Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt15p06
         (817 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC106931-1|AAI06932.1|  447|Homo sapiens ameloblastin (enamel ma...    31   3.8  
BC041144-1|AAH41144.1|  511|Homo sapiens chromosome 2 open readi...    31   5.0  
AC127383-1|AAY24008.1|  207|Homo sapiens unknown protein.              31   5.0  

>BC106931-1|AAI06932.1|  447|Homo sapiens ameloblastin (enamel
           matrix protein) protein.
          Length = 447

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 28/94 (29%), Positives = 35/94 (37%), Gaps = 1/94 (1%)
 Frame = -3

Query: 647 VEIDSFVYKLTGGKNTITRKSGD-MNNLVPDRIMTRDMFTNLETIRENKLPTLMKNHKTG 471
           +E DS V    G +N      G  M    PD +      T LE      LP L K+   G
Sbjct: 304 LEFDSPVAATKGPENEEGGAQGSPMPEANPDNLENPAFLTELEPAPHAGLPALPKDDIPG 363

Query: 470 FPTRLLLPRGKAGGMKMLLYVIVSPLRMMENADL 369
            P     P GK  G+  +      PL   E AD+
Sbjct: 364 LPRS---PSGKMKGLPSVTPAAADPLMTPELADV 394


>BC041144-1|AAH41144.1|  511|Homo sapiens chromosome 2 open reading
           frame 13 protein.
          Length = 511

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 469 KPVLWFFINVGNLFSLMVSKFV 534
           KP LW ++N G+ FSL+V K++
Sbjct: 76  KPNLWCYLNPGDSFSLLVDKYI 97


>AC127383-1|AAY24008.1|  207|Homo sapiens unknown protein.
          Length = 207

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 469 KPVLWFFINVGNLFSLMVSKFV 534
           KP LW ++N G+ FSL+V K++
Sbjct: 76  KPNLWCYLNPGDSFSLLVDKYI 97


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,901,507
Number of Sequences: 237096
Number of extensions: 2591660
Number of successful extensions: 4645
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4639
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)