FG + + I K+ F ++ HH+ T
Sbjct: 2 FFGHPVVYYVPFPLFGALYYYIPIY-AKRSLFSEKWARWNIFLLAIGSMLIWVHHLQTFP 60
Query: 604 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL-----FTVG 440
+ +D RA+ T +T+++A +G+ + TI T Y+ LG FL F +G
Sbjct: 61 LPVDLRAWITVSTLVLASGSGLTVLNLGLTIL-TSKGYDYKD--PLGMTFLIALIGFIIG 117
Query: 439 GLTGVILANSSIDITLHDTYYVVAHFHYVL 350
G+ + L + I+ +H+TYYVV HFHY++
Sbjct: 118 GVQALPLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 69.3 bits (162), Expect = 1e-10
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = -1
Query: 262 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
KI F +F+GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLGLAGMPRRYSDYPD 434
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 68.1 bits (159), Expect = 3e-10
Identities = 46/124 (37%), Positives = 53/124 (42%)
Frame = -3
Query: 512 TWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXYXXXXXXXXXXXXXXXXI 333
TWNSN +M I CIFIH + F
Sbjct: 31 TWNSNLFFSITYMGISICIFIHLLEDLQELFLLILLLMLFYMTLIMLCSFSLCFIYSSCF 90
Query: 332 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLI 153
CNY GIY L+ I K L KNSIFYNI+ K IFSTTFF S +T T+ S LI
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSISSDTPTMLSFSSLI 150
Query: 152 YFMK 141
+K
Sbjct: 151 QLLK 154
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = -1
Query: 598 IDTRAYFTSATIIIAVPTGIKIFR*LAT 515
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 67.7 bits (158), Expect = 4e-10
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Frame = -1
Query: 490 NPNIL*RLGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXX 314
NP +L L F F+ GG G+I + +D T+H+T ++ HFH + +
Sbjct: 325 NPQML-ALAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFHLIFAGAIVTMYFAIA 383
Query: 313 IN*YPLFTGLSLNSY-ILKIQFFTIFIGVNITFFPQHFLGLAGIPRR--YSDYPD 158
+ +P TG +L +++ Q + FIG+ +T FP H++G+ G+PRR Y DY D
Sbjct: 384 YDLWPHLTGRALTHVRLMRWQLWLWFIGMIVTTFPWHWVGILGMPRRMAYYDYGD 438
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 64.1 bits (149), Expect = 4e-09
Identities = 34/75 (45%), Positives = 42/75 (56%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P +F FFGHPEVYILI+P FG++S I+ Q KK F GF V
Sbjct: 246 PLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCV 304
Query: 631 *AHHIFTVGIDIDTR 587
+HH+FTVG+D D R
Sbjct: 305 WSHHMFTVGLDADKR 319
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = -1
Query: 637 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL-*RLGF 461
+V HH+F VG D+ T +F+S T+II VPTGIK+F L + ++ N I+ +GF
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGF 85
Query: 460 VFLFTVGGLTG 428
+FLFT+GG G
Sbjct: 86 IFLFTMGGRQG 96
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 60.9 bits (141), Expect = 4e-08
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
LF F+GHP VY + P FG + + I Q G+ + V HH+
Sbjct: 229 LFWFYGHPVVYYVPFPLFGALYYYIPQYAGRS-LYSEKWARWNIYLLAIGTMGVWVHHLQ 287
Query: 613 TVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVFLFTV 443
T + I R + +T+I+A +G+ + TI T Y+ P + L + F +
Sbjct: 288 TWPLPIVLREWVNLSTLILATGSGLTVLNLGLTIF-TSRKYDWKDPVGMGALISLIGFIL 346
Query: 442 GGLTGVILANSSIDITLHDTYYVVAHFHYVL 350
G ++L +SI+ H++YYVV HFH ++
Sbjct: 347 AGAQALVLPENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 59.3 bits (137), Expect = 1e-07
Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 3/211 (1%)
Frame = -1
Query: 793 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIF 614
+F FFGHP VY L+ P + +++ + ++ +V HH++
Sbjct: 258 MFWFFGHPIVYQLLFPAVAAL-YLLFELGSNRDWLGYTVTGAIWVLATVTNLLVWVHHLY 316
Query: 613 TVGID-IDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 437
+ + +T+ I++ + + +F LA + + I P + L +F + G
Sbjct: 317 LYPFEPLPVNLMSQLSTMGISIVSAVSVFALLAMMWRSGIKMTPPYMFSLIAMFAWLEAG 376
Query: 436 LTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YP-LFTGLSLNSYILK 260
+GV A + ++ LH+T +VVAHFH + P + ++L K
Sbjct: 377 YSGVAQAIVAWNLYLHNTLWVVAHFHTMALLNIAMVAIALIYYLVPKAYPWVNLYDKWSK 436
Query: 259 IQFFTIFIGVNITFFPQHFL-GLAGIPRRYS 170
+ F+ +G F F G+ G+PRRY+
Sbjct: 437 VHFWMTLVG-GFGFVNTWFAEGVLGVPRRYA 466
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 56.8 bits (131), Expect = 7e-07
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = -1
Query: 625 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 476
HH+FTVG+D++T +F+S T+II VPTGIK+F L + +++N IL
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 56.4 bits (130), Expect = 9e-07
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = -1
Query: 490 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXI 311
NP +L + + + +GG G++ A+ +++ +H+T +V HFH + +
Sbjct: 327 NPMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFHLIFAGTVITMYLAVAY 386
Query: 310 N*YPLFTGLSLNSYILK-IQFFTIFIGVNITFFPQHFLGLAGIPRRYS 170
+P G L S L +Q + FIG+ I P H LGL G PRR S
Sbjct: 387 KLWPELCGRRLYSVDLALVQLWGWFIGMVIMTTPWHILGLLGQPRRIS 434
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 55.6 bits (128), Expect = 2e-06
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 17/229 (7%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P TLF F GHP VY +LP + + + Q+ G + F +
Sbjct: 227 PVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAGGR-LFSDPMARVSFILFLILSTPI 285
Query: 631 *AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQIN---------YN- 488
HH +T GI + T + P+ + F +A++ +G + +N
Sbjct: 286 GMHHQYTDPGISEIWKLVHAIFTFGVFFPSLLTFFNVVASLENGGRARGGKGWLVWVFNL 345
Query: 487 ----PNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 320
P+ ++ + LF GG G+I A+ +I++ +H+T ++ HFH +
Sbjct: 346 PWREPSFTTQVLAMILFAFGGAGGLINASYNINLVVHNTSWISGHFHLTVGTAVTLSFMG 405
Query: 319 XXIN*YPLFTGLSLNSYILK-IQFFTIFIGVNITFFPQHFLGLAGIPRR 176
P TG L S + +Q +T F+G+ I H LGL +PRR
Sbjct: 406 ITYWLVPHLTGRRLWSPTMALVQAWTWFVGMGIFSHWMHMLGLLSMPRR 454
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 3e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = -1
Query: 619 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 530
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 53.6 bits (123), Expect = 6e-06
Identities = 60/226 (26%), Positives = 88/226 (38%), Gaps = 19/226 (8%)
Frame = -1
Query: 796 TLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHH- 620
TLF +FGHP VY +LP + I+ + G F V HH
Sbjct: 226 TLFWYFGHPLVYFWLLPAYMAWYLIVPKLLGVN-VFSDSLARLAFILFLLFSIPVGFHHQ 284
Query: 619 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT--IHG------------TQINYNPN 482
GID + T T ++ +P+ + F A I G T++ +
Sbjct: 285 AVDPGIDHFWKFLQTVLTFMVIIPSLMTAFSMFAVFEISGREKKGKGLFGWFTKLPWRDV 344
Query: 481 IL*RLGFVFLFTV-GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN* 305
L LF + GG+ G+I A+ ++ +H+T +VV HFH +
Sbjct: 345 RFLSLFLAMLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFHITVGAPVAMTFYGLTFWL 404
Query: 304 YPLFTGLSLNSYILK---IQFFTIFIGVNITFFPQHFLGLAGIPRR 176
P TG + K IQ T +G+ + QH LGL G PRR
Sbjct: 405 VPYLTGRPFSRLAKKLALIQVITWSLGMFLMSTAQHVLGLLGAPRR 450
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 53.6 bits (123), Expect = 6e-06
Identities = 58/223 (26%), Positives = 89/223 (39%), Gaps = 18/223 (8%)
Frame = -1
Query: 790 F*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIFT 611
F FFGHP VY ++P I I+ + G E F V HH F
Sbjct: 214 FWFFGHPLVYFWLVPAVTIWYTILPRVLGT-EVFSKTAAKAAFMLYLIASVPVGLHHQFV 272
Query: 610 -VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG--------------TQINYNPN-I 479
G+ + T T ++AVP+ I F +AT+ T + + + +
Sbjct: 273 DPGVHPVYKYLHTVLTYLVAVPSFITAFNVIATLEKAGRMRGGKGLFGWITALPWGKDPV 332
Query: 478 L*RLGF-VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*Y 302
+ F + LF + G +GV+ A+ +++ +H+T +VV HFH +
Sbjct: 333 FTGITFAIILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFHLTVGGGVTLTFIATSFLLV 392
Query: 301 PLFTGLSLNSYILKIQFFTI-FIGVNITFFPQHFLGLAGIPRR 176
PL G + L I T+ F+G I H GL PRR
Sbjct: 393 PLLFGRDYVAKKLLIAVPTLWFVGQLIFGIGYHVAGLLHAPRR 435
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 52.0 bits (119), Expect = 2e-05
Identities = 49/214 (22%), Positives = 82/214 (38%), Gaps = 4/214 (1%)
Frame = -1
Query: 790 F*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHIFT 611
F FGH VY+ +P G + +++ K + V HH++
Sbjct: 243 FWIFGHAIVYMAWVPAVGAL-YLLIPMLANKPLYSDRMGRISALLYLIFSNNVPIHHLYM 301
Query: 610 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 431
V + I + T + +P+ + F AT G + +N + G+T
Sbjct: 302 VNLPIALKLLQEVLTYSVVIPSMMTFFNLWATAKGADVKWNIITAWTVTSFAGAIAAGVT 361
Query: 430 GVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQF 251
G+ A S D +H+T +VV HFH ++ Y + T +S + K
Sbjct: 362 GISNATISFDAIVHNTDWVVGHFHAMILFSIVPAAWAVL---YIMITMMSGRIWFSKGMA 418
Query: 250 FTIFIG--VNITFFPQHF--LGLAGIPRRYSDYP 161
+ +IG + TF F +G G+ RR YP
Sbjct: 419 WLHYIGYMIGTTFLIVGFELIGFYGVVRRAEIYP 452
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 50.4 bits (115), Expect = 6e-05
Identities = 52/232 (22%), Positives = 94/232 (40%), Gaps = 17/232 (7%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV 632
P TLF FFGHP VY ++P + + ++ + G + F V
Sbjct: 224 PTLTRTLFWFFGHPVVYFWLMPAYLLWYTVLPKIAGGR-LFSDPLARVVFVLFLLLSTPV 282
Query: 631 *AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RL--- 467
HH + GI + + T+ + +P+ + F +A++ +G + +L L
Sbjct: 283 GIHHQYLDPGIAEGFKFISMTNTMFLLLPSLLTAFTVVASVEYGARQRGGTGLLGWLTDL 342
Query: 466 --------GFVF---LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 320
G + +F GG +G++ A +I+ +H+T +V HFH +
Sbjct: 343 PWRKPEFTGMMLAGLMFAAGGFSGMVNAGMNINYMIHNTIWVPGHFHLTVGTAVALTFMA 402
Query: 319 XXIN*YPLFTGLSLNSYILKI-QFFTIFIGVNITFFPQHFLGLAGIPRRYSD 167
+P T + S + + Q FIG+ + H G+ G PRR ++
Sbjct: 403 ATYWIWPQITNKPIYSRSIGLFQVVLWFIGMALMSNAMHAQGILGAPRRTAE 454
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 48.0 bits (109), Expect = 3e-04
Identities = 46/164 (28%), Positives = 68/164 (41%), Gaps = 18/164 (10%)
Frame = -1
Query: 796 TLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXGFIV*AHHI 617
TLF +FGHP VY +LP + + I + G F V HH
Sbjct: 213 TLFWWFGHPLVYFWLLPAVALWYYAIPRILGVP-LFSETMAKVAYILYMIASTPVGLHHQ 271
Query: 616 FT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVF----- 455
F GI + T T ++A P+ + F LAT+ L +G+VF
Sbjct: 272 FVDPGIGPFFKLVHTLVTFVVATPSMLTAFNILATLERAGRMRGGRGL--VGWVFKLPWG 329
Query: 454 ------------LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 359
LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 330 SLAFSGLMLPIILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 46.4 bits (105), Expect = 0.001
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = -1
Query: 454 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSL- 278
+F +G++ A +I+ +H+T++VV HFH + P TG L
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFHLTVGTAVALTFMAVSYWFLPQITGKKLW 409
Query: 277 NSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 167
+ Q F+G+ H GLAG+PRR ++
Sbjct: 410 GKSVALAQVVLWFVGMTFMSNAMHRSGLAGMPRRTAE 446
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 45.6 bits (103), Expect = 0.002
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = -3
Query: 791 ILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSYIH 612
ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S ++H
Sbjct: 3 ILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPHVH 62
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 44.4 bits (100), Expect = 0.004
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = -1
Query: 427 VILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILK--IQ 254
+ L+ D T HDTYYVVAH HY+ Y L S+ + +
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYL---GLLALLVVAVGTAYVLLLRRSVPRIAVSGAVA 85
Query: 253 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 158
+ +G PQ L G+PRRY+DY D
Sbjct: 86 ICMLCLGTAFMVAPQAVLPGGGMPRRYTDYAD 117
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 42.7 bits (96), Expect = 0.011
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 25/176 (14%)
Frame = -1
Query: 811 PNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKK-ETFXXXXXXXXXXXXXXXGFI 635
P TLF FFGHP VY +LP + + I+ + +K + +
Sbjct: 210 PLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGKLYSDPAARLAFILFLIFSLP 269
Query: 634 V*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI------- 479
V HH FT GI + T +A+P+ I F ++ + +P +
Sbjct: 270 VGLHHQFTDPGITNTWKLIHALFTFGVALPSMITAFTVATSLEYSVKAEHPELKNSKFYW 329
Query: 478 -----L*RL-GFVFLFT----------VGGLTGVILANSSIDITLHDTYYVVAHFH 359
RL G ++F+ +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 330 WTFLPFMRLEGNKWMFSYFFAGLVLFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 42.7 bits (96), Expect = 0.011
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +3
Query: 504 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQT 635
VP + +H K LIPVGT +I+V E+K V S PTVN+ AQT
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 39.9 bits (89), Expect = 0.081
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = -1
Query: 469 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFT 290
L + +GG++GV + I+I +H+T YV HFH ++ P+
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFHATVAAGTTLAFMAITYFLVPVLF 410
Query: 289 GLSL-NSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 167
G L + K+Q + +G+ + G G+ RR+ D
Sbjct: 411 GRELILPGLAKLQPYLFGLGMGVFSLFMMGAGTLGVSRRHWD 452
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 39.5 bits (88), Expect = 0.11
Identities = 55/232 (23%), Positives = 91/232 (39%), Gaps = 17/232 (7%)
Frame = -1
Query: 820 RRRPNFISTLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXG 641
R P TLF F GH VY +LP + ++ ++ G K
Sbjct: 221 RTDPLLTRTLFWFTGHAIVYAWLLPAYVSWYALVPRQAGGK-IVSDSLTRLVFILFLLLS 279
Query: 640 FIV*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI------HGTQ--INY- 491
HH +T GI + T + P+ I F +A++ HG + + +
Sbjct: 280 IPTGFHHQYTDPGIHEGFKFVHAILTFGVFFPSLITAFSVMASLEMGGRAHGGRGLLGWI 339
Query: 490 ------NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXX 329
+P++ +L + F GG+TG+I A+ +++ +H+T +V HFH +
Sbjct: 340 PKLPWGDPSLSAQLLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFHMTVGSAVAMT 399
Query: 328 XXXXXIN*YPLFTGLSLNSYILKIQFFTIF-IGVNITFFPQHFLGLAGIPRR 176
P TG L + + I+ IG+ I GL G+PRR
Sbjct: 400 FMGVAYWMVPYLTGKKLWGRKVALASNWIYTIGLLIFARGMISAGLEGMPRR 451
>UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46;
Neoptera|Rep: Cytochrome c oxidase subunit I - Eueides
tales
Length = 95
Score = 37.5 bits (83), Expect = 0.43
Identities = 23/58 (39%), Positives = 25/58 (43%)
Frame = -1
Query: 175 YSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINQRINLFSLNLPSSIE*YQN 2
YSDYPD INQR+ LFSLN+PSSIE YQN
Sbjct: 1 YSDYPDNYMSWNIISSFGSYISLFSMILIIIIIWESMINQRMILFSLNMPSSIEWYQN 58
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 37.1 bits (82), Expect = 0.57
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2
Query: 834 FDPAGGGDPILYQH 793
FDPAGGGDPILYQH
Sbjct: 203 FDPAGGGDPILYQH 216
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 37.1 bits (82), Expect = 0.57
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2
Query: 834 FDPAGGGDPILYQH 793
FDPAGGGDPILYQH
Sbjct: 193 FDPAGGGDPILYQH 206
Score = 36.7 bits (81), Expect = 0.75
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1
Query: 61 NQRINLFSLNLPSSIE*YQN 2
NQRI LFSLN+PSSIE YQN
Sbjct: 451 NQRIILFSLNMPSSIEWYQN 470
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 37.1 bits (82), Expect = 0.57
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = -1
Query: 586 AYFTSATIIIAVPTGIKIFR*LATIHGTQINY-------NPNIL*RLGFVFLFT-VGGLT 431
A F S A+P G++ R + G + NP + + LF +GG+T
Sbjct: 316 AAFASMIHAFAIPAGLEAGRRQRGLGGGLFGWLTSGPWKNPVFSATIFSIILFGFMGGIT 375
Query: 430 GVILANSSIDITLHDTYYVVAHFH 359
GV++ +++T H+T+ V HFH
Sbjct: 376 GVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 35.9 bits (79), Expect = 1.3
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -2
Query: 834 FDPAGGGDPILYQH 793
+DPAGGGDPILYQH
Sbjct: 220 YDPAGGGDPILYQH 233
>UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvirus
'L'|Rep: AMV085 - Amsacta moorei entomopoxvirus (AmEPV)
Length = 204
Score = 34.7 bits (76), Expect = 3.0
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = -3
Query: 320 GIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIY 150
G+Y +I Y+ + LY K IF +I++ KYN++ + + +N + F +++ I+
Sbjct: 18 GLYDIIP--YKASLSILYNKKIIFNDIFFIKYNLYESRVDKKKFNNAISFLMNKNIF 72
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 3.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1
Query: 772 PEVYILILPGFGIISHIISQERGKK 698
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,474,138
Number of Sequences: 1657284
Number of extensions: 9323248
Number of successful extensions: 22158
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 21081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21977
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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