Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15o10
(895 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19437-1|AAB53943.1| 337|Homo sapiens transaldolase protein. 280 6e-75
BC018847-1|AAH18847.2| 336|Homo sapiens TALDO1 protein protein. 280 6e-75
BC010103-1|AAH10103.1| 337|Homo sapiens transaldolase 1 protein. 280 6e-75
AF058913-1|AAF40478.1| 337|Homo sapiens transaldolase protein. 280 6e-75
AF010400-1|AAC52068.1| 337|Homo sapiens transaldolase-related p... 280 6e-75
U62747-1|AAC51151.1| 36|Homo sapiens transaldolase protein. 38 0.065
AK024452-1|BAB15742.1| 1051|Homo sapiens FLJ00044 protein protein. 35 0.46
AK022283-1|BAB14001.1| 312|Homo sapiens protein ( Homo sapiens ... 35 0.46
AL592294-1|CAI21483.1| 1185|Homo sapiens zinc finger, SWIM-type ... 31 5.6
AL359473-7|CAI16443.1| 1185|Homo sapiens zinc finger, SWIM-type ... 31 5.6
AB040944-1|BAA96035.1| 1253|Homo sapiens KIAA1511 protein protein. 31 5.6
AK122706-1|BAC85504.1| 814|Homo sapiens ISOFORM. protein. 31 7.5
>L19437-1|AAB53943.1| 337|Homo sapiens transaldolase protein.
Length = 337
Score = 280 bits (686), Expect = 6e-75
Identities = 138/207 (66%), Positives = 156/207 (75%), Gaps = 1/207 (0%)
Frame = -3
Query: 806 INLFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEANVTL 627
I L+ E GI K+RILIKL+STWEGIQA KELE++HGIHCN+TLLFS QA+ACAEA VTL
Sbjct: 126 IELYKEAGISKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTL 185
Query: 626 ISPFVGRILDWYVEHT-KKTYEGKEDPGVVSVTKIYNYYKKFGYKTQVMGASFRNTGEIR 450
ISPFVGRILDW+V +T KK+YE EDPGV SVTKIYNYYKKF YKT VMGASFRNTGEI+
Sbjct: 186 ISPFVGRILDWHVANTDKKSYEPLEDPGVKSVTKIYNYYKKFSYKTIVMGASFRNTGEIK 245
Query: 449 ELAGCDLLTISPKLLQELASSXXXXXXXXXXXXXXLNDIEKISLTESEFRWHLNEDHMAT 270
LAGCD LTISPKLL EL +D+EKI L E FRW NED MA
Sbjct: 246 ALAGCDFLTISPKLLGELLQDNAKLVPVLSAKAAQASDLEKIHLDEKSFRWLHNEDQMAV 305
Query: 269 DKLSDGIRRFAADTRKLESLIKTLLAN 189
+KLSDGIR+FAAD KLE ++ + N
Sbjct: 306 EKLSDGIRKFAADAVKLERMLTERMFN 332
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -2
Query: 894 KIIPGRVSVEVDARLSFDKDASIAKA 817
K IPGRVS EVDARLSFDKDA +A+A
Sbjct: 97 KKIPGRVSTEVDARLSFDKDAMVARA 122
>BC018847-1|AAH18847.2| 336|Homo sapiens TALDO1 protein protein.
Length = 336
Score = 280 bits (686), Expect = 6e-75
Identities = 138/207 (66%), Positives = 156/207 (75%), Gaps = 1/207 (0%)
Frame = -3
Query: 806 INLFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEANVTL 627
I L+ E GI K+RILIKL+STWEGIQA KELE++HGIHCN+TLLFS QA+ACAEA VTL
Sbjct: 125 IELYKEAGISKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTL 184
Query: 626 ISPFVGRILDWYVEHT-KKTYEGKEDPGVVSVTKIYNYYKKFGYKTQVMGASFRNTGEIR 450
ISPFVGRILDW+V +T KK+YE EDPGV SVTKIYNYYKKF YKT VMGASFRNTGEI+
Sbjct: 185 ISPFVGRILDWHVANTDKKSYEPLEDPGVKSVTKIYNYYKKFSYKTIVMGASFRNTGEIK 244
Query: 449 ELAGCDLLTISPKLLQELASSXXXXXXXXXXXXXXLNDIEKISLTESEFRWHLNEDHMAT 270
LAGCD LTISPKLL EL +D+EKI L E FRW NED MA
Sbjct: 245 ALAGCDFLTISPKLLGELLQDNAKLVPVLSAKAAQASDLEKIHLDEKSFRWLHNEDQMAV 304
Query: 269 DKLSDGIRRFAADTRKLESLIKTLLAN 189
+KLSDGIR+FAAD KLE ++ + N
Sbjct: 305 EKLSDGIRKFAADAVKLERMLTERMFN 331
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -2
Query: 894 KIIPGRVSVEVDARLSFDKDASIAKA 817
K IPGRVS EVDARLSFDKDA +A+A
Sbjct: 96 KKIPGRVSTEVDARLSFDKDAMVARA 121
>BC010103-1|AAH10103.1| 337|Homo sapiens transaldolase 1 protein.
Length = 337
Score = 280 bits (686), Expect = 6e-75
Identities = 138/207 (66%), Positives = 156/207 (75%), Gaps = 1/207 (0%)
Frame = -3
Query: 806 INLFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEANVTL 627
I L+ E GI K+RILIKL+STWEGIQA KELE++HGIHCN+TLLFS QA+ACAEA VTL
Sbjct: 126 IELYKEAGISKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTL 185
Query: 626 ISPFVGRILDWYVEHT-KKTYEGKEDPGVVSVTKIYNYYKKFGYKTQVMGASFRNTGEIR 450
ISPFVGRILDW+V +T KK+YE EDPGV SVTKIYNYYKKF YKT VMGASFRNTGEI+
Sbjct: 186 ISPFVGRILDWHVANTDKKSYEPLEDPGVKSVTKIYNYYKKFSYKTIVMGASFRNTGEIK 245
Query: 449 ELAGCDLLTISPKLLQELASSXXXXXXXXXXXXXXLNDIEKISLTESEFRWHLNEDHMAT 270
LAGCD LTISPKLL EL +D+EKI L E FRW NED MA
Sbjct: 246 ALAGCDFLTISPKLLGELLQDNAKLVPVLSAKAAQASDLEKIHLDEKSFRWLHNEDQMAV 305
Query: 269 DKLSDGIRRFAADTRKLESLIKTLLAN 189
+KLSDGIR+FAAD KLE ++ + N
Sbjct: 306 EKLSDGIRKFAADAVKLERMLTERMFN 332
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -2
Query: 894 KIIPGRVSVEVDARLSFDKDASIAKA 817
K IPGRVS EVDARLSFDKDA +A+A
Sbjct: 97 KKIPGRVSTEVDARLSFDKDAMVARA 122
>AF058913-1|AAF40478.1| 337|Homo sapiens transaldolase protein.
Length = 337
Score = 280 bits (686), Expect = 6e-75
Identities = 138/207 (66%), Positives = 156/207 (75%), Gaps = 1/207 (0%)
Frame = -3
Query: 806 INLFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEANVTL 627
I L+ E GI K+RILIKL+STWEGIQA KELE++HGIHCN+TLLFS QA+ACAEA VTL
Sbjct: 126 IELYKEAGISKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTL 185
Query: 626 ISPFVGRILDWYVEHT-KKTYEGKEDPGVVSVTKIYNYYKKFGYKTQVMGASFRNTGEIR 450
ISPFVGRILDW+V +T KK+YE EDPGV SVTKIYNYYKKF YKT VMGASFRNTGEI+
Sbjct: 186 ISPFVGRILDWHVANTDKKSYEPLEDPGVKSVTKIYNYYKKFSYKTIVMGASFRNTGEIK 245
Query: 449 ELAGCDLLTISPKLLQELASSXXXXXXXXXXXXXXLNDIEKISLTESEFRWHLNEDHMAT 270
LAGCD LTISPKLL EL +D+EKI L E FRW NED MA
Sbjct: 246 ALAGCDFLTISPKLLGELLQDNAKLVPVLSAKAAQASDLEKIHLDEKSFRWLHNEDQMAV 305
Query: 269 DKLSDGIRRFAADTRKLESLIKTLLAN 189
+KLSDGIR+FAAD KLE ++ + N
Sbjct: 306 EKLSDGIRKFAADAVKLERMLTERMFN 332
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -2
Query: 894 KIIPGRVSVEVDARLSFDKDASIAKA 817
K IPGRVS EVDARLSFDKDA +A+A
Sbjct: 97 KKIPGRVSTEVDARLSFDKDAMVARA 122
>AF010400-1|AAC52068.1| 337|Homo sapiens transaldolase-related
protein protein.
Length = 337
Score = 280 bits (686), Expect = 6e-75
Identities = 138/207 (66%), Positives = 156/207 (75%), Gaps = 1/207 (0%)
Frame = -3
Query: 806 INLFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEANVTL 627
I L+ E GI K+RILIKL+STWEGIQA KELE++HGIHCN+TLLFS QA+ACAEA VTL
Sbjct: 126 IELYKEAGISKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTL 185
Query: 626 ISPFVGRILDWYVEHT-KKTYEGKEDPGVVSVTKIYNYYKKFGYKTQVMGASFRNTGEIR 450
ISPFVGRILDW+V +T KK+YE EDPGV SVTKIYNYYKKF YKT VMGASFRNTGEI+
Sbjct: 186 ISPFVGRILDWHVANTDKKSYEPLEDPGVKSVTKIYNYYKKFSYKTIVMGASFRNTGEIK 245
Query: 449 ELAGCDLLTISPKLLQELASSXXXXXXXXXXXXXXLNDIEKISLTESEFRWHLNEDHMAT 270
LAGCD LTISPKLL EL +D+EKI L E FRW NED MA
Sbjct: 246 ALAGCDFLTISPKLLGELLQDNAKLVPVLSAKAAQASDLEKIHLDEKSFRWLHNEDQMAV 305
Query: 269 DKLSDGIRRFAADTRKLESLIKTLLAN 189
+KLSDGIR+FAAD KLE ++ + N
Sbjct: 306 EKLSDGIRKFAADAVKLERMLTERMFN 332
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -2
Query: 894 KIIPGRVSVEVDARLSFDKDASIAKA 817
K IPGRVS EVDARLSFDKDA +A+A
Sbjct: 97 KKIPGRVSTEVDARLSFDKDAMVARA 122
>U62747-1|AAC51151.1| 36|Homo sapiens transaldolase protein.
Length = 36
Score = 37.5 bits (83), Expect = 0.065
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = -3
Query: 278 MATDKLSDGIRRFAADTRKLESLIKTLLAN 189
MA +KLSDGIR+FAAD KLE ++ + N
Sbjct: 2 MAVEKLSDGIRKFAADAVKLERMLTERMFN 31
>AK024452-1|BAB15742.1| 1051|Homo sapiens FLJ00044 protein protein.
Length = 1051
Score = 34.7 bits (76), Expect = 0.46
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 389 C*LILAVI*D*LSANHSRLIHVFPRYYGKMHPLLGSCNQT 508
C L+ A + ++ +HSRL H+ PR+YG LG +T
Sbjct: 975 CQLLDAAVTAYITTSHSRLTHISPRHYGDFIEFLGKARET 1014
>AK022283-1|BAB14001.1| 312|Homo sapiens protein ( Homo sapiens
cDNA FLJ12221 fis, clone MAMMA1001091. ).
Length = 312
Score = 34.7 bits (76), Expect = 0.46
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 389 C*LILAVI*D*LSANHSRLIHVFPRYYGKMHPLLGSCNQT 508
C L+ A + ++ +HSRL H+ PR+YG LG +T
Sbjct: 236 CQLLDAAVTAYITTSHSRLTHISPRHYGDFIEFLGKARET 275
>AL592294-1|CAI21483.1| 1185|Homo sapiens zinc finger, SWIM-type
containing 5 protein.
Length = 1185
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 422 LSANHSRLIHVFPRYYGKMHPLLGSCNQT 508
++ HSRL H+ PR+YG+ L +T
Sbjct: 1120 INTTHSRLTHISPRHYGEFIEFLSKARET 1148
>AL359473-7|CAI16443.1| 1185|Homo sapiens zinc finger, SWIM-type
containing 5 protein.
Length = 1185
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 422 LSANHSRLIHVFPRYYGKMHPLLGSCNQT 508
++ HSRL H+ PR+YG+ L +T
Sbjct: 1120 INTTHSRLTHISPRHYGEFIEFLSKARET 1148
>AB040944-1|BAA96035.1| 1253|Homo sapiens KIAA1511 protein protein.
Length = 1253
Score = 31.1 bits (67), Expect = 5.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 422 LSANHSRLIHVFPRYYGKMHPLLGSCNQT 508
++ HSRL H+ PR+YG+ L +T
Sbjct: 1188 INTTHSRLTHISPRHYGEFIEFLSKARET 1216
>AK122706-1|BAC85504.1| 814|Homo sapiens ISOFORM. protein.
Length = 814
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 479 HPLLGSCNQTSCNSCKFLSRKLLRGLPCPHKS 574
HPL G+C C+ C F ++ G PH S
Sbjct: 586 HPLPGTCCPNDCSGCAFGGKEYPSGADFPHPS 617
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,059,905
Number of Sequences: 237096
Number of extensions: 2557448
Number of successful extensions: 15844
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15834
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -