Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt15m02
         (551 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X60656-1|CAA43063.1|  225|Homo sapiens elongation factor 1-beta ...    79   1e-14
X60489-1|CAA43019.1|  225|Homo sapiens elongation factor-1-beta ...    79   1e-14
CR456825-1|CAG33106.1|  225|Homo sapiens EEF1B2 protein.               79   1e-14
BT007079-1|AAP35742.1|  225|Homo sapiens eukaryotic translation ...    79   1e-14
BC067787-1|AAH67787.1|  225|Homo sapiens eukaryotic translation ...    79   1e-14
BC004931-1|AAH04931.1|  225|Homo sapiens eukaryotic translation ...    79   1e-14
BC000211-1|AAH00211.1|  225|Homo sapiens eukaryotic translation ...    79   1e-14
AC007383-2|AAY15062.1|  225|Homo sapiens unknown protein.              79   1e-14

>X60656-1|CAA43063.1|  225|Homo sapiens elongation factor 1-beta
           protein.
          Length = 225

 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = -2

Query: 412 MAVGXVKSAQGXNDLNQYLAEKSYVSGYTPXQADVQVFEQVGKAPAANLPHVLRWYNQIA 233
           M  G +KS  G   LN YLA+KSY+ GY P QADV VFE V   P A+L H LRWYN I 
Sbjct: 1   MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIK 60

Query: 232 SY 227
           SY
Sbjct: 61  SY 62


>X60489-1|CAA43019.1|  225|Homo sapiens elongation factor-1-beta
           protein.
          Length = 225

 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = -2

Query: 412 MAVGXVKSAQGXNDLNQYLAEKSYVSGYTPXQADVQVFEQVGKAPAANLPHVLRWYNQIA 233
           M  G +KS  G   LN YLA+KSY+ GY P QADV VFE V   P A+L H LRWYN I 
Sbjct: 1   MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIK 60

Query: 232 SY 227
           SY
Sbjct: 61  SY 62


>CR456825-1|CAG33106.1|  225|Homo sapiens EEF1B2 protein.
          Length = 225

 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = -2

Query: 412 MAVGXVKSAQGXNDLNQYLAEKSYVSGYTPXQADVQVFEQVGKAPAANLPHVLRWYNQIA 233
           M  G +KS  G   LN YLA+KSY+ GY P QADV VFE V   P A+L H LRWYN I 
Sbjct: 1   MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIK 60

Query: 232 SY 227
           SY
Sbjct: 61  SY 62


>BT007079-1|AAP35742.1|  225|Homo sapiens eukaryotic translation
           elongation factor 1 beta 2 protein.
          Length = 225

 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = -2

Query: 412 MAVGXVKSAQGXNDLNQYLAEKSYVSGYTPXQADVQVFEQVGKAPAANLPHVLRWYNQIA 233
           M  G +KS  G   LN YLA+KSY+ GY P QADV VFE V   P A+L H LRWYN I 
Sbjct: 1   MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIK 60

Query: 232 SY 227
           SY
Sbjct: 61  SY 62


>BC067787-1|AAH67787.1|  225|Homo sapiens eukaryotic translation
           elongation factor 1 beta 2 protein.
          Length = 225

 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = -2

Query: 412 MAVGXVKSAQGXNDLNQYLAEKSYVSGYTPXQADVQVFEQVGKAPAANLPHVLRWYNQIA 233
           M  G +KS  G   LN YLA+KSY+ GY P QADV VFE V   P A+L H LRWYN I 
Sbjct: 1   MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIK 60

Query: 232 SY 227
           SY
Sbjct: 61  SY 62


>BC004931-1|AAH04931.1|  225|Homo sapiens eukaryotic translation
           elongation factor 1 beta 2 protein.
          Length = 225

 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = -2

Query: 412 MAVGXVKSAQGXNDLNQYLAEKSYVSGYTPXQADVQVFEQVGKAPAANLPHVLRWYNQIA 233
           M  G +KS  G   LN YLA+KSY+ GY P QADV VFE V   P A+L H LRWYN I 
Sbjct: 1   MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIK 60

Query: 232 SY 227
           SY
Sbjct: 61  SY 62


>BC000211-1|AAH00211.1|  225|Homo sapiens eukaryotic translation
           elongation factor 1 beta 2 protein.
          Length = 225

 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = -2

Query: 412 MAVGXVKSAQGXNDLNQYLAEKSYVSGYTPXQADVQVFEQVGKAPAANLPHVLRWYNQIA 233
           M  G +KS  G   LN YLA+KSY+ GY P QADV VFE V   P A+L H LRWYN I 
Sbjct: 1   MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIK 60

Query: 232 SY 227
           SY
Sbjct: 61  SY 62


>AC007383-2|AAY15062.1|  225|Homo sapiens unknown protein.
          Length = 225

 Score = 79.0 bits (186), Expect = 1e-14
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = -2

Query: 412 MAVGXVKSAQGXNDLNQYLAEKSYVSGYTPXQADVQVFEQVGKAPAANLPHVLRWYNQIA 233
           M  G +KS  G   LN YLA+KSY+ GY P QADV VFE V   P A+L H LRWYN I 
Sbjct: 1   MGFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIK 60

Query: 232 SY 227
           SY
Sbjct: 61  SY 62


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,572,551
Number of Sequences: 237096
Number of extensions: 1106155
Number of successful extensions: 1703
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1703
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)