Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15f09
(345 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 24 0.58
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 24 0.58
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 24 0.58
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 24 0.58
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 0.77
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 0.77
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 0.77
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 0.77
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 0.77
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 0.77
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 0.77
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 0.77
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 0.77
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 0.77
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 0.77
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 0.77
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 0.77
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 0.77
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 0.77
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 0.77
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 23 1.3
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 2.3
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 21 4.1
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 4.1
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 4.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 4.1
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 5.4
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 21 5.4
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 21 5.4
AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein. 21 5.4
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 21 5.4
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 20 7.2
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 20 7.2
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 20 9.5
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 20 9.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 9.5
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 20 9.5
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 0.58
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -3
Query: 217 PQSSGPNFVKFATKVANLSKLGPPKPTP 134
P+ GP FV ++ +GPP P P
Sbjct: 126 PRPMGP-FVSMQEQIPRFRYIGPPTPFP 152
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 0.58
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -3
Query: 217 PQSSGPNFVKFATKVANLSKLGPPKPTP 134
P+ GP FV ++ +GPP P P
Sbjct: 126 PRPMGP-FVSMQEQIPRFRYIGPPTPFP 152
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 0.58
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -3
Query: 217 PQSSGPNFVKFATKVANLSKLGPPKPTP 134
P+ GP FV ++ +GPP P P
Sbjct: 126 PRPMGP-FVSMQEQIPRFRYIGPPTPFP 152
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 0.58
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -3
Query: 217 PQSSGPNFVKFATKVANLSKLGPPKPTP 134
P+ GP FV ++ +GPP P P
Sbjct: 126 PRPMGP-FVSMQEQIPRFRYIGPPTPFP 152
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 99 FPPRPIMVRPWVPMRGQVPGSRHIG 123
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 99 FPPRPIMVRPWVPMRGQVPGSRHIG 123
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 99 FPPRPIMVRPWVPMRGQVPGSRHIG 123
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 99 FPPRPIMVRPWVPMRGQVPGSRHIG 123
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 99 FPPRPIMVRPWVPMRGQVPGSRHIG 123
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 99 FPPRPIMVRPWVPMRGQVPGSRHIG 123
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 99 FPPRPIMVRPWVPMRGQVPGSRHIG 123
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 348 FPPRPIMVRPWVPMRGQVPGSRHIG 372
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 348 FPPRPIMVRPWVPMRGQVPGSRHIG 372
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 348 FPPRPIMVRPWVPMRGQVPGSRHIG 372
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 348 FPPRPIMVRPWVPMRGQVPGSRHIG 372
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 348 FPPRPIMVRPWVPMRGQVPGSRHIG 372
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 348 FPPRPIMVRPWVPMRGQVPGSRHIG 372
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 347 FPPRPIMVRPWVPMRGQVPGSRHIG 371
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 332 FPPRPIMVRPWVPMRGQVPGSRHIG 356
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 169 WPPLSQISQSWAPMIGALPSVHRVG 243
+PP + + W PM G +P +G
Sbjct: 348 FPPRPIMVRPWVPMRGQVPGSRHIG 372
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 22.6 bits (46), Expect = 1.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 180 VANFTKLGPDDWGSAFCPSGW 242
+ N T+ P++W S F S W
Sbjct: 153 IVNGTRQPPNNWLSVFWGSAW 173
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.8 bits (44), Expect = 2.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 204 PDDWGSAFCPSGWT 245
P++W S F +GWT
Sbjct: 168 PNNWLSVFNGTGWT 181
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.0 bits (42), Expect = 4.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 121 PLTLWVWVWVGQAW 162
P T WV V+ G AW
Sbjct: 160 PPTNWVGVFGGSAW 173
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.0 bits (42), Expect = 4.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 270 RNKVLSMPQSNPMDRRQSPN 211
R+ +L+ P SNP+ SP+
Sbjct: 431 RDPILTPPSSNPVSPVPSPD 450
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.0 bits (42), Expect = 4.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 144 LGGPSLERLATFVANFTKLGPDDWG 218
LGGP + + V F GP WG
Sbjct: 540 LGGPLVMVCSAPVWRFQPWGPFTWG 564
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.0 bits (42), Expect = 4.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 121 PLTLWVWVWVGQAW 162
P T WV V+ G AW
Sbjct: 160 PPTNWVGVFGGSAW 173
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 160 KLGPPKPTPTTSEAPKDKMD 101
K PP P P++S K+D
Sbjct: 340 KPAPPPPPPSSSGPDSAKLD 359
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 20.6 bits (41), Expect = 5.4
Identities = 7/30 (23%), Positives = 19/30 (63%)
Frame = +2
Query: 17 VIKYTSSDLKRFLLAFII*IAKKSNFLKVH 106
+IK T+ + R+++ + +K++ LK++
Sbjct: 65 IIKSTNEKITRYIIRMFLISQQKTSKLKIY 94
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 20.6 bits (41), Expect = 5.4
Identities = 7/30 (23%), Positives = 19/30 (63%)
Frame = +2
Query: 17 VIKYTSSDLKRFLLAFII*IAKKSNFLKVH 106
+IK T+ + R+++ + +K++ LK++
Sbjct: 48 IIKSTNEKITRYIIRMFLISQQKTSKLKIY 77
>AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein.
Length = 126
Score = 20.6 bits (41), Expect = 5.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 152 AKLGKVGHLCRK 187
AKLGKVG C K
Sbjct: 80 AKLGKVGVHCMK 91
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 247 WHRENFVPGRWNSAATL 297
W R+ F+ RW+ + T+
Sbjct: 157 WSRKGFLRTRWSISGTV 173
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 20.2 bits (40), Expect = 7.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 212 LGLCLLSIGLDCGIERTLFRG 274
L LC++S+ C I + L G
Sbjct: 130 LNLCMISVDRFCAITKPLKYG 150
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 20.2 bits (40), Expect = 7.2
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -2
Query: 167 PFQAWPTQTHTHNVRGAERQNG 102
P Q P+Q H H Q+G
Sbjct: 318 PHQHHPSQYHPHRGSSPHHQHG 339
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 19.8 bits (39), Expect = 9.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 8 YNNVIKYTSSD 40
+NNVIKY + D
Sbjct: 3 FNNVIKYINFD 13
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 49 LSTGVYYLNC*EIKFSKSPF 108
L+ VYY++C EI + + F
Sbjct: 182 LAIKVYYISCPEISVNFAHF 201
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.8 bits (39), Expect = 9.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 16 RYKIYVFRFKTLSTG 60
RY+IYV + + TG
Sbjct: 1432 RYQIYVTAYNGIGTG 1446
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +1
Query: 223 PSVHRVGLWHRENFV 267
PS H++ W R+ F+
Sbjct: 327 PSTHKMAPWVRKIFI 341
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,983
Number of Sequences: 438
Number of extensions: 2574
Number of successful extensions: 37
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 7812315
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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