Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15f22
(813 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011024-1|AAR30184.1| 599|Drosophila melanogaster RE46682p pro... 109 4e-24
AE014298-2048|AAF48383.1| 599|Drosophila melanogaster CG15890-P... 108 1e-23
AY094919-1|AAM11272.1| 461|Drosophila melanogaster RH31685p pro... 89 5e-18
AE014297-1836|AAN13604.1| 601|Drosophila melanogaster CG31321-P... 89 5e-18
AY069864-1|AAL40009.1| 439|Drosophila melanogaster SD10604p pro... 70 4e-12
AE013599-810|AAF58975.2| 439|Drosophila melanogaster CG8008-PA ... 70 4e-12
BT023087-1|AAY55503.1| 335|Drosophila melanogaster IP10913p pro... 64 2e-10
AE014297-4704|AAF57114.2| 497|Drosophila melanogaster CG15553-P... 64 2e-10
AE013599-812|AAM68815.2| 388|Drosophila melanogaster CG8046-PB,... 60 5e-09
AE013599-811|AAF58974.3| 519|Drosophila melanogaster CG8046-PA,... 60 5e-09
BT003488-1|AAO39491.1| 516|Drosophila melanogaster SD23581p pro... 58 1e-08
AY061586-1|AAL29134.1| 388|Drosophila melanogaster SD03610p pro... 58 1e-08
BT025924-1|ABG02168.1| 496|Drosophila melanogaster IP12271p pro... 54 2e-07
AE013599-809|AAM68814.1| 494|Drosophila melanogaster CG30345-PA... 54 2e-07
AY051590-1|AAK93014.1| 507|Drosophila melanogaster GH23453p pro... 48 1e-05
AE013599-808|AAM68813.1| 507|Drosophila melanogaster CG30344-PA... 48 1e-05
BT023897-1|ABA81831.1| 409|Drosophila melanogaster LP13955p pro... 30 3.3
AE014297-459|AAN13376.1| 536|Drosophila melanogaster CG10277-PC... 30 3.3
AE014297-458|AAN13375.1| 536|Drosophila melanogaster CG10277-PB... 30 3.3
AE014297-457|AAF54124.1| 536|Drosophila melanogaster CG10277-PA... 30 3.3
DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 prot... 30 4.3
DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 prot... 30 4.3
DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 prot... 30 4.3
DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 prot... 30 4.3
DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 prot... 30 4.3
DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 prot... 30 4.3
DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 prot... 30 4.3
DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 prot... 30 4.3
BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p pro... 30 4.3
AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA... 30 4.3
AB073024-1|BAB69959.1| 1722|Drosophila melanogaster double-stran... 30 4.3
>BT011024-1|AAR30184.1| 599|Drosophila melanogaster RE46682p
protein.
Length = 599
Score = 109 bits (262), Expect = 4e-24
Identities = 51/132 (38%), Positives = 82/132 (62%)
Frame = -2
Query: 719 LLGAFISISLFSRRLQWNDSVLGLISNCSKIIGSLATGFARNTQEMYIAVAIETFNATSF 540
L+G + + S +L +D+++G++S+ SKI+ S FA + MY+ +E FN T+F
Sbjct: 376 LIGVIFCVGILSHKLNIDDALVGVLSSTSKILSSFVYAFATLPRHMYLGGLVEIFNGTAF 435
Query: 539 TAMRSISSKLVSSDELGKMISVFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYVSTIL 360
AMRSI++KLVS DELGK+ S+F + E L M F+P+Y+ +Y T+++ G + + L
Sbjct: 436 IAMRSIATKLVSKDELGKVNSLFGVAEALMPMVFAPMYTTLYAATLRVLPGAFFLLGGGL 495
Query: 359 AVPPVIIFGWFY 324
+ V IF W Y
Sbjct: 496 TLFSVFIFLWMY 507
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1
Query: 813 ENTVKYLFCRYRFNWDALNYSFYNTFLHLHTLIGCI 706
E V YLF R+RFNW + +SF++T+ LIG I
Sbjct: 345 EMAVTYLFTRFRFNWSEVEFSFFSTYAMFTGLIGVI 380
>AE014298-2048|AAF48383.1| 599|Drosophila melanogaster CG15890-PA
protein.
Length = 599
Score = 108 bits (259), Expect = 1e-23
Identities = 51/132 (38%), Positives = 81/132 (61%)
Frame = -2
Query: 719 LLGAFISISLFSRRLQWNDSVLGLISNCSKIIGSLATGFARNTQEMYIAVAIETFNATSF 540
L+G + + S +L +D+++G++S+ SKI+ S FA MY+ +E FN T+F
Sbjct: 376 LIGVIFCVGILSHKLNIDDALVGVLSSTSKILSSFVYAFATLPWHMYLGGLVEIFNGTAF 435
Query: 539 TAMRSISSKLVSSDELGKMISVFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYVSTIL 360
AMRSI++KLVS DELGK+ S+F + E L M F+P+Y+ +Y T+++ G + + L
Sbjct: 436 IAMRSIATKLVSKDELGKVNSLFGVAEALMPMVFAPMYTTLYAATLRVLPGAFFLLGGGL 495
Query: 359 AVPPVIIFGWFY 324
+ V IF W Y
Sbjct: 496 TLFSVFIFLWMY 507
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1
Query: 813 ENTVKYLFCRYRFNWDALNYSFYNTFLHLHTLIGCI 706
E V YLF R+RFNW + +SF++T+ LIG I
Sbjct: 345 EMAVTYLFTRFRFNWSEVEFSFFSTYAMFTGLIGVI 380
>AY094919-1|AAM11272.1| 461|Drosophila melanogaster RH31685p
protein.
Length = 461
Score = 89.4 bits (212), Expect = 5e-18
Identities = 44/151 (29%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Frame = -2
Query: 719 LLGAFISISLFSRRLQWNDSVLGLISNCSKIIGSLATGFARNTQEMYIAVAIETFNATSF 540
L+G FI ++ S+ L+ +DS++G++S S + + F+ +T Y+A ++ F +
Sbjct: 290 LVGTFIGTAILSKLLKVSDSMIGMLSALSIVCSRVLFAFSSSTASFYVAGVVDMFVSLRV 349
Query: 539 TAMRSISSKLVSSDELGKMISVFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYVSTIL 360
A+++I S +V+ DEL KM S+F + E + F P++S IY TV G I+ I
Sbjct: 350 IAIKTIGSSIVAGDELSKMYSIFGISEPIAQFIFPPIFSEIYKSTVDSFPGAIWLFGEIF 409
Query: 359 AVPPVIIF-GWFYLQHKKSCQKTKCTIIIER 270
+P V++F ++L ++ + K + +E+
Sbjct: 410 YIPNVLVFVVCYFLLRRRKANEEKSVVEMEQ 440
>AE014297-1836|AAN13604.1| 601|Drosophila melanogaster CG31321-PB
protein.
Length = 601
Score = 89.4 bits (212), Expect = 5e-18
Identities = 44/151 (29%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Frame = -2
Query: 719 LLGAFISISLFSRRLQWNDSVLGLISNCSKIIGSLATGFARNTQEMYIAVAIETFNATSF 540
L+G FI ++ S+ L+ +DS++G++S S + + F+ +T Y+A ++ F +
Sbjct: 430 LVGTFIGTAILSKLLKVSDSMIGMLSALSIVCSRVLFAFSSSTASFYVAGVVDMFVSLRV 489
Query: 539 TAMRSISSKLVSSDELGKMISVFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYVSTIL 360
A+++I S +V+ DEL KM S+F + E + F P++S IY TV G I+ I
Sbjct: 490 IAIKTIGSSIVAGDELSKMYSIFGISEPIAQFIFPPIFSEIYKSTVDSFPGAIWLFGEIF 549
Query: 359 AVPPVIIF-GWFYLQHKKSCQKTKCTIIIER 270
+P V++F ++L ++ + K + +E+
Sbjct: 550 YIPNVLVFVVCYFLLRRRKANEEKSVVEMEQ 580
>AY069864-1|AAL40009.1| 439|Drosophila melanogaster SD10604p
protein.
Length = 439
Score = 69.7 bits (163), Expect = 4e-12
Identities = 36/132 (27%), Positives = 70/132 (53%)
Frame = -2
Query: 725 IHLLGAFISISLFSRRLQWNDSVLGLISNCSKIIGSLATGFARNTQEMYIAVAIETFNAT 546
+ ++GA I + + + + L L++ S+I+ +LA GFA MY++V + F +
Sbjct: 291 VPMIGALIGFLILRKVFRLSVVTLALLAFFSEILNNLAKGFATMPWHMYLSVTLGVFRSI 350
Query: 545 SFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYVST 366
S R+I S +V +LGK+ S+ N+++ +PLY+ IY ++ G+ +VS+
Sbjct: 351 SGPMCRTIVSNIVPPSDLGKIFSIKNVLQSFAPFVAAPLYTLIYKRSLTTYPGLFNFVSS 410
Query: 365 ILAVPPVIIFGW 330
L + + G+
Sbjct: 411 FLYLLSFVFIGY 422
Score = 38.7 bits (86), Expect = 0.009
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -1
Query: 807 TVKYLFCRYRFNWDALNYSFYNTFLHLHTLIGCI 706
TV YLF R +F+W +Y+F+ T HL +IG +
Sbjct: 264 TVMYLFVREKFHWTVRDYTFFETVSHLVPMIGAL 297
>AE013599-810|AAF58975.2| 439|Drosophila melanogaster CG8008-PA
protein.
Length = 439
Score = 69.7 bits (163), Expect = 4e-12
Identities = 36/132 (27%), Positives = 70/132 (53%)
Frame = -2
Query: 725 IHLLGAFISISLFSRRLQWNDSVLGLISNCSKIIGSLATGFARNTQEMYIAVAIETFNAT 546
+ ++GA I + + + + L L++ S+I+ +LA GFA MY++V + F +
Sbjct: 291 VPMIGALIGFLILRKVFRLSVVTLALLAFFSEILNNLAKGFATMPWHMYLSVTLGVFRSI 350
Query: 545 SFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYVST 366
S R+I S +V +LGK+ S+ N+++ +PLY+ IY ++ G+ +VS+
Sbjct: 351 SGPMCRTIVSNIVPPSDLGKIFSIKNVLQSFAPFVAAPLYTLIYKRSLTTYPGLFNFVSS 410
Query: 365 ILAVPPVIIFGW 330
L + + G+
Sbjct: 411 FLYLLSFVFIGY 422
Score = 38.7 bits (86), Expect = 0.009
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -1
Query: 807 TVKYLFCRYRFNWDALNYSFYNTFLHLHTLIGCI 706
TV YLF R +F+W +Y+F+ T HL +IG +
Sbjct: 264 TVMYLFVREKFHWTVRDYTFFETVSHLVPMIGAL 297
>BT023087-1|AAY55503.1| 335|Drosophila melanogaster IP10913p
protein.
Length = 335
Score = 64.5 bits (150), Expect = 2e-10
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Frame = -2
Query: 725 IHLLGAFISISLFSRRLQWNDSVLGLISNCSKIIGSLATGFARNTQEMYIAVAIETFNAT 546
+ +LGA + I + + + L L+S S++ ++A GFA + +Y++V + F +
Sbjct: 187 VPMLGAVLGILILRKFFGLSVVALALLSLLSEVAANIARGFAYLSWHLYLSVVLGIFRSI 246
Query: 545 SFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYVST 366
R+I S +V + GK+ ++ N+++ +PLY+ IY ++ N G ++S
Sbjct: 247 QGPMFRTIVSNIVPPSDTGKLFAIGNILQSFAPFVAAPLYTAIYKESLASNPGGFNFLSA 306
Query: 365 ILAVPPVIIFGW---FYLQHKKSCQKT 294
I+ GW +H+K KT
Sbjct: 307 AFYGLAFILIGWVMRIKFKHQKFYAKT 333
>AE014297-4704|AAF57114.2| 497|Drosophila melanogaster CG15553-PA
protein.
Length = 497
Score = 64.5 bits (150), Expect = 2e-10
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Frame = -2
Query: 725 IHLLGAFISISLFSRRLQWNDSVLGLISNCSKIIGSLATGFARNTQEMYIAVAIETFNAT 546
+ +LGA + I + + + L L+S S++ ++A GFA + +Y++V + F +
Sbjct: 349 VPMLGAVLGILILRKFFGLSVVALALLSLLSEVAANIARGFAYLSWHLYLSVVLGIFRSI 408
Query: 545 SFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYVST 366
R+I S +V + GK+ ++ N+++ +PLY+ IY ++ N G ++S
Sbjct: 409 QGPMFRTIVSNIVPPSDTGKLFAIGNILQSFAPFVAAPLYTAIYKESLASNPGGFNFLSA 468
Query: 365 ILAVPPVIIFGW---FYLQHKKSCQKT 294
I+ GW +H+K KT
Sbjct: 469 AFYGLAFILIGWVMRIKFKHQKFYAKT 495
>AE013599-812|AAM68815.2| 388|Drosophila melanogaster CG8046-PB,
isoform B protein.
Length = 388
Score = 59.7 bits (138), Expect = 5e-09
Identities = 35/119 (29%), Positives = 64/119 (53%)
Frame = -2
Query: 662 SVLGLISNCSKIIGSLATGFARNTQEMYIAVAIETFNATSFTAMRSISSKLVSSDELGKM 483
+++ L+S+CS SL GFA + ++Y+A+ + F + R++ + L+ +DE GK+
Sbjct: 264 ALVSLLSHCSS---SLMKGFALESWQIYVAIGLGVFKSLVNPMCRTMITNLLPADERGKI 320
Query: 482 ISVFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYVSTILAVPPVIIFGWFYLQHKKS 306
++ +++ L+ + S LY IY T+ GI S L +I+ G + HKKS
Sbjct: 321 FALLGVLQALSPLISSTLYVAIYTRTLNTEPGIFNVFSAFLFGIGIILLGTVW--HKKS 377
>AE013599-811|AAF58974.3| 519|Drosophila melanogaster CG8046-PA,
isoform A protein.
Length = 519
Score = 59.7 bits (138), Expect = 5e-09
Identities = 35/119 (29%), Positives = 64/119 (53%)
Frame = -2
Query: 662 SVLGLISNCSKIIGSLATGFARNTQEMYIAVAIETFNATSFTAMRSISSKLVSSDELGKM 483
+++ L+S+CS SL GFA + ++Y+A+ + F + R++ + L+ +DE GK+
Sbjct: 395 ALVSLLSHCSS---SLMKGFALESWQIYVAIGLGVFKSLVNPMCRTMITNLLPADERGKI 451
Query: 482 ISVFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYVSTILAVPPVIIFGWFYLQHKKS 306
++ +++ L+ + S LY IY T+ GI S L +I+ G + HKKS
Sbjct: 452 FALLGVLQALSPLISSTLYVAIYTRTLNTEPGIFNVFSAFLFGIGIILLGTVW--HKKS 508
>BT003488-1|AAO39491.1| 516|Drosophila melanogaster SD23581p
protein.
Length = 516
Score = 58.0 bits (134), Expect = 1e-08
Identities = 35/117 (29%), Positives = 60/117 (51%)
Frame = -2
Query: 656 LGLISNCSKIIGSLATGFARNTQEMYIAVAIETFNATSFTAMRSISSKLVSSDELGKMIS 477
L L+S S SL GFA + ++Y+A+ + F + R++ + L+ +DE GK+ +
Sbjct: 391 LALVSLLSHGSSSLMKGFALESWQIYVAIGLGVFKSLVNPMCRTMITNLLPADERGKIFA 450
Query: 476 VFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYVSTILAVPPVIIFGWFYLQHKKS 306
+ +++ L+ + S LY IY T+ GI S L +I+ G + HKKS
Sbjct: 451 LLGVLQALSPLISSTLYVAIYTRTLNTEPGIFNVFSAFLFGIGIILLGTVW--HKKS 505
>AY061586-1|AAL29134.1| 388|Drosophila melanogaster SD03610p
protein.
Length = 388
Score = 58.0 bits (134), Expect = 1e-08
Identities = 35/117 (29%), Positives = 60/117 (51%)
Frame = -2
Query: 656 LGLISNCSKIIGSLATGFARNTQEMYIAVAIETFNATSFTAMRSISSKLVSSDELGKMIS 477
L L+S S SL GFA + ++Y+A+ + F + R++ + L+ +DE GK+ +
Sbjct: 263 LALVSLLSHGSSSLMKGFALESWQIYVAIGLGVFKSLVNPMCRTMITNLLPADERGKIFA 322
Query: 476 VFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYVSTILAVPPVIIFGWFYLQHKKS 306
+ +++ L+ + S LY IY T+ GI S L +I+ G + HKKS
Sbjct: 323 LLGVLQALSPLISSTLYVAIYTRTLNTEPGIFNVFSAFLFGIGIILLGTVW--HKKS 377
>BT025924-1|ABG02168.1| 496|Drosophila melanogaster IP12271p
protein.
Length = 496
Score = 54.0 bits (124), Expect = 2e-07
Identities = 30/121 (24%), Positives = 61/121 (50%)
Frame = -2
Query: 731 ICIHLLGAFISISLFSRRLQWNDSVLGLISNCSKIIGSLATGFARNTQEMYIAVAIETFN 552
+ I ++G+ I++ L R L + ++ L++ ++ S A EMY+A+ +
Sbjct: 344 VVIQVVGSTIAMILLRRLLGLSTIMMTLLAFACCVLESTVRATAVYGSEMYLALMVGMMR 403
Query: 551 ATSFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYV 372
++I S + S ELGK+ S+ ++ ++ + +PLY+ +Y TV GI ++
Sbjct: 404 GVMSPMCKAILSHVTPSSELGKIFSLTTSLQSISPLGAAPLYTAVYQATVNFYPGIFNFI 463
Query: 371 S 369
S
Sbjct: 464 S 464
>AE013599-809|AAM68814.1| 494|Drosophila melanogaster CG30345-PA
protein.
Length = 494
Score = 54.0 bits (124), Expect = 2e-07
Identities = 30/121 (24%), Positives = 61/121 (50%)
Frame = -2
Query: 731 ICIHLLGAFISISLFSRRLQWNDSVLGLISNCSKIIGSLATGFARNTQEMYIAVAIETFN 552
+ I ++G+ I++ L R L + ++ L++ ++ S A EMY+A+ +
Sbjct: 342 VVIQVVGSTIAMILLRRLLGLSTIMMTLLAFACCVLESTVRATAVYGSEMYLALMVGMMR 401
Query: 551 ATSFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYV 372
++I S + S ELGK+ S+ ++ ++ + +PLY+ +Y TV GI ++
Sbjct: 402 GVMSPMCKAILSHVTPSSELGKIFSLTTSLQSISPLGAAPLYTAVYQATVNFYPGIFNFI 461
Query: 371 S 369
S
Sbjct: 462 S 462
>AY051590-1|AAK93014.1| 507|Drosophila melanogaster GH23453p
protein.
Length = 507
Score = 48.4 bits (110), Expect = 1e-05
Identities = 26/124 (20%), Positives = 61/124 (49%)
Frame = -2
Query: 731 ICIHLLGAFISISLFSRRLQWNDSVLGLISNCSKIIGSLATGFARNTQEMYIAVAIETFN 552
I I ++G+ + + + R L+ + + ++S ++ S A QE+Y+ + +
Sbjct: 355 IVIQIVGSIVGMLVLRRVLKMSIVTMAMLSLACCVLESTVRATAVYWQELYLGMTLGMMR 414
Query: 551 ATSFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYV 372
R+I S + + E+GK+ ++ +E ++ + +PLY+ +Y T++ G ++
Sbjct: 415 GVMGPMCRAILSHVAPATEVGKIFALTTSMESVSPLGAAPLYTTVYKATLENYPGAFNFI 474
Query: 371 STIL 360
S L
Sbjct: 475 SAAL 478
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 813 ENTVKYLFCRYRFNWDALNYSFYNTFLHLHTLIGCI 706
E+TV Y+F + +FNW ++S +N + ++G I
Sbjct: 328 ESTVNYMFVQDKFNWTIKDFSLFNASRIVIQIVGSI 363
>AE013599-808|AAM68813.1| 507|Drosophila melanogaster CG30344-PA
protein.
Length = 507
Score = 48.4 bits (110), Expect = 1e-05
Identities = 26/124 (20%), Positives = 61/124 (49%)
Frame = -2
Query: 731 ICIHLLGAFISISLFSRRLQWNDSVLGLISNCSKIIGSLATGFARNTQEMYIAVAIETFN 552
I I ++G+ + + + R L+ + + ++S ++ S A QE+Y+ + +
Sbjct: 355 IVIQIVGSIVGMLVLRRVLKMSIVTMAMLSLACCVLESTVRATAVYWQELYLGMTLGMMR 414
Query: 551 ATSFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTFSPLYSWIYMFTVKINAGIIYYV 372
R+I S + + E+GK+ ++ +E ++ + +PLY+ +Y T++ G ++
Sbjct: 415 GVMGPMCRAILSHVAPATEVGKIFALTTSMESVSPLGAAPLYTTVYKATLENYPGAFNFI 474
Query: 371 STIL 360
S L
Sbjct: 475 SAAL 478
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 813 ENTVKYLFCRYRFNWDALNYSFYNTFLHLHTLIGCI 706
E+TV Y+F + +FNW ++S +N + ++G I
Sbjct: 328 ESTVNYMFVQDKFNWTIKDFSLFNASRIVIQIVGSI 363
>BT023897-1|ABA81831.1| 409|Drosophila melanogaster LP13955p
protein.
Length = 409
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 15 TTKEILV*GLNYNHHLPFRITTQFIVAFS*INKMFSHIMILYNI 146
TT+ +L+ N LPF I TQ I+ FS + M IM++Y I
Sbjct: 29 TTEVVLI----INDELPFNINTQLILPFSILIGMCFIIMVIYMI 68
>AE014297-459|AAN13376.1| 536|Drosophila melanogaster CG10277-PC,
isoform C protein.
Length = 536
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 15 TTKEILV*GLNYNHHLPFRITTQFIVAFS*INKMFSHIMILYNI 146
TT+ +L+ N LPF I TQ I+ FS + M IM++Y I
Sbjct: 156 TTEVVLI----INDELPFNINTQLILPFSILIGMCFIIMVIYMI 195
>AE014297-458|AAN13375.1| 536|Drosophila melanogaster CG10277-PB,
isoform B protein.
Length = 536
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 15 TTKEILV*GLNYNHHLPFRITTQFIVAFS*INKMFSHIMILYNI 146
TT+ +L+ N LPF I TQ I+ FS + M IM++Y I
Sbjct: 156 TTEVVLI----INDELPFNINTQLILPFSILIGMCFIIMVIYMI 195
>AE014297-457|AAF54124.1| 536|Drosophila melanogaster CG10277-PA,
isoform A protein.
Length = 536
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 15 TTKEILV*GLNYNHHLPFRITTQFIVAFS*INKMFSHIMILYNI 146
TT+ +L+ N LPF I TQ I+ FS + M IM++Y I
Sbjct: 156 TTEVVLI----INDELPFNINTQLILPFSILIGMCFIIMVIYMI 195
>DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = -2
Query: 617 LATGFARNTQEMYIAVAIETFNATSFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTF 438
L F + + +Y+A +N + T + SKLVS+ L + ++ + L ++ F
Sbjct: 1208 LGDSFLKLSATLYLASKYSDWNEGTLT---EVKSKLVSNRNLLFCLIDADIPKTLNTIQF 1264
Query: 437 SPLYSWI 417
+P Y+W+
Sbjct: 1265 TPRYTWL 1271
>DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = -2
Query: 617 LATGFARNTQEMYIAVAIETFNATSFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTF 438
L F + + +Y+A +N + T + SKLVS+ L + ++ + L ++ F
Sbjct: 1208 LGDSFLKLSATLYLASKYSDWNEGTLT---EVKSKLVSNRNLLFCLIDADIPKTLNTIQF 1264
Query: 437 SPLYSWI 417
+P Y+W+
Sbjct: 1265 TPRYTWL 1271
>DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = -2
Query: 617 LATGFARNTQEMYIAVAIETFNATSFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTF 438
L F + + +Y+A +N + T + SKLVS+ L + ++ + L ++ F
Sbjct: 1208 LGDSFLKLSATLYLASKYSDWNEGTLT---EVKSKLVSNRNLLFCLIDADIPKTLNTIQF 1264
Query: 437 SPLYSWI 417
+P Y+W+
Sbjct: 1265 TPRYTWL 1271
>DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = -2
Query: 617 LATGFARNTQEMYIAVAIETFNATSFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTF 438
L F + + +Y+A +N + T + SKLVS+ L + ++ + L ++ F
Sbjct: 1208 LGDSFLKLSATLYLASKYSDWNEGTLT---EVKSKLVSNRNLLFCLIDADIPKTLNTIQF 1264
Query: 437 SPLYSWI 417
+P Y+W+
Sbjct: 1265 TPRYTWL 1271
>DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = -2
Query: 617 LATGFARNTQEMYIAVAIETFNATSFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTF 438
L F + + +Y+A +N + T + SKLVS+ L + ++ + L ++ F
Sbjct: 1208 LGDSFLKLSATLYLASKYSDWNEGTLT---EVKSKLVSNRNLLFCLIDADIPKTLNTIQF 1264
Query: 437 SPLYSWI 417
+P Y+W+
Sbjct: 1265 TPRYTWL 1271
>DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = -2
Query: 617 LATGFARNTQEMYIAVAIETFNATSFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTF 438
L F + + +Y+A +N + T + SKLVS+ L + ++ + L ++ F
Sbjct: 1208 LGDSFLKLSATLYLASKYSDWNEGTLT---EVKSKLVSNRNLLFCLIDADIPKTLNTIQF 1264
Query: 437 SPLYSWI 417
+P Y+W+
Sbjct: 1265 TPRYTWL 1271
>DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = -2
Query: 617 LATGFARNTQEMYIAVAIETFNATSFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTF 438
L F + + +Y+A +N + T + SKLVS+ L + ++ + L ++ F
Sbjct: 1208 LGDSFLKLSATLYLASKYSDWNEGTLT---EVKSKLVSNRNLLFCLIDADIPKTLNTIQF 1264
Query: 437 SPLYSWI 417
+P Y+W+
Sbjct: 1265 TPRYTWL 1271
>DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = -2
Query: 617 LATGFARNTQEMYIAVAIETFNATSFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTF 438
L F + + +Y+A +N + T + SKLVS+ L + ++ + L ++ F
Sbjct: 1208 LGDSFLKLSATLYLASKYSDWNEGTLT---EVKSKLVSNRNLLFCLIDADIPKTLNTIQF 1264
Query: 437 SPLYSWI 417
+P Y+W+
Sbjct: 1265 TPRYTWL 1271
>BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p protein.
Length = 1640
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = -2
Query: 617 LATGFARNTQEMYIAVAIETFNATSFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTF 438
L F + + +Y+A +N + T + SKLVS+ L + ++ + L ++ F
Sbjct: 1194 LGDSFLKLSATLYLASKYSDWNEGTLT---EVKSKLVSNRNLLFCLIDADIPKTLNTIQF 1250
Query: 437 SPLYSWI 417
+P Y+W+
Sbjct: 1251 TPRYTWL 1257
>AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA
protein.
Length = 1722
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = -2
Query: 617 LATGFARNTQEMYIAVAIETFNATSFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTF 438
L F + + +Y+A +N + T + SKLVS+ L + ++ + L ++ F
Sbjct: 1215 LGDSFLKLSATLYLASKYSDWNEGTLT---EVKSKLVSNRNLLFCLIDADIPKTLNTIQF 1271
Query: 437 SPLYSWI 417
+P Y+W+
Sbjct: 1272 TPRYTWL 1278
>AB073024-1|BAB69959.1| 1722|Drosophila melanogaster
double-strand-specific ribonucleaseprotein.
Length = 1722
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = -2
Query: 617 LATGFARNTQEMYIAVAIETFNATSFTAMRSISSKLVSSDELGKMISVFNLIEVLTSMTF 438
L F + + +Y+A +N + T + SKLVS+ L + ++ + L ++ F
Sbjct: 1215 LGDSFLKLSATLYLASKYSDWNEGTLT---EVKSKLVSNRNLLFCLIDADIPKTLNTIQF 1271
Query: 437 SPLYSWI 417
+P Y+W+
Sbjct: 1272 TPRYTWL 1278
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,885,629
Number of Sequences: 53049
Number of extensions: 592759
Number of successful extensions: 1256
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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