Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15f18
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 425 e-119
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 425 e-119
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 425 e-119
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 425 e-119
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 425 e-119
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 425 e-119
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 424 e-119
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 424 e-119
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 424 e-119
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 418 e-117
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 400 e-112
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 210 1e-54
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 200 9e-52
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 121 7e-28
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 120 1e-27
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 116 2e-26
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 84 1e-16
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 84 1e-16
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 1e-05
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 32 0.42
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 32 0.55
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 32 0.55
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.97
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.97
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.97
AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical ... 31 0.97
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 31 0.97
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 30 1.7
AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 28 6.8
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 28 6.8
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 28 6.8
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 28 9.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 425 bits (1046), Expect = e-119
Identities = 201/208 (96%), Positives = 205/208 (98%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
GYA PHAIL LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM
Sbjct: 169 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 228
Query: 623 ATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDV 444
ATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+
Sbjct: 229 ATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDI 288
Query: 443 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 264
DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA
Sbjct: 289 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 348
Query: 263 SLSTFQQMWISKQEYDESGPSIVHRKCF 180
SLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 349 SLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 425 bits (1046), Expect = e-119
Identities = 201/208 (96%), Positives = 205/208 (98%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
GYA PHAIL LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM
Sbjct: 169 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 228
Query: 623 ATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDV 444
ATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+
Sbjct: 229 ATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDI 288
Query: 443 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 264
DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA
Sbjct: 289 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 348
Query: 263 SLSTFQQMWISKQEYDESGPSIVHRKCF 180
SLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 349 SLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 425 bits (1046), Expect = e-119
Identities = 201/208 (96%), Positives = 205/208 (98%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
GYA PHAIL LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM
Sbjct: 169 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 228
Query: 623 ATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDV 444
ATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+
Sbjct: 229 ATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDI 288
Query: 443 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 264
DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA
Sbjct: 289 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 348
Query: 263 SLSTFQQMWISKQEYDESGPSIVHRKCF 180
SLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 349 SLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 425 bits (1046), Expect = e-119
Identities = 201/208 (96%), Positives = 205/208 (98%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
GYA PHAIL LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM
Sbjct: 125 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 184
Query: 623 ATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDV 444
ATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+
Sbjct: 185 ATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDI 244
Query: 443 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 264
DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA
Sbjct: 245 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 304
Query: 263 SLSTFQQMWISKQEYDESGPSIVHRKCF 180
SLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 305 SLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 425 bits (1046), Expect = e-119
Identities = 201/208 (96%), Positives = 205/208 (98%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
GYA PHAIL LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM
Sbjct: 155 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 214
Query: 623 ATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDV 444
ATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+
Sbjct: 215 ATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDI 274
Query: 443 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 264
DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA
Sbjct: 275 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 334
Query: 263 SLSTFQQMWISKQEYDESGPSIVHRKCF 180
SLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 335 SLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 425 bits (1046), Expect = e-119
Identities = 201/208 (96%), Positives = 205/208 (98%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
GYA PHAIL LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM
Sbjct: 169 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 228
Query: 623 ATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDV 444
ATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+
Sbjct: 229 ATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDI 288
Query: 443 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 264
DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA
Sbjct: 289 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 348
Query: 263 SLSTFQQMWISKQEYDESGPSIVHRKCF 180
SLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 349 SLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 424 bits (1044), Expect = e-119
Identities = 200/208 (96%), Positives = 205/208 (98%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
GYA PHAIL LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM
Sbjct: 169 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 228
Query: 623 ATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDV 444
ATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+
Sbjct: 229 ATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDI 288
Query: 443 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 264
DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA
Sbjct: 289 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 348
Query: 263 SLSTFQQMWISKQEYDESGPSIVHRKCF 180
SLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 349 SLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 424 bits (1044), Expect = e-119
Identities = 200/208 (96%), Positives = 205/208 (98%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
GYA PHAIL LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM
Sbjct: 169 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 228
Query: 623 ATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDV 444
ATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+
Sbjct: 229 ATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDI 288
Query: 443 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 264
DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA
Sbjct: 289 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 348
Query: 263 SLSTFQQMWISKQEYDESGPSIVHRKCF 180
SLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 349 SLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 424 bits (1044), Expect = e-119
Identities = 200/208 (96%), Positives = 205/208 (98%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
GYA PHAIL LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM
Sbjct: 169 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 228
Query: 623 ATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDV 444
ATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+
Sbjct: 229 ATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDI 288
Query: 443 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 264
DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA
Sbjct: 289 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 348
Query: 263 SLSTFQQMWISKQEYDESGPSIVHRKCF 180
SLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 349 SLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 418 bits (1029), Expect = e-117
Identities = 199/208 (95%), Positives = 204/208 (98%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
GYA PHAIL LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM
Sbjct: 169 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 228
Query: 623 ATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDV 444
ATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+
Sbjct: 229 ATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDI 288
Query: 443 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 264
DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILA
Sbjct: 289 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILA 347
Query: 263 SLSTFQQMWISKQEYDESGPSIVHRKCF 180
SLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 348 SLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 400 bits (985), Expect = e-112
Identities = 189/208 (90%), Positives = 196/208 (94%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
GYA PHAI LDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA DFE E+
Sbjct: 168 GYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESEL 227
Query: 623 ATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDV 444
A AASSSSLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHETTY SIMKCDV
Sbjct: 228 AAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDV 287
Query: 443 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 264
DIRKDLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILA
Sbjct: 288 DIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILA 347
Query: 263 SLSTFQQMWISKQEYDESGPSIVHRKCF 180
SLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 348 SLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 210 bits (512), Expect = 1e-54
Identities = 101/208 (48%), Positives = 137/208 (65%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
G+A HAI +DLAGRD+T+YL +L GY F + E EIVR++KE CY+ALD
Sbjct: 172 GFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD----- 226
Query: 623 ATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDV 444
T ++S++ SY LPD I I N FR PE LF+P +G E G+ SIMKCDV
Sbjct: 227 PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDV 286
Query: 443 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 264
D+R+ LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+A
Sbjct: 287 DLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVA 346
Query: 263 SLSTFQQMWISKQEYDESGPSIVHRKCF 180
SL TF++MW+ K+EY++ G S +H++ F
Sbjct: 347 SLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 200 bits (488), Expect = 9e-52
Identities = 99/212 (46%), Positives = 135/212 (63%), Gaps = 13/212 (6%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
G+A H LD+AGRD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A D EQE
Sbjct: 172 GFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEE 231
Query: 623 ATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDV 444
A ++ L + Y LPDG+VI +G ERF PE LFQP + +E G+ E + I D+
Sbjct: 232 RLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDI 291
Query: 443 DIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERK 297
D R D Y + VLSGGTTMYPG+ R++KE+ L A KI+I APP RK
Sbjct: 292 DTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRK 351
Query: 296 YSVWIGGSILASL--STFQQMWISKQEYDESG 207
+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 352 HMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 121 bits (291), Expect = 7e-28
Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Frame = -1
Query: 587 YELPDGQVITIGNERFRCPEALFQPSFLGMEANG-----IHETTYNSIMKCDVDIRKDLY 423
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 422 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLST 252
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 251 FQQMWISKQEYDESGPSIVHRKC 183
FQQMW+SK EYDESG SIV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 120 bits (289), Expect = 1e-27
Identities = 72/225 (32%), Positives = 116/225 (51%), Gaps = 23/225 (10%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
GY I + +AGRD+T ++ +L +R ++ E+ + IKEK CYV D +E
Sbjct: 190 GYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEF 249
Query: 623 ATA-ASSSSLEKSYELPDGQV-----ITIGNERFRCPEALFQPSFLGME-ANGIHETTYN 465
++ ++Y+ + + +G ERF PE F P F E I +T
Sbjct: 250 VKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDT 309
Query: 464 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA----------------PST 333
I +C +D+R+ LY N VLSGG+TM+ A ++Q+++ L+ P
Sbjct: 310 LIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKP 369
Query: 332 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 198
+ +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 370 IDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 116 bits (279), Expect = 2e-26
Identities = 62/200 (31%), Positives = 109/200 (54%), Gaps = 6/200 (3%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERG---YSFTTTAEREIVRDIKEKLCYVALDFE 633
GY AI + + + D L L+ Y+F + E+ I+R E+ YV D++
Sbjct: 340 GYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLILRFALEQTTYVPEDYQ 399
Query: 632 QEMATAASSS--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGMEANGIHETTYNS 462
+E + + SL+ P Q I N RF C E LF+P G++ G+H+ + +
Sbjct: 400 KEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEA 459
Query: 461 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 282
I++C +D R+ LY N L+GG ++ PGIA+++++E++ + P+T+ ++ P R + ++
Sbjct: 460 ILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYL 519
Query: 281 GGSILASLSTFQQMWISKQE 222
G I+AS STF+ IS Q+
Sbjct: 520 GAQIVASASTFEDSCISLQQ 539
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 83.8 bits (198), Expect = 1e-16
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 25/227 (11%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
G +++ +D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M
Sbjct: 163 GMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESM 220
Query: 623 ATAAS---SSSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPS 510
A + ++ K Y +PD G V I +G ERF PE LF PS
Sbjct: 221 KEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPS 280
Query: 509 FLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM 330
+ ++ G+ E SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+
Sbjct: 281 DIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEY 340
Query: 329 KIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 198
+ + + P+ W G L L+ + WI+++++DE G S+
Sbjct: 341 GLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 83.8 bits (198), Expect = 1e-16
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 25/227 (11%)
Frame = -1
Query: 803 GYAXPHAILXLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 624
G +++ +D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M
Sbjct: 163 GMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESM 220
Query: 623 ATAAS---SSSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPS 510
A + ++ K Y +PD G V I +G ERF PE LF PS
Sbjct: 221 KEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPS 280
Query: 509 FLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM 330
+ ++ G+ E SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+
Sbjct: 281 DIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEY 340
Query: 329 KIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 198
+ + + P+ W G L L+ + WI+++++DE G S+
Sbjct: 341 GLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -1
Query: 461 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 297
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 296 ----YSVWIGGSILASL-STFQQMWISKQEY 219
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = -2
Query: 673 TSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETK---DSVAQRLSSNPRSW 503
T+ S T+ STS+ + P P P+ T+ PT+ PS + + LS+ P
Sbjct: 241 TAVASVTTTASTSTTKTSPTKPPTPTSRPTSAPTIPPQPSANSTRAPDIGKTLSTQP--- 297
Query: 502 VWKPTASTRPHTTP 461
P + +PH P
Sbjct: 298 ---PRRTPQPHPKP 308
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 31.9 bits (69), Expect = 0.55
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = -2
Query: 682 SFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSW 503
S VTS +T++ T++ A S S + T ++PS + + S+N S
Sbjct: 261 SIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSS 320
Query: 502 VWKPTASTRPHTTPS*SAT 446
PT S P P+ +AT
Sbjct: 321 TTSPTTSPTPEPEPTTTAT 339
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 31.9 bits (69), Expect = 0.55
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = -2
Query: 682 SFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSW 503
S VTS +T++ T++ A S S + T ++PS + + S+N S
Sbjct: 243 SIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSS 302
Query: 502 VWKPTASTRPHTTPS*SAT 446
PT S P P+ +AT
Sbjct: 303 TTSPTTSPTPEPEPTTTAT 321
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.1 bits (67), Expect = 0.97
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 285 PYGVLPLWGSNDLNLHCRWGESCD 356
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.1 bits (67), Expect = 0.97
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 285 PYGVLPLWGSNDLNLHCRWGESCD 356
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.1 bits (67), Expect = 0.97
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 285 PYGVLPLWGSNDLNLHCRWGESCD 356
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical
protein F48G7.9 protein.
Length = 125
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -2
Query: 673 TSRRSCATSLSTSSRRWPPLHPAAPS 596
+SRRS S+STS++ WP +APS
Sbjct: 80 SSRRSSLASVSTSTKNWPSKSSSAPS 105
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 31.1 bits (67), Expect = 0.97
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = -2
Query: 661 SCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKPTAS 482
S S ST + P AP+ S TN PT +SP + V+ SS P +
Sbjct: 238 SSTASTSTPAPTNLPTTTGAPTNSTTNPPTA-TSPKTSSQPVSSSTSSTSSPAPTNPPTT 296
Query: 481 TRPHTTPS*SAT 446
+RP T +A+
Sbjct: 297 SRPTTASQSTAS 308
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = +3
Query: 432 LTDVHVALHDGVVCGLVDAVGFHTQERGLEESLWATESFVSDGDDLTVGKFVRLLEGAAG 611
+T +H A V+ G +DA + R E + + D+LTV + +RL+ G
Sbjct: 497 ITGMHQATEGKVMIGGIDANANRAEAR---ELIGYCPQYNPIYDELTVWEHLRLVNALKG 553
Query: 612 CSGG-HLLLEVESDVAQL-LLDVTNDFP--LGGGSER 710
SGG ++ ES + Q+ L D N L GG +R
Sbjct: 554 RSGGSDFKMDAESLLKQIELTDKRNTLAKNLSGGMKR 590
>AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical
protein C10E2.2 protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 631 RRWPPLHPAAPSRSLTNFPTVRSSPSE 551
R+ PLHPA P L N P SSP+E
Sbjct: 144 RQRDPLHPAHPLLPLRNMPYDSSSPTE 170
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -2
Query: 637 SSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKPTA 485
S ++WPP+ +P R N T P E + ++ P V+KP A
Sbjct: 406 SPKKWPPVGTTSPPREPVNRLT---EPDEPSTYTPKPIAYEPEPMVYKPEA 453
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -2
Query: 592 SLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKPTASTRPHTTPS*SATW 443
S T+ T + SET + + +S P +W ++ P T P ++TW
Sbjct: 2501 SETSTSTSSQTVSETDGTTSMFQTSEPSTWQTSNEPTSEPTTVPLETSTW 2550
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -2
Query: 640 TSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKPTASTRPHTTP 461
T S P P++P S T+ PT SPSE + AQ +P S + P++ T +P
Sbjct: 1784 TYSPTSPSYTPSSPQYSPTS-PTYTPSPSEQPGTSAQ---YSPTSPTYSPSSPTYSPASP 1839
Query: 460 S 458
S
Sbjct: 1840 S 1840
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -2
Query: 640 TSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWKPTASTRPHTTP 461
T S P P++P S T+ PT SPSE + AQ +P S + P++ T +P
Sbjct: 1791 TYSPTSPSYTPSSPQYSPTS-PTYTPSPSEQPGTSAQ---YSPTSPTYSPSSPTYSPASP 1846
Query: 460 S 458
S
Sbjct: 1847 S 1847
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = -2
Query: 673 TSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSWVWK 494
T+ + T+ T++ P AP+ + T PT ++ T +V ++ P +
Sbjct: 172 TTTPTTTTTTPTTTTTTPTTTTTAPTTTTTT-PTTTTTTPTTTTTVPTTTTTTPTTTTTT 230
Query: 493 PTASTRPHTTPS*SAT 446
T T TTP+ + T
Sbjct: 231 TTTPTTTTTTPTTTTT 246
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -2
Query: 682 SFVTSRRSCATSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPS 554
S +TS+R + S+SS P + +P RS++ TVRS+PS
Sbjct: 761 SLITSKRVQRQN-SSSSLTSNPRNSISPRRSISPTTTVRSAPS 802
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,001,583
Number of Sequences: 27780
Number of extensions: 422382
Number of successful extensions: 1448
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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