Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt15m06
         (864 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p pro...    31   1.5  
AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD2333...    31   1.5  
AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB...    31   1.5  
AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA...    31   1.5  
AE014298-1847|AAF48227.2|  320|Drosophila melanogaster CG12714-P...    29   8.3  

>BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p
           protein.
          Length = 1341

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = -3

Query: 808 ICPPYSSDVVPRILSSKRNVQKNKLKKVSFSHGIRIPFEKTKIRK 674
           +C     D++P + + + NVQ+  L++ S+     +PF+K K ++
Sbjct: 161 LCFIQGQDILPTLNNCRHNVQRGALERSSYPTADVVPFQKYKFKQ 205


>AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD23336
           protein.
          Length = 1239

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = -3

Query: 808 ICPPYSSDVVPRILSSKRNVQKNKLKKVSFSHGIRIPFEKTKIRK 674
           +C     D++P + + + NVQ+  L++ S+     +PF+K K ++
Sbjct: 59  LCFIQGQDILPTLNNCRHNVQRGALERSSYPTADVVPFQKYKFKQ 103


>AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB,
           isoform B protein.
          Length = 1296

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = -3

Query: 808 ICPPYSSDVVPRILSSKRNVQKNKLKKVSFSHGIRIPFEKTKIRK 674
           +C     D++P + + + NVQ+  L++ S+     +PF+K K ++
Sbjct: 116 LCFIQGQDILPTLNNCRHNVQRGALERSSYPTADVVPFQKYKFKQ 160


>AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA,
           isoform A protein.
          Length = 1341

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = -3

Query: 808 ICPPYSSDVVPRILSSKRNVQKNKLKKVSFSHGIRIPFEKTKIRK 674
           +C     D++P + + + NVQ+  L++ S+     +PF+K K ++
Sbjct: 161 LCFIQGQDILPTLNNCRHNVQRGALERSSYPTADVVPFQKYKFKQ 205


>AE014298-1847|AAF48227.2|  320|Drosophila melanogaster CG12714-PB
           protein.
          Length = 320

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -3

Query: 781 VPRILSSKRNVQKNKLKKVSFSHGIRIPFEKTKIRKHSLGASSG 650
           VP+I    RN +KNKLK+ +   G R    + ++R+    A+SG
Sbjct: 118 VPKIKQQNRNQKKNKLKQAA-EKGDRKEKNERRVREAKATATSG 160


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,880,903
Number of Sequences: 53049
Number of extensions: 614255
Number of successful extensions: 950
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)