Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15l02
(706 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111517-1|AAI11518.1| 213|Homo sapiens NDUFS7 protein protein. 268 1e-71
BC005954-1|AAH05954.1| 213|Homo sapiens NADH dehydrogenase (ubi... 268 1e-71
BC001715-1|AAH01715.2| 208|Homo sapiens NDUFS7 protein protein. 268 2e-71
AK222738-1|BAD96458.1| 213|Homo sapiens NADH-ubiquinone oxidore... 268 2e-71
AF115969-1|AAP97240.1| 213|Homo sapiens NADH:ubiquinone oxidore... 268 2e-71
AC005329-1|AAC27669.1| 158|Homo sapiens NUKM_HUMAN, partial CDS... 268 2e-71
AK092169-1|BAC03820.1| 213|Homo sapiens protein ( Homo sapiens ... 215 1e-55
AF060512-1|AAG43130.1| 214|Homo sapiens My017 protein protein. 180 6e-45
AK128713-1|BAC87587.1| 155|Homo sapiens C 1.6.5.3). protein. 153 6e-37
AK127759-1|BAC87117.1| 294|Homo sapiens r (EC 1.6.5.3). protein. 30 9.3
>BC111517-1|AAI11518.1| 213|Homo sapiens NDUFS7 protein protein.
Length = 213
Score = 268 bits (657), Expect = 1e-71
Identities = 131/209 (62%), Positives = 156/209 (74%)
Frame = -3
Query: 644 MQAIKALGATSPNTVLSFMKKGVFTPVVSQIRDTHLPAPNPTEKRPYSPFQDASNMAEMA 465
++ + LG S + L+ +GV V + + PA + R +P S+ E
Sbjct: 9 LRGFRILGLRS-SVGLAVQARGVHQSVATDGPSSTQPAL--PKARAVAP--KPSSRGEYV 63
Query: 464 VARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVA 285
VA+LDDL+NW R+ SLWPMTFGLACCAVEMMH+AAPRYDMDR+GVVFRASPRQSDVMIVA
Sbjct: 64 VAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQSDVMIVA 123
Query: 284 GTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPVDIYVPGC 105
GTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN GCDRIVPVDIY+PGC
Sbjct: 124 GTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGC 183
Query: 104 PPTAEALLYGVLQLQKKIKRMKTIQVWYR 18
PPTAEALLYG+LQLQ+KIKR + +Q+WYR
Sbjct: 184 PPTAEALLYGILQLQRKIKRERRLQIWYR 212
>BC005954-1|AAH05954.1| 213|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q
reductas protein.
Length = 213
Score = 268 bits (657), Expect = 1e-71
Identities = 131/209 (62%), Positives = 156/209 (74%)
Frame = -3
Query: 644 MQAIKALGATSPNTVLSFMKKGVFTPVVSQIRDTHLPAPNPTEKRPYSPFQDASNMAEMA 465
++ + LG S + L+ +GV V + + PA + R +P S+ E
Sbjct: 9 LRGFRILGLRS-SVGLAVQARGVHQSVATDGPSSTQPAL--PKARAVAP--KPSSRGEYV 63
Query: 464 VARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVA 285
VA+LDDL+NW R+ SLWPMTFGLACCAVEMMH+AAPRYDMDR+GVVFRASPRQSDVMIVA
Sbjct: 64 VAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQSDVMIVA 123
Query: 284 GTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPVDIYVPGC 105
GTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN GCDRIVPVDIY+PGC
Sbjct: 124 GTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGC 183
Query: 104 PPTAEALLYGVLQLQKKIKRMKTIQVWYR 18
PPTAEALLYG+LQLQ+KIKR + +Q+WYR
Sbjct: 184 PPTAEALLYGILQLQRKIKRERRLQIWYR 212
>BC001715-1|AAH01715.2| 208|Homo sapiens NDUFS7 protein protein.
Length = 208
Score = 268 bits (656), Expect = 2e-71
Identities = 120/156 (76%), Positives = 135/156 (86%)
Frame = -3
Query: 485 SNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQ 306
S+ E VA+LDDL+NW R+ SLWPMTFGLACCAVEMMH+AAPRYDMDR+GVVFRASPRQ
Sbjct: 52 SSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQ 111
Query: 305 SDVMIVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPV 126
SDVMIVAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN GCDRIVPV
Sbjct: 112 SDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPV 171
Query: 125 DIYVPGCPPTAEALLYGVLQLQKKIKRMKTIQVWYR 18
DIY+PGCPPTAEALLYG+LQLQ+KIKR + +Q+WYR
Sbjct: 172 DIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYR 207
>AK222738-1|BAD96458.1| 213|Homo sapiens NADH-ubiquinone
oxidoreductase Fe-S protein 7 variant protein.
Length = 213
Score = 268 bits (656), Expect = 2e-71
Identities = 120/156 (76%), Positives = 135/156 (86%)
Frame = -3
Query: 485 SNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQ 306
S+ E VA+LDDL+NW R+ SLWPMTFGLACCAVEMMH+AAPRYDMDR+GVVFRASPRQ
Sbjct: 57 SSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQ 116
Query: 305 SDVMIVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPV 126
SDVMIVAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN GCDRIVPV
Sbjct: 117 SDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPV 176
Query: 125 DIYVPGCPPTAEALLYGVLQLQKKIKRMKTIQVWYR 18
DIY+PGCPPTAEALLYG+LQLQ+KIKR + +Q+WYR
Sbjct: 177 DIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYR 212
>AF115969-1|AAP97240.1| 213|Homo sapiens NADH:ubiquinone
oxidoreductase PSST subunit protein.
Length = 213
Score = 268 bits (656), Expect = 2e-71
Identities = 120/156 (76%), Positives = 135/156 (86%)
Frame = -3
Query: 485 SNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQ 306
S+ E VA+LDDL+NW R+ SLWPMTFGLACCAVEMMH+AAPRYDMDR+GVVFRASPRQ
Sbjct: 57 SSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQ 116
Query: 305 SDVMIVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPV 126
SDVMIVAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN GCDRIVPV
Sbjct: 117 SDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPV 176
Query: 125 DIYVPGCPPTAEALLYGVLQLQKKIKRMKTIQVWYR 18
DIY+PGCPPTAEALLYG+LQLQ+KIKR + +Q+WYR
Sbjct: 177 DIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYR 212
>AC005329-1|AAC27669.1| 158|Homo sapiens NUKM_HUMAN, partial CDS
protein.
Length = 158
Score = 268 bits (656), Expect = 2e-71
Identities = 120/156 (76%), Positives = 135/156 (86%)
Frame = -3
Query: 485 SNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQ 306
S+ E VA+LDDL+NW R+ SLWPMTFGLACCAVEMMH+AAPRYDMDR+GVVFRASPRQ
Sbjct: 2 SSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQ 61
Query: 305 SDVMIVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPV 126
SDVMIVAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN GCDRIVPV
Sbjct: 62 SDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPV 121
Query: 125 DIYVPGCPPTAEALLYGVLQLQKKIKRMKTIQVWYR 18
DIY+PGCPPTAEALLYG+LQLQ+KIKR + +Q+WYR
Sbjct: 122 DIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYR 157
>AK092169-1|BAC03820.1| 213|Homo sapiens protein ( Homo sapiens
cDNA FLJ34850 fis, clone NT2NE2011758, highly similar to
NADH-UBIQUINONE OXIDOREDUCTASE 20 KDA SUBUNIT PRECURSOR
(EC ).
Length = 213
Score = 215 bits (526), Expect = 1e-55
Identities = 101/136 (74%), Positives = 111/136 (81%), Gaps = 4/136 (2%)
Frame = -3
Query: 485 SNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQ 306
S+ E VA+LDDL+NW R+ SLWPMTFGLACCAVEMMH+AAPRYDMDR+GVVFRASPRQ
Sbjct: 64 SSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQ 123
Query: 305 SDVMIVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPV 126
SDVMIVAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN GCDRIVPV
Sbjct: 124 SDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPV 183
Query: 125 DIYVPG----CPPTAE 90
DIY+PG PPT E
Sbjct: 184 DIYIPGRAGTAPPTRE 199
>AF060512-1|AAG43130.1| 214|Homo sapiens My017 protein protein.
Length = 214
Score = 180 bits (437), Expect = 6e-45
Identities = 106/212 (50%), Positives = 130/212 (61%), Gaps = 3/212 (1%)
Frame = -3
Query: 644 MQAIKALGATSPNTVLSFMKKGVFTPVVSQIRDTHLPAPNPTEKRPYSPFQDASNMAEMA 465
++ + LG S + L+ +GV V + + PA + R +P S+ E
Sbjct: 9 LRGFRILGLRS-SVGLAVQARGVHQSVATDGPSSTQPAL--PKARAVAP--KPSSRGEYV 63
Query: 464 VARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVA 285
VA+LDDL+NW R+ SLWPMTFGLACCAVEMMH+AAPRYDMDR+GVVFRASPRQSDVMIVA
Sbjct: 64 VAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQSDVMIVA 123
Query: 284 GTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPVDI---YV 114
GTLTNKMAPALRK PD + G G + + P
Sbjct: 124 GTLTNKMAPALRK-SPPRPDAGAAL-RGLHGELRQRGRLLPLFLLGGEGLRPHRARGHLH 181
Query: 113 PGCPPTAEALLYGVLQLQKKIKRMKTIQVWYR 18
P P TAEALLYG+LQLQ+KIKR + +Q+WYR
Sbjct: 182 PRLPTTAEALLYGILQLQRKIKRERRLQIWYR 213
>AK128713-1|BAC87587.1| 155|Homo sapiens C 1.6.5.3). protein.
Length = 155
Score = 153 bits (371), Expect = 6e-37
Identities = 69/81 (85%), Positives = 75/81 (92%)
Frame = -3
Query: 485 SNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQ 306
S+ E VA+LDDL+NW R+ SLWPMTFGLACCAVEMMH+AAPRYDMDR+GVVFRASPRQ
Sbjct: 64 SSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQ 123
Query: 305 SDVMIVAGTLTNKMAPALRKV 243
SDVMIVAGTLTNKMAPALRKV
Sbjct: 124 SDVMIVAGTLTNKMAPALRKV 144
>AK127759-1|BAC87117.1| 294|Homo sapiens r (EC 1.6.5.3). protein.
Length = 294
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 485 SNMAEMAVARLDDLLNWGRKGS 420
S+ E VA+LDDL+NW R+ S
Sbjct: 57 SSRGEYVVAKLDDLVNWARRVS 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,443,808
Number of Sequences: 237096
Number of extensions: 2382931
Number of successful extensions: 4774
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4773
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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