Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15h09
(793 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065560-1|AAH65560.1| 457|Homo sapiens NFS1 nitrogen fixation ... 279 6e-75
AL357374-4|CAI13603.1| 457|Homo sapiens NFS1 nitrogen fixation ... 279 6e-75
AL357374-1|CAI13601.1| 397|Homo sapiens NFS1 nitrogen fixation ... 279 6e-75
AL109827-4|CAI20116.1| 457|Homo sapiens NFS1 nitrogen fixation ... 279 6e-75
AL109827-1|CAB87612.2| 397|Homo sapiens NFS1 nitrogen fixation ... 279 6e-75
AK223239-1|BAD96959.1| 457|Homo sapiens NFS1 nitrogen fixation ... 279 6e-75
AJ010952-1|CAA09424.1| 318|Homo sapiens putative tRNA splicing ... 279 6e-75
AF097025-1|AAD09187.2| 457|Homo sapiens cysteine desulfurase pr... 277 4e-74
BC007891-1|AAH07891.1| 445|Homo sapiens selenocysteine lyase pr... 60 7e-09
BC000586-1|AAH00586.2| 427|Homo sapiens SCLY protein protein. 60 7e-09
AK001377-1|BAA91659.1| 252|Homo sapiens protein ( Homo sapiens ... 60 7e-09
AC016757-1|AAY24333.1| 150|Homo sapiens unknown protein. 55 3e-07
>BC065560-1|AAH65560.1| 457|Homo sapiens NFS1 nitrogen fixation 1
homolog (S. cerevisiae) protein.
Length = 457
Score = 279 bits (685), Expect = 6e-75
Identities = 131/174 (75%), Positives = 150/174 (86%)
Frame = -1
Query: 763 GVDRREXMRSGTVPTPLVVGLGAACELAGREMAYDHLWMEKLSKRFLEKINSKLTHVIRN 584
G + MRSGTVPTPLVVGLGAACE+A +EM YDH + KLS+R ++ I L V+ N
Sbjct: 284 GGGQERGMRSGTVPTPLVVGLGAACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMN 343
Query: 583 GDAEQTYPGCVNLSFAFVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 404
GD + YPGC+NLSFA+VEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH
Sbjct: 344 GDPKHHYPGCINLSFAYVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 403
Query: 403 SSIRFGLGRFTTIEEVDYTAEKTIRHVERLREMSPLWEMVQEGIDIKTIQWSQH 242
SSIRFG+GRFTT EEVDYT EK I+HV+RLREMSPLWEMVQ+GID+K+I+W+QH
Sbjct: 404 SSIRFGIGRFTTEEEVDYTVEKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH 457
>AL357374-4|CAI13603.1| 457|Homo sapiens NFS1 nitrogen fixation 1
(S. cerevisiae) protein.
Length = 457
Score = 279 bits (685), Expect = 6e-75
Identities = 131/174 (75%), Positives = 150/174 (86%)
Frame = -1
Query: 763 GVDRREXMRSGTVPTPLVVGLGAACELAGREMAYDHLWMEKLSKRFLEKINSKLTHVIRN 584
G + MRSGTVPTPLVVGLGAACE+A +EM YDH + KLS+R ++ I L V+ N
Sbjct: 284 GGGQERGMRSGTVPTPLVVGLGAACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMN 343
Query: 583 GDAEQTYPGCVNLSFAFVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 404
GD + YPGC+NLSFA+VEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH
Sbjct: 344 GDPKHHYPGCINLSFAYVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 403
Query: 403 SSIRFGLGRFTTIEEVDYTAEKTIRHVERLREMSPLWEMVQEGIDIKTIQWSQH 242
SSIRFG+GRFTT EEVDYT EK I+HV+RLREMSPLWEMVQ+GID+K+I+W+QH
Sbjct: 404 SSIRFGIGRFTTEEEVDYTVEKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH 457
>AL357374-1|CAI13601.1| 397|Homo sapiens NFS1 nitrogen fixation 1
(S. cerevisiae) protein.
Length = 397
Score = 279 bits (685), Expect = 6e-75
Identities = 131/174 (75%), Positives = 150/174 (86%)
Frame = -1
Query: 763 GVDRREXMRSGTVPTPLVVGLGAACELAGREMAYDHLWMEKLSKRFLEKINSKLTHVIRN 584
G + MRSGTVPTPLVVGLGAACE+A +EM YDH + KLS+R ++ I L V+ N
Sbjct: 224 GGGQERGMRSGTVPTPLVVGLGAACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMN 283
Query: 583 GDAEQTYPGCVNLSFAFVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 404
GD + YPGC+NLSFA+VEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH
Sbjct: 284 GDPKHHYPGCINLSFAYVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 343
Query: 403 SSIRFGLGRFTTIEEVDYTAEKTIRHVERLREMSPLWEMVQEGIDIKTIQWSQH 242
SSIRFG+GRFTT EEVDYT EK I+HV+RLREMSPLWEMVQ+GID+K+I+W+QH
Sbjct: 344 SSIRFGIGRFTTEEEVDYTVEKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH 397
>AL109827-4|CAI20116.1| 457|Homo sapiens NFS1 nitrogen fixation 1
(S. cerevisiae) protein.
Length = 457
Score = 279 bits (685), Expect = 6e-75
Identities = 131/174 (75%), Positives = 150/174 (86%)
Frame = -1
Query: 763 GVDRREXMRSGTVPTPLVVGLGAACELAGREMAYDHLWMEKLSKRFLEKINSKLTHVIRN 584
G + MRSGTVPTPLVVGLGAACE+A +EM YDH + KLS+R ++ I L V+ N
Sbjct: 284 GGGQERGMRSGTVPTPLVVGLGAACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMN 343
Query: 583 GDAEQTYPGCVNLSFAFVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 404
GD + YPGC+NLSFA+VEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH
Sbjct: 344 GDPKHHYPGCINLSFAYVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 403
Query: 403 SSIRFGLGRFTTIEEVDYTAEKTIRHVERLREMSPLWEMVQEGIDIKTIQWSQH 242
SSIRFG+GRFTT EEVDYT EK I+HV+RLREMSPLWEMVQ+GID+K+I+W+QH
Sbjct: 404 SSIRFGIGRFTTEEEVDYTVEKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH 457
>AL109827-1|CAB87612.2| 397|Homo sapiens NFS1 nitrogen fixation 1
(S. cerevisiae) protein.
Length = 397
Score = 279 bits (685), Expect = 6e-75
Identities = 131/174 (75%), Positives = 150/174 (86%)
Frame = -1
Query: 763 GVDRREXMRSGTVPTPLVVGLGAACELAGREMAYDHLWMEKLSKRFLEKINSKLTHVIRN 584
G + MRSGTVPTPLVVGLGAACE+A +EM YDH + KLS+R ++ I L V+ N
Sbjct: 224 GGGQERGMRSGTVPTPLVVGLGAACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMN 283
Query: 583 GDAEQTYPGCVNLSFAFVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 404
GD + YPGC+NLSFA+VEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH
Sbjct: 284 GDPKHHYPGCINLSFAYVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 343
Query: 403 SSIRFGLGRFTTIEEVDYTAEKTIRHVERLREMSPLWEMVQEGIDIKTIQWSQH 242
SSIRFG+GRFTT EEVDYT EK I+HV+RLREMSPLWEMVQ+GID+K+I+W+QH
Sbjct: 344 SSIRFGIGRFTTEEEVDYTVEKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH 397
>AK223239-1|BAD96959.1| 457|Homo sapiens NFS1 nitrogen fixation 1
isoform a precursor variant protein.
Length = 457
Score = 279 bits (685), Expect = 6e-75
Identities = 131/174 (75%), Positives = 150/174 (86%)
Frame = -1
Query: 763 GVDRREXMRSGTVPTPLVVGLGAACELAGREMAYDHLWMEKLSKRFLEKINSKLTHVIRN 584
G + MRSGTVPTPLVVGLGAACE+A +EM YDH + KLS+R ++ I L V+ N
Sbjct: 284 GGGQERGMRSGTVPTPLVVGLGAACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMN 343
Query: 583 GDAEQTYPGCVNLSFAFVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 404
GD + YPGC+NLSFA+VEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH
Sbjct: 344 GDPKHHYPGCINLSFAYVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 403
Query: 403 SSIRFGLGRFTTIEEVDYTAEKTIRHVERLREMSPLWEMVQEGIDIKTIQWSQH 242
SSIRFG+GRFTT EEVDYT EK I+HV+RLREMSPLWEMVQ+GID+K+I+W+QH
Sbjct: 404 SSIRFGIGRFTTEEEVDYTVEKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH 457
>AJ010952-1|CAA09424.1| 318|Homo sapiens putative tRNA splicing
protein protein.
Length = 318
Score = 279 bits (685), Expect = 6e-75
Identities = 131/174 (75%), Positives = 150/174 (86%)
Frame = -1
Query: 763 GVDRREXMRSGTVPTPLVVGLGAACELAGREMAYDHLWMEKLSKRFLEKINSKLTHVIRN 584
G + MRSGTVPTPLVVGLGAACE+A +EM YDH + KLS+R ++ I L V+ N
Sbjct: 145 GGGQERGMRSGTVPTPLVVGLGAACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMN 204
Query: 583 GDAEQTYPGCVNLSFAFVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 404
GD + YPGC+NLSFA+VEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH
Sbjct: 205 GDPKHHYPGCINLSFAYVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 264
Query: 403 SSIRFGLGRFTTIEEVDYTAEKTIRHVERLREMSPLWEMVQEGIDIKTIQWSQH 242
SSIRFG+GRFTT EEVDYT EK I+HV+RLREMSPLWEMVQ+GID+K+I+W+QH
Sbjct: 265 SSIRFGIGRFTTEEEVDYTVEKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH 318
>AF097025-1|AAD09187.2| 457|Homo sapiens cysteine desulfurase
protein.
Length = 457
Score = 277 bits (678), Expect = 4e-74
Identities = 130/174 (74%), Positives = 148/174 (85%)
Frame = -1
Query: 763 GVDRREXMRSGTVPTPLVVGLGAACELAGREMAYDHLWMEKLSKRFLEKINSKLTHVIRN 584
G + MRSGTVPTPLVVGLGAACE+A +EM YDH + KLS+R ++ I L V+ N
Sbjct: 284 GGGQERGMRSGTVPTPLVVGLGAACEVAQQEMEYDHKRISKLSERLIQNIMKSLPDVVMN 343
Query: 583 GDAEQTYPGCVNLSFAFVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 404
GD + YPGC+NLSFA+VEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH
Sbjct: 344 GDPKHHYPGCINLSFAYVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAH 403
Query: 403 SSIRFGLGRFTTIEEVDYTAEKTIRHVERLREMSPLWEMVQEGIDIKTIQWSQH 242
SSIRFG+G FTT EEVDYT EK I+HV RLREMSPLWEMVQ+GID+K+I+W+QH
Sbjct: 404 SSIRFGIGAFTTEEEVDYTVEKCIQHVNRLREMSPLWEMVQDGIDLKSIKWTQH 457
>BC007891-1|AAH07891.1| 445|Homo sapiens selenocysteine lyase
protein.
Length = 445
Score = 60.5 bits (140), Expect = 7e-09
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Frame = -1
Query: 766 WGVDRREXMRSGTVPTPLVVGLGAACELAGREM-AYD-HLW--MEKLSKRFLEKINSKLT 599
+G + R GT TP++ GLG A EL + AY+ H+ + L +R + K
Sbjct: 284 FGGGQERNFRPGTENTPMIAGLGKAAELVTQNCEAYEAHMRDVRDYLEERLEAEFGQKRI 343
Query: 598 HVIRNGDAEQTYPGCVNLSFAF--VEGESLLMALKDVALSSGSACTSA-SLEPSYVLRAI 428
H+ Q P N S ++G +L + + S G+AC S +PS VL +
Sbjct: 344 HLNSQFPGTQRLPNTCNFSIRGPRLQGHVVLAQCRVLMASVGAACHSDHGDQPSPVLLSY 403
Query: 427 GTDEDLAHSSIRFGLGRFTTIEEVDYTAEKTIRHVERLREMS 302
G D+A +++R +GR TT EVD + + V +L + +
Sbjct: 404 GVPFDVARNALRLSVGRSTTRAEVDLVVQDLKQAVAQLEDQA 445
>BC000586-1|AAH00586.2| 427|Homo sapiens SCLY protein protein.
Length = 427
Score = 60.5 bits (140), Expect = 7e-09
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Frame = -1
Query: 766 WGVDRREXMRSGTVPTPLVVGLGAACELAGREM-AYD-HLW--MEKLSKRFLEKINSKLT 599
+G + R GT TP++ GLG A EL + AY+ H+ + L +R + K
Sbjct: 266 FGGGQERNFRPGTENTPMIAGLGKAAELVTQNCEAYEAHMRDVRDYLEERLEAEFGQKRI 325
Query: 598 HVIRNGDAEQTYPGCVNLSFAF--VEGESLLMALKDVALSSGSACTSA-SLEPSYVLRAI 428
H+ Q P N S ++G +L + + S G+AC S +PS VL +
Sbjct: 326 HLNSQFPGTQRLPNTCNFSIRGPRLQGHVVLAQCRVLMASVGAACHSDHGDQPSPVLLSY 385
Query: 427 GTDEDLAHSSIRFGLGRFTTIEEVDYTAEKTIRHVERLREMS 302
G D+A +++R +GR TT EVD + + V +L + +
Sbjct: 386 GVPFDVARNALRLSVGRSTTRAEVDLVVQDLKQAVAQLEDQA 427
>AK001377-1|BAA91659.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ10515 fis, clone NT2RP2000764, weakly similar to
NIFS PROTEIN. ).
Length = 252
Score = 60.5 bits (140), Expect = 7e-09
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Frame = -1
Query: 766 WGVDRREXMRSGTVPTPLVVGLGAACELAGREM-AYD-HLW--MEKLSKRFLEKINSKLT 599
+G + R GT TP++ GLG A EL + AY+ H+ + L +R + K
Sbjct: 91 FGGGQERNFRPGTENTPMIAGLGKAAELVTQNCEAYEAHMRDVRDYLEERLEAEFGQKRI 150
Query: 598 HVIRNGDAEQTYPGCVNLSFAF--VEGESLLMALKDVALSSGSACTSA-SLEPSYVLRAI 428
H+ Q P N S ++G +L + + S G+AC S +PS VL +
Sbjct: 151 HLNSQFPGTQRLPNTCNFSIRGPRLQGHVVLAQCRVLMASVGAACHSDHGDQPSPVLLSY 210
Query: 427 GTDEDLAHSSIRFGLGRFTTIEEVDYTAEKTIRHVERLREMS 302
G D+A +++R +GR TT EVD + + V +L + +
Sbjct: 211 GVPFDVARNALRLSVGRSTTRAEVDLVVQDLKQAVAQLEDQA 252
>AC016757-1|AAY24333.1| 150|Homo sapiens unknown protein.
Length = 150
Score = 55.2 bits (127), Expect = 3e-07
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 7/150 (4%)
Frame = -1
Query: 730 TVPTPLVVGLGAACELAGREM-AYD-HLW--MEKLSKRFLEKINSKLTHVIRNGDAEQTY 563
T TP++ GLG A EL + AY+ H+ + L +R + K H+ Q
Sbjct: 1 TENTPMIAGLGKAAELVTQNCEAYEAHMRDVRDYLEERLEAEFGQKRIHLNSQFPGTQRL 60
Query: 562 PGCVNLSFAF--VEGESLLMALKDVALSSGSACTSA-SLEPSYVLRAIGTDEDLAHSSIR 392
P N S ++G +L + + S G+AC S +PS VL + G D+A +++R
Sbjct: 61 PNTCNFSIRGPRLQGHVVLAQCRVLMASVGAACHSDHGDQPSPVLLSYGVPFDVARNALR 120
Query: 391 FGLGRFTTIEEVDYTAEKTIRHVERLREMS 302
+GR TT EVD + + V +L + +
Sbjct: 121 LSVGRSTTRAEVDLVVQDLKQAVAQLEDQA 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,995,089
Number of Sequences: 237096
Number of extensions: 2595609
Number of successful extensions: 5294
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5290
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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