Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt15f17
         (480 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U78525-1|AAC99479.1|  814|Homo sapiens eukaryotic translation in...    58   2e-08
U62583-1|AAB42010.1|  873|Homo sapiens Prt1 homolog protein.           58   2e-08
BC110865-1|AAI10866.1|  814|Homo sapiens eukaryotic translation ...    58   2e-08
BC009986-1|AAH09986.1|  622|Homo sapiens Unknown (protein for IM...    58   2e-08
BC001173-1|AAH01173.1|  814|Homo sapiens EIF3S9 protein protein.       58   2e-08

>U78525-1|AAC99479.1|  814|Homo sapiens eukaryotic translation
           initiation factor protein.
          Length = 814

 Score = 58.0 bits (134), Expect = 2e-08
 Identities = 31/64 (48%), Positives = 40/64 (62%)
 Frame = -3

Query: 442 YYSQFECKDRMRSSKASKELVAKRTEQMKKFSEYRESKIQEWNEQKPRRLXLRDYVDTXG 263
           Y   FE KDR+  SKASKELV +R   M+ F +YR+   + + EQK  RL LR  VDT  
Sbjct: 727 YSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNERLELRGGVDTDE 786

Query: 262 LDTD 251
           LD++
Sbjct: 787 LDSN 790


>U62583-1|AAB42010.1|  873|Homo sapiens Prt1 homolog protein.
          Length = 873

 Score = 58.0 bits (134), Expect = 2e-08
 Identities = 31/64 (48%), Positives = 40/64 (62%)
 Frame = -3

Query: 442 YYSQFECKDRMRSSKASKELVAKRTEQMKKFSEYRESKIQEWNEQKPRRLXLRDYVDTXG 263
           Y   FE KDR+  SKASKELV +R   M+ F +YR+   + + EQK  RL LR  VDT  
Sbjct: 727 YSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNERLELRGGVDTDE 786

Query: 262 LDTD 251
           LD++
Sbjct: 787 LDSN 790


>BC110865-1|AAI10866.1|  814|Homo sapiens eukaryotic translation
           initiation factor 3, subunit B protein.
          Length = 814

 Score = 58.0 bits (134), Expect = 2e-08
 Identities = 31/64 (48%), Positives = 40/64 (62%)
 Frame = -3

Query: 442 YYSQFECKDRMRSSKASKELVAKRTEQMKKFSEYRESKIQEWNEQKPRRLXLRDYVDTXG 263
           Y   FE KDR+  SKASKELV +R   M+ F +YR+   + + EQK  RL LR  VDT  
Sbjct: 727 YSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNERLELRGGVDTDE 786

Query: 262 LDTD 251
           LD++
Sbjct: 787 LDSN 790


>BC009986-1|AAH09986.1|  622|Homo sapiens Unknown (protein for
           IMAGE:4124553) protein.
          Length = 622

 Score = 58.0 bits (134), Expect = 2e-08
 Identities = 31/64 (48%), Positives = 40/64 (62%)
 Frame = -3

Query: 442 YYSQFECKDRMRSSKASKELVAKRTEQMKKFSEYRESKIQEWNEQKPRRLXLRDYVDTXG 263
           Y   FE KDR+  SKASKELV +R   M+ F +YR+   + + EQK  RL LR  VDT  
Sbjct: 535 YSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNERLELRGGVDTDE 594

Query: 262 LDTD 251
           LD++
Sbjct: 595 LDSN 598


>BC001173-1|AAH01173.1|  814|Homo sapiens EIF3S9 protein protein.
          Length = 814

 Score = 58.0 bits (134), Expect = 2e-08
 Identities = 31/64 (48%), Positives = 40/64 (62%)
 Frame = -3

Query: 442 YYSQFECKDRMRSSKASKELVAKRTEQMKKFSEYRESKIQEWNEQKPRRLXLRDYVDTXG 263
           Y   FE KDR+  SKASKELV +R   M+ F +YR+   + + EQK  RL LR  VDT  
Sbjct: 727 YSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNERLELRGGVDTDE 786

Query: 262 LDTD 251
           LD++
Sbjct: 787 LDSN 790


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,189,740
Number of Sequences: 237096
Number of extensions: 700571
Number of successful extensions: 1397
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)