Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15n22
(868 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 26 0.52
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 25 0.90
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 25 1.2
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 24 1.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 24 1.6
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 24 2.1
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 24 2.1
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 4.8
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 4.8
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 8.4
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 8.4
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 25.8 bits (54), Expect = 0.52
Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITG 470
P + Q RP PR +R ++ + N +P Y P PR P +R A P
Sbjct: 75 PIYIPQPRPPHPR------LRREAESEAEPGNNRPVYIPQPR-PPHPRLRREPEAEPGNN 127
Query: 469 QQGVAAAAASIRPPLVSQ-SSRPANYK--YTPNMRNPPAPQ 356
+ P L + + P N + Y P R PP P+
Sbjct: 128 RPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPR-PPHPR 167
Score = 23.0 bits (47), Expect = 3.6
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 518
P + Q RP PR +R + + N +P Y P PR P
Sbjct: 47 PIYIPQPRPPHPR------LRREAEPKAEPGNNRPIYIPQPRPP 84
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 25.0 bits (52), Expect = 0.90
Identities = 28/104 (26%), Positives = 38/104 (36%), Gaps = 6/104 (5%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIR-TSLGARPIT 473
P + Q RP PR +R + + N +P Y P PR P R L A P
Sbjct: 46 PVYIPQPRPPHPR------LRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAELEAEPGN 99
Query: 472 GQQGVAAAAASIRPPL---VSQSSRPANYK--YTPNMRNPPAPQ 356
+ + P L + P N + Y P R PP P+
Sbjct: 100 NRPVYISQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR-PPHPR 142
Score = 24.6 bits (51), Expect = 1.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 518
P ++Q RP PR +R + + N +P Y P PR P
Sbjct: 158 PVYISQPRPPHPR------LRREAEPEAEPGNNRPVYIPQPRPP 195
Score = 23.8 bits (49), Expect = 2.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 518
P + Q RP PR +R + + N +P Y P PR P
Sbjct: 186 PVYIPQPRPPHPR------LRREAEPEAEPGNNRPVYIPQPRPP 223
Score = 23.8 bits (49), Expect = 2.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 518
P + Q RP PR +R + + N +P Y P PR P
Sbjct: 214 PVYIPQPRPPHPR------LRREAEPEAEPGNNRPVYIPQPRPP 251
Score = 23.8 bits (49), Expect = 2.1
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWN--AQPPVRPSTQAASAYANMQPTYRPAPRAP 518
P + Q RP PR A+P +P N +P Y P PR P
Sbjct: 242 PVYIPQPRPPHPRLRREAKPEAKPG--------NNRPVYIPQPRPP 279
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 24.6 bits (51), Expect = 1.2
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = -1
Query: 415 SSRPANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQR 242
SS AN Y P++RN P H Q +Q+Q Q G+ P + R
Sbjct: 2 SSYFAN-SYIPDLRNGGVEHPHQHQQHYGAAVQVPQQTQSVQQQSQQAGDPCDPSLLR 58
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 24.2 bits (50), Expect = 1.6
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Frame = -1
Query: 607 NAQPPVRPSTQAASAY-----ANMQPTYRPAPRAP 518
N PP RP+ A N +P Y P PR P
Sbjct: 22 NLDPPTRPTRLRREAEPEAEPGNNRPVYIPQPRPP 56
Score = 23.8 bits (49), Expect = 2.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 518
P + Q RP PR +R + + N +P Y P PR P
Sbjct: 47 PVYIPQPRPPHPR------LRREAEPEAEPGNNRPVYIPQPRPP 84
Score = 23.8 bits (49), Expect = 2.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 518
P + Q RP PR +R + + N +P Y P PR P
Sbjct: 75 PVYIPQPRPPHPR------LRREAEPEAEPGNNRPVYIPQPRPP 112
Score = 23.8 bits (49), Expect = 2.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 518
P + Q RP PR +R + + N +P Y P PR P
Sbjct: 103 PVYIPQPRPPHPR------LRREAEPEAEPGNNRPVYIPQPRPP 140
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 503 YCRLGRSSRCWSVSGLHICICRCCLCARPYRGLC 604
YC +G+ S + +C+C C R +R +C
Sbjct: 86 YCGIGKECELSPNSTIAVCVC-MRKCPRRHRPVC 118
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -2
Query: 405 QPIINIHQTCATHQLH 358
Q + IH TC H LH
Sbjct: 320 QKHLKIHDTCGVHNLH 335
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 23.8 bits (49), Expect = 2.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 518
P + Q RP PR +R + + N +P Y P PR P
Sbjct: 18 PVYIPQPRPPHPR------LRREAEPEAEPGNNRPVYIPQPRPP 55
Score = 23.8 bits (49), Expect = 2.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 518
P + Q RP PR +R + + N +P Y P PR P
Sbjct: 46 PVYIPQPRPPHPR------LRREAEPEAEPGNNRPVYIPQPRPP 83
Score = 23.8 bits (49), Expect = 2.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 518
P + Q RP PR +R + + N +P Y P PR P
Sbjct: 74 PVYIPQPRPPHPR------LRREAEPEAEPGNNRPVYIPQPRPP 111
Score = 23.8 bits (49), Expect = 2.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 518
P + Q RP PR +R + + N +P Y P PR P
Sbjct: 102 PVYIPQPRPPHPR------LRREAEPEAEPGNNRPVYIPQPRPP 139
Score = 23.8 bits (49), Expect = 2.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 518
P + Q RP PR +R + + N +P Y P PR P
Sbjct: 158 PVYIPQPRPPHPR------LRREAEPEAEPGNNRPVYIPQPRPP 195
Score = 23.4 bits (48), Expect = 2.8
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 649 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 518
P + Q RP PR + +P + N +P Y P PR P
Sbjct: 130 PVYIPQPRPPHPRLRRE--AKPEAEPG----NNRPVYIPQPRPP 167
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = +1
Query: 349 LLVVELVGCACLVYIYN 399
LL++ LVG C+++I++
Sbjct: 67 LLIMSLVGNCCVIWIFS 83
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = +1
Query: 349 LLVVELVGCACLVYIYN 399
LL++ LVG C+++I++
Sbjct: 67 LLIMSLVGNCCVIWIFS 83
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 194 NFQKHTSYFPSQIRV 238
N Q+HT YF Q+ V
Sbjct: 239 NLQRHTGYFLIQVYV 253
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.8 bits (44), Expect = 8.4
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 106 DEPAVQQQLHLL*LSETLHVLTYEEVLNYQFPKAYQLF 219
DEP + + L+L + H LT ++ Y+ K ++ F
Sbjct: 244 DEPPLGKNLNLSLHASLNHTLTKDQPETYELVKEWRDF 281
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,556
Number of Sequences: 438
Number of extensions: 5610
Number of successful extensions: 30
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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