Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15j08
(889 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457086-1|CAG33367.1| 683|Homo sapiens SV2B protein. 41 0.007
BC030011-1|AAH30011.1| 683|Homo sapiens SV2B protein protein. 41 0.007
AB018278-1|BAA34455.2| 707|Homo sapiens KIAA0735 protein protein. 41 0.007
BC100827-1|AAI00828.1| 727|Homo sapiens synaptic vesicle glycop... 36 0.20
BC100826-1|AAI00827.1| 727|Homo sapiens synaptic vesicle glycop... 36 0.20
BC100825-1|AAI00826.1| 727|Homo sapiens synaptic vesicle glycop... 36 0.20
BC100824-1|AAI00825.1| 727|Homo sapiens synaptic vesicle glycop... 36 0.20
AB028977-1|BAA83006.1| 480|Homo sapiens KIAA1054 protein protein. 36 0.20
AL050341-4|CAI20431.1| 183|Homo sapiens collagen type IX alpha ... 34 0.60
AB026898-2|BAA77625.1| 551|Homo sapiens organic-cation transpor... 34 0.60
AB010438-1|BAA76350.1| 551|Homo sapiens organic-cation transpor... 34 0.60
BC022387-1|AAH22387.1| 542|Homo sapiens solute carrier family 2... 31 5.6
AB042505-1|BAB47393.1| 542|Homo sapiens organic anion transport... 31 5.6
X98333-1|CAA66978.1| 555|Homo sapiens organic cation transporte... 30 9.8
BC101316-1|AAI01317.1| 547|Homo sapiens LOC387601 protein protein. 30 9.8
BC039899-1|AAH39899.1| 555|Homo sapiens solute carrier family 2... 30 9.8
AY437532-1|AAR84082.1| 547|Homo sapiens putative UST1-like orga... 30 9.8
AL162582-1|CAI20003.1| 555|Homo sapiens solute carrier family 2... 30 9.8
>CR457086-1|CAG33367.1| 683|Homo sapiens SV2B protein.
Length = 683
Score = 40.7 bits (91), Expect = 0.007
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = -2
Query: 888 ATGVAVSMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
AT + + G I+GN + A+ + P + A L GGGL+ L LP T Q L
Sbjct: 624 ATAFGILNGLCKFGAILGNTIFASFVGITKVVPILLAAASLVGGGLIALRLPETREQVL 682
>BC030011-1|AAH30011.1| 683|Homo sapiens SV2B protein protein.
Length = 683
Score = 40.7 bits (91), Expect = 0.007
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = -2
Query: 888 ATGVAVSMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
AT + + G I+GN + A+ + P + A L GGGL+ L LP T Q L
Sbjct: 624 ATAFGILNGLCKFGAILGNTIFASFVGITKVVPILLAAASLVGGGLIALRLPETREQVL 682
>AB018278-1|BAA34455.2| 707|Homo sapiens KIAA0735 protein protein.
Length = 707
Score = 40.7 bits (91), Expect = 0.007
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = -2
Query: 888 ATGVAVSMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
AT + + G I+GN + A+ + P + A L GGGL+ L LP T Q L
Sbjct: 648 ATAFGILNGLCKFGAILGNTIFASFVGITKVVPILLAAASLVGGGLIALRLPETREQVL 706
>BC100827-1|AAI00828.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 35.9 bits (79), Expect = 0.20
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -2
Query: 888 ATGVAVSMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
ATG + ++GN++ +L+ P + + +L GGL+ L LP+T Q L
Sbjct: 668 ATGFGFLNALCKAAAVLGNLIFGSLVSITKSIPILLASTVLVCGGLVGLCLPDTRTQVL 726
>BC100826-1|AAI00827.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 35.9 bits (79), Expect = 0.20
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -2
Query: 888 ATGVAVSMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
ATG + ++GN++ +L+ P + + +L GGL+ L LP+T Q L
Sbjct: 668 ATGFGFLNALCKAAAVLGNLIFGSLVSITKSIPILLASTVLVCGGLVGLCLPDTRTQVL 726
>BC100825-1|AAI00826.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 35.9 bits (79), Expect = 0.20
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -2
Query: 888 ATGVAVSMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
ATG + ++GN++ +L+ P + + +L GGL+ L LP+T Q L
Sbjct: 668 ATGFGFLNALCKAAAVLGNLIFGSLVSITKSIPILLASTVLVCGGLVGLCLPDTRTQVL 726
>BC100824-1|AAI00825.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 35.9 bits (79), Expect = 0.20
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -2
Query: 888 ATGVAVSMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
ATG + ++GN++ +L+ P + + +L GGL+ L LP+T Q L
Sbjct: 668 ATGFGFLNALCKAAAVLGNLIFGSLVSITKSIPILLASTVLVCGGLVGLCLPDTRTQVL 726
>AB028977-1|BAA83006.1| 480|Homo sapiens KIAA1054 protein protein.
Length = 480
Score = 35.9 bits (79), Expect = 0.20
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -2
Query: 888 ATGVAVSMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
ATG + ++GN++ +L+ P + + +L GGL+ L LP+T Q L
Sbjct: 421 ATGFGFLNALCKAAAVLGNLIFGSLVSITKSIPILLASTVLVCGGLVGLCLPDTRTQVL 479
>AL050341-4|CAI20431.1| 183|Homo sapiens collagen type IX alpha 2
protein.
Length = 183
Score = 34.3 bits (75), Expect = 0.60
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 889 SYGCGGFDGSSSTRWYNWQRRDRSP 815
S GCGG DGSS T W W R P
Sbjct: 133 SPGCGGHDGSSRTSWAPWVPRQAGP 157
>AB026898-2|BAA77625.1| 551|Homo sapiens organic-cation transporter
like 3 protein.
Length = 551
Score = 34.3 bits (75), Expect = 0.60
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -2
Query: 885 TGVAVSMVAARLGGIIGNVVIAALLDTYCPA-PTFIVAVLLAGGGLMCLFLPNTTRQALQ 709
TG+ + + +R+GGI+ +VI LL Y A P I L GL+C LP T Q L+
Sbjct: 451 TGMGLVGIFSRIGGILTPLVI--LLGEYHAALPMLIYGSLPIVAGLLCTLLPETHGQGLK 508
>AB010438-1|BAA76350.1| 551|Homo sapiens organic-cation transporter
like 3 protein.
Length = 551
Score = 34.3 bits (75), Expect = 0.60
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -2
Query: 885 TGVAVSMVAARLGGIIGNVVIAALLDTYCPA-PTFIVAVLLAGGGLMCLFLPNTTRQALQ 709
TG+ + + +R+GGI+ +VI LL Y A P I L GL+C LP T Q L+
Sbjct: 451 TGMGLVGIFSRIGGILTPLVI--LLGEYHAALPMLIYGSLPIVAGLLCTLLPETHGQGLK 508
>BC022387-1|AAH22387.1| 542|Homo sapiens solute carrier family 22
(organic anion transporter), member 8 protein.
Length = 542
Score = 31.1 bits (67), Expect = 5.6
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -2
Query: 885 TGVAVSMVAARLGGIIGNVV-IAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
TG+ VS + R+G ++ +V I + + P + + LL GG LFLP T Q L
Sbjct: 444 TGMGVSNLWTRVGSMVSPLVKITGEVQPFIPNIIYGITALL--GGSAALFLPETLNQPL 500
>AB042505-1|BAB47393.1| 542|Homo sapiens organic anion transporter
3 protein.
Length = 542
Score = 31.1 bits (67), Expect = 5.6
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -2
Query: 885 TGVAVSMVAARLGGIIGNVV-IAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
TG+ VS + R+G ++ +V I + + P + + LL GG LFLP T Q L
Sbjct: 444 TGMGVSNLWTRVGSMVSPLVKITGEVQPFIPNIIYGITALL--GGSAALFLPETLNQPL 500
>X98333-1|CAA66978.1| 555|Homo sapiens organic cation transporter
protein.
Length = 555
Score = 30.3 bits (65), Expect = 9.8
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -2
Query: 882 GVAVSMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVL-LAGGGLMCLFLPNTTRQAL 712
GV + +GGII ++ L + + P + VL L GGL+ L LP T +AL
Sbjct: 466 GVHICSSMCDIGGIITPFLVYRLTNIWLELPLMVFGVLGLVAGGLV-LLLPETKGKAL 522
>BC101316-1|AAI01317.1| 547|Homo sapiens LOC387601 protein protein.
Length = 547
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -2
Query: 888 ATGVAVSMVAARLGGIIGNVVIAALLDTYC-PAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
ATG+ + A +GG + ++V+ +L Y P P I V GL+ L LP T Q L
Sbjct: 468 ATGITGNF--ANIGGALASLVM--ILSIYSRPLPWIIYGVFAILSGLVVLLLPETRNQPL 523
>BC039899-1|AAH39899.1| 555|Homo sapiens solute carrier family 22
(organic cation transporter), member 2 protein.
Length = 555
Score = 30.3 bits (65), Expect = 9.8
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -2
Query: 882 GVAVSMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVL-LAGGGLMCLFLPNTTRQAL 712
GV + +GGII ++ L + + P + VL L GGL+ L LP T +AL
Sbjct: 466 GVHICSSMCDIGGIITPFLVYRLTNIWLELPLMVFGVLGLVAGGLV-LLLPETKGKAL 522
>AY437532-1|AAR84082.1| 547|Homo sapiens putative UST1-like organic
anion transporter protein.
Length = 547
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -2
Query: 888 ATGVAVSMVAARLGGIIGNVVIAALLDTYC-PAPTFIVAVLLAGGGLMCLFLPNTTRQAL 712
ATG+ + A +GG + ++V+ +L Y P P I V GL+ L LP T Q L
Sbjct: 468 ATGITGNF--ANIGGALASLVM--ILSIYSRPLPWIIYGVFAILSGLVVLLLPETRNQPL 523
>AL162582-1|CAI20003.1| 555|Homo sapiens solute carrier family 22
(organic cation transporter), member 2 protein.
Length = 555
Score = 30.3 bits (65), Expect = 9.8
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -2
Query: 882 GVAVSMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVL-LAGGGLMCLFLPNTTRQAL 712
GV + +GGII ++ L + + P + VL L GGL+ L LP T +AL
Sbjct: 466 GVHICSSMCDIGGIITPFLVYRLTNIWLELPLMVFGVLGLVAGGLV-LLLPETKGKAL 522
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,181,742
Number of Sequences: 237096
Number of extensions: 2469986
Number of successful extensions: 4923
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4922
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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