Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15f07
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 359 2e-99
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 140 9e-34
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 140 1e-33
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 138 5e-33
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 138 5e-33
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 138 5e-33
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 138 6e-33
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 136 1e-32
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 136 1e-32
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 134 1e-31
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 132 2e-31
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 132 2e-31
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 132 2e-31
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 128 7e-30
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 126 2e-29
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 124 6e-29
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 124 6e-29
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 123 1e-28
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 119 3e-27
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 111 6e-25
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 111 8e-25
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 110 1e-24
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 110 1e-24
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 109 3e-24
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 107 1e-23
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 105 4e-23
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 105 4e-23
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 100 3e-21
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 100 3e-21
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 95 4e-20
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 90 2e-18
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 89 5e-18
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 87 2e-17
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 87 2e-17
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 85 6e-17
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 85 6e-17
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 81 1e-15
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 79 3e-15
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 79 3e-15
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 79 4e-15
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 74 2e-13
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 73 4e-13
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 71 8e-13
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 71 8e-13
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 71 8e-13
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 68 8e-12
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 68 8e-12
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 66 2e-11
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 58 8e-09
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 50 1e-08
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 50 1e-08
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 56 3e-08
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 56 3e-08
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 50 2e-06
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 50 2e-06
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 48 7e-06
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 48 1e-05
U00066-10|AAA50744.2| 106|Caenorhabditis elegans Hypothetical p... 43 3e-04
U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related h... 40 0.002
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical pr... 38 0.007
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 38 0.009
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 38 0.012
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 38 0.012
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 37 0.022
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 37 0.022
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 34 0.15
Z66513-3|CAA91331.1| 186|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical ... 29 4.3
Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z66513-2|CAA91330.2| 186|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical protein
F01F1.7 protein.
Length = 730
Score = 359 bits (882), Expect = 2e-99
Identities = 161/245 (65%), Positives = 206/245 (84%)
Frame = -3
Query: 871 NIKPDSDAAEDASVLLANYNTKKKYRQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGK 692
N+K D+D ++ L+ ++T++KYRQTVMFTATM A+ERLAR YLRRPA+V+IGS GK
Sbjct: 484 NMKKDTDEFDNEEALMKGFSTREKYRQTVMFTATMSSAIERLARQYLRRPAVVHIGSAGK 543
Query: 691 PVDRTEQIVYMIGENEKRRKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTL 512
P +R EQ+VYM+ E+ KR+KL E+L+ +PPIIIFVNQKKGAD+L+KGL KLGF L
Sbjct: 544 PTERVEQVVYMVPEDRKRKKLVEVLESQFQPPIIIFVNQKKGADMLSKGLTKLGFKPTVL 603
Query: 511 HGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 332
HGGKGQ+QR++AL +LK G DILVATDVAGRGID+KDVS+V+NYDMAK+IEDYTHRIGR
Sbjct: 604 HGGKGQDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGR 663
Query: 331 TGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPELMNHPEAQHKPGTVVTKKRR 152
TGRAGK GKA++F+T +D+A+++DLKQVL+ S VS+CPPEL NHP+AQ KPG +KKR+
Sbjct: 664 TGRAGKHGKAITFLTPDDTAVYFDLKQVLVESPVSSCPPELANHPDAQSKPGVFTSKKRQ 723
Query: 151 EEMIF 137
+E +F
Sbjct: 724 DETLF 728
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 140 bits (340), Expect = 9e-34
Identities = 76/188 (40%), Positives = 110/188 (58%), Gaps = 4/188 (2%)
Frame = -3
Query: 796 RQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRT-EQIVYMIGENEKRRKLTEI 620
RQT+MF+AT P V LA + + A + +GS+ + Q+V ++ E+ K+ KL E+
Sbjct: 308 RQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLMEL 367
Query: 619 LQRGV---EPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAK 449
L + E IIFV K+ AD L + + + G+ +HG K Q +RD+ L K G
Sbjct: 368 LNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKT 427
Query: 448 DILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSAL 269
I++ATDVA RG+D+ D+ VINYD EDY HRIGRTGR+ K G A +F T +++
Sbjct: 428 PIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASK 487
Query: 268 FYDLKQVL 245
DL +VL
Sbjct: 488 AKDLLKVL 495
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 140 bits (339), Expect = 1e-33
Identities = 71/188 (37%), Positives = 112/188 (59%), Gaps = 1/188 (0%)
Frame = -3
Query: 805 KKYRQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENEKRRKLT 626
K RQT++F+ATMP ++ A+S L +P +V +G G Q + + K ++
Sbjct: 375 KAQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAGAASLNVLQELEFVRSENKLVRVL 434
Query: 625 EILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKD 446
E LQ+ P ++IF +K D + + L G ++HGGK Q R + + + KD
Sbjct: 435 ECLQK-TSPKVLIFAEKKVDVDNIYEYLLVKGVEVASIHGGKDQSDRHAGIEAFRKNEKD 493
Query: 445 ILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKE-DSAL 269
+LVATDVA +G+D + + VIN+DM + IE+Y HRIGRTGR+G+ G A +F+ K+ + ++
Sbjct: 494 VLVATDVASKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSGRKGLATTFINKKSEMSV 553
Query: 268 FYDLKQVL 245
DLKQ+L
Sbjct: 554 LSDLKQLL 561
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 138 bits (334), Expect = 5e-33
Identities = 89/222 (40%), Positives = 122/222 (54%), Gaps = 15/222 (6%)
Frame = -3
Query: 826 LANYNT--KKKYRQTVMFTATMPPAVERLARSYLRRPAIVY-IGSVGKPVDRTEQIVYMI 656
+ NY + KK+ RQT+MF+AT P +V+ AR++L+ I+ I +G Q
Sbjct: 728 IVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIGAANKCVLQEFEKC 787
Query: 655 GENEKRRKLTEILQRGVEP------------PIIIFVNQKKGADVLAKGLEKLGFNACTL 512
+EK+ KL EIL ++ I+FV+Q+ AD LA L A T+
Sbjct: 788 DRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFVSQRAMADTLASILSSAQVPAITI 847
Query: 511 HGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 332
HG + Q +R AL + G+K +L+AT VA RG+DIK V VINYDM I+DY HRIGR
Sbjct: 848 HGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGR 907
Query: 331 TGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPELM 206
TGR G G+A SF++ ED L +L +VL S PE M
Sbjct: 908 TGRVGNAGRATSFIS-EDCNLLSELVRVL--SDADQLVPEWM 946
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 138 bits (334), Expect = 5e-33
Identities = 89/222 (40%), Positives = 122/222 (54%), Gaps = 15/222 (6%)
Frame = -3
Query: 826 LANYNT--KKKYRQTVMFTATMPPAVERLARSYLRRPAIVY-IGSVGKPVDRTEQIVYMI 656
+ NY + KK+ RQT+MF+AT P +V+ AR++L+ I+ I +G Q
Sbjct: 728 IVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIGAANKCVLQEFEKC 787
Query: 655 GENEKRRKLTEILQRGVEP------------PIIIFVNQKKGADVLAKGLEKLGFNACTL 512
+EK+ KL EIL ++ I+FV+Q+ AD LA L A T+
Sbjct: 788 DRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFVSQRAMADTLASILSSAQVPAITI 847
Query: 511 HGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 332
HG + Q +R AL + G+K +L+AT VA RG+DIK V VINYDM I+DY HRIGR
Sbjct: 848 HGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGR 907
Query: 331 TGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPELM 206
TGR G G+A SF++ ED L +L +VL S PE M
Sbjct: 908 TGRVGNAGRATSFIS-EDCNLLSELVRVL--SDADQLVPEWM 946
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 138 bits (334), Expect = 5e-33
Identities = 89/222 (40%), Positives = 122/222 (54%), Gaps = 15/222 (6%)
Frame = -3
Query: 826 LANYNT--KKKYRQTVMFTATMPPAVERLARSYLRRPAIVY-IGSVGKPVDRTEQIVYMI 656
+ NY + KK+ RQT+MF+AT P +V+ AR++L+ I+ I +G Q
Sbjct: 728 IVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIGAANKCVLQEFEKC 787
Query: 655 GENEKRRKLTEILQRGVEP------------PIIIFVNQKKGADVLAKGLEKLGFNACTL 512
+EK+ KL EIL ++ I+FV+Q+ AD LA L A T+
Sbjct: 788 DRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFVSQRAMADTLASILSSAQVPAITI 847
Query: 511 HGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 332
HG + Q +R AL + G+K +L+AT VA RG+DIK V VINYDM I+DY HRIGR
Sbjct: 848 HGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGR 907
Query: 331 TGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPELM 206
TGR G G+A SF++ ED L +L +VL S PE M
Sbjct: 908 TGRVGNAGRATSFIS-EDCNLLSELVRVL--SDADQLVPEWM 946
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 138 bits (333), Expect = 6e-33
Identities = 83/209 (39%), Positives = 122/209 (58%), Gaps = 15/209 (7%)
Frame = -3
Query: 826 LANYNT--KKKYRQTVMFTATMPPAVERLARSYLRRPAI-VYIGSVGKPVDRTEQIVYMI 656
+ NY++ +K+ RQT+MF+AT P +V+ AR++LR + + I +G Q
Sbjct: 517 IVNYDSMPRKENRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIGAANKCVLQEFERC 576
Query: 655 GENEKRRKLTEIL---------QRGVE---PPIIIFVNQKKGADVLAKGLEKLGFNACTL 512
+EK+ KL E+L ++ E ++FV+Q+ AD+LA L A T+
Sbjct: 577 ERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMVFVSQRAMADILASILSSAQVPAITI 636
Query: 511 HGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 332
HG + Q +R AL + G+K +L+AT VA RG+DIK V VINYDM I+DY HRIGR
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGR 696
Query: 331 TGRAGKTGKAMSFVTKEDSALFYDLKQVL 245
TGR G +G+A SF++ ED +L +L VL
Sbjct: 697 TGRVGNSGRATSFIS-EDCSLLSELVGVL 724
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 136 bits (330), Expect = 1e-32
Identities = 83/209 (39%), Positives = 121/209 (57%), Gaps = 15/209 (7%)
Frame = -3
Query: 826 LANYNT--KKKYRQTVMFTATMPPAVERLARSYLRRPAI-VYIGSVGKPVDRTEQIVYMI 656
+ NY++ +K+ RQT+MF+AT P +V+ AR++LR + + I +G Q
Sbjct: 517 IVNYDSMPRKENRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIGAANKCVLQEFERC 576
Query: 655 GENEKRRKLTEIL---------QRGVE---PPIIIFVNQKKGADVLAKGLEKLGFNACTL 512
+EK+ KL E+L ++ E ++FV+Q+ AD LA L A T+
Sbjct: 577 ERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMVFVSQRAMADTLASILSSAQVPAITI 636
Query: 511 HGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 332
HG + Q +R AL + G+K +L+AT VA RG+DIK V VINYDM I+DY HRIGR
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGR 696
Query: 331 TGRAGKTGKAMSFVTKEDSALFYDLKQVL 245
TGR G +G+A SF++ ED +L +L VL
Sbjct: 697 TGRVGNSGRATSFIS-EDCSLLSELVGVL 724
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line helicase
protein 1 protein.
Length = 763
Score = 136 bits (330), Expect = 1e-32
Identities = 83/209 (39%), Positives = 121/209 (57%), Gaps = 15/209 (7%)
Frame = -3
Query: 826 LANYNT--KKKYRQTVMFTATMPPAVERLARSYLRRPAI-VYIGSVGKPVDRTEQIVYMI 656
+ NY++ +K+ RQT+MF+AT P +V+ AR++LR + + I +G Q
Sbjct: 517 IVNYDSMPRKENRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIGAANKCVLQEFERC 576
Query: 655 GENEKRRKLTEIL---------QRGVE---PPIIIFVNQKKGADVLAKGLEKLGFNACTL 512
+EK+ KL E+L ++ E ++FV+Q+ AD LA L A T+
Sbjct: 577 ERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMVFVSQRAMADTLASILSSAQVPAITI 636
Query: 511 HGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 332
HG + Q +R AL + G+K +L+AT VA RG+DIK V VINYDM I+DY HRIGR
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGR 696
Query: 331 TGRAGKTGKAMSFVTKEDSALFYDLKQVL 245
TGR G +G+A SF++ ED +L +L VL
Sbjct: 697 TGRVGNSGRATSFIS-EDCSLLSELVGVL 724
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 134 bits (323), Expect = 1e-31
Identities = 72/180 (40%), Positives = 105/180 (58%), Gaps = 2/180 (1%)
Frame = -3
Query: 814 NTKKKYRQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENEKRR 635
N + +QTV+F+AT P +E LAR L +P + +G Q + E++K
Sbjct: 480 NNIRPDKQTVLFSATFPRHMEALARKVLDKPVEILVGGKSVVCSDITQNAVICAEHQKFL 539
Query: 634 KLTEILQRGVEP-PIIIFVNQKKGADVLAKGLEKLGFNACT-LHGGKGQEQRDFALASLK 461
KL E+L E I+FV++++ AD + L + G+N+ LHGG Q RD ++A K
Sbjct: 540 KLLELLGMYYEEGSSIVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFK 599
Query: 460 GGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKE 281
G +LVAT VA RG+D+K++ +V+NYD EDY HR+GRTGRAG+ G A +FV E
Sbjct: 600 TGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLPE 659
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 132 bits (320), Expect = 2e-31
Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 2/212 (0%)
Frame = -3
Query: 805 KKYRQTVMFTATMPPAVERLARSYLRRPAI-VYIGSVGKPVDRTEQIVYMIGENEKRRKL 629
K R T MF+AT P ++ LA+ +L+ I + +G VG + EQ + + E EKR L
Sbjct: 329 KTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNL 388
Query: 628 TEILQRG-VEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGA 452
EIL E +++FV K+GA+ LA L + + ++HG Q +R+ L + G
Sbjct: 389 MEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQ 448
Query: 451 KDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSA 272
ILVAT VA RG+DI +V VINYD+ ++Y HRIGRTGR G G A SF ++
Sbjct: 449 CPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRG 508
Query: 271 LFYDLKQVLLASSVSTCPPELMNHPEAQHKPG 176
+ DLK +++ S+ PE ++ A+ + G
Sbjct: 509 IGRDLKNLIVESNQEV--PEWLHQVAAEGRIG 538
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 132 bits (320), Expect = 2e-31
Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 2/212 (0%)
Frame = -3
Query: 805 KKYRQTVMFTATMPPAVERLARSYLRRPAI-VYIGSVGKPVDRTEQIVYMIGENEKRRKL 629
K R T MF+AT P ++ LA+ +L+ I + +G VG + EQ + + E EKR L
Sbjct: 313 KTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNL 372
Query: 628 TEILQRG-VEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGA 452
EIL E +++FV K+GA+ LA L + + ++HG Q +R+ L + G
Sbjct: 373 MEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQ 432
Query: 451 KDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSA 272
ILVAT VA RG+DI +V VINYD+ ++Y HRIGRTGR G G A SF ++
Sbjct: 433 CPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRG 492
Query: 271 LFYDLKQVLLASSVSTCPPELMNHPEAQHKPG 176
+ DLK +++ S+ PE ++ A+ + G
Sbjct: 493 IGRDLKNLIVESNQEV--PEWLHQVAAEGRIG 522
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 132 bits (320), Expect = 2e-31
Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 2/212 (0%)
Frame = -3
Query: 805 KKYRQTVMFTATMPPAVERLARSYLRRPAI-VYIGSVGKPVDRTEQIVYMIGENEKRRKL 629
K R T MF+AT P ++ LA+ +L+ I + +G VG + EQ + + E EKR L
Sbjct: 310 KTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNL 369
Query: 628 TEILQRG-VEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGA 452
EIL E +++FV K+GA+ LA L + + ++HG Q +R+ L + G
Sbjct: 370 MEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQ 429
Query: 451 KDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSA 272
ILVAT VA RG+DI +V VINYD+ ++Y HRIGRTGR G G A SF ++
Sbjct: 430 CPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRG 489
Query: 271 LFYDLKQVLLASSVSTCPPELMNHPEAQHKPG 176
+ DLK +++ S+ PE ++ A+ + G
Sbjct: 490 IGRDLKNLIVESNQEV--PEWLHQVAAEGRIG 519
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 128 bits (308), Expect = 7e-30
Identities = 70/202 (34%), Positives = 112/202 (55%), Gaps = 2/202 (0%)
Frame = -3
Query: 832 VLLANYNTKKKYRQTVMFTATMPPAVERLARSYLRRPAI-VYIGSVGKPVDRTEQIVYMI 656
++ N K+ R T MF+AT P ++ LA+ +L+ + + +G VG + Q + +
Sbjct: 349 IVECNRMPSKEERITAMFSATFPKEIQLLAQDFLKENYVFLAVGRVGSTSENIMQKIVWV 408
Query: 655 GENEKRRKLTEILQR-GVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDF 479
E+EKR L ++L G ++FV K+GA LA L + + T+HG Q +R+
Sbjct: 409 EEDEKRSYLMDLLDATGDSSLTLVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQFEREK 468
Query: 478 ALASLKGGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAM 299
L + G ILVAT VA RG+DI +V VINYD+ +++Y HRIGRTGR G G A
Sbjct: 469 HLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLAT 528
Query: 298 SFVTKEDSALFYDLKQVLLASS 233
SF ++ + +L +++ ++
Sbjct: 529 SFFNDKNRNIARELMDLIVEAN 550
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 126 bits (305), Expect = 2e-29
Identities = 72/173 (41%), Positives = 96/173 (55%)
Frame = -3
Query: 796 RQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENEKRRKLTEIL 617
R+T +F+ATM V +L R+ LR PA V + S K VD +Q + K L +L
Sbjct: 219 RRTYLFSATMTKKVSKLERASLRDPARVSVSSRYKTVDNLKQHYIFVPNKYKETYLVYLL 278
Query: 616 QRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILV 437
I+F +A L +LG A LHG QE+R +L K A++ILV
Sbjct: 279 NEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILV 338
Query: 436 ATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKED 278
TDVA RG+DI V MVINYDM +DY HR+GRT RAG++G A++ VT+ D
Sbjct: 339 CTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYD 391
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 124 bits (300), Expect = 6e-29
Identities = 76/198 (38%), Positives = 105/198 (53%), Gaps = 15/198 (7%)
Frame = -3
Query: 826 LANYNT--KKKYRQTVMFTATMPPAVERLARSYLRRP-AIVYIGSVGKPVDRTEQIVYMI 656
+ NY K RQT+MF+AT P +V+ AR LR ++ I +G Q +
Sbjct: 474 IINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIGAANKCVIQEFELC 533
Query: 655 GENEKRRKLTEILQRGVEP------------PIIIFVNQKKGADVLAKGLEKLGFNACTL 512
K KL ++L ++ I+FV Q+K AD LA + A T+
Sbjct: 534 DRTSKVDKLLKLLGIDIDTYTTEKNSDVFVKKTIVFVAQQKMADTLASIMSAAQVPAITI 593
Query: 511 HGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 332
HG + Q++R AL + GAK +L+AT V RG+DIK V VINYDM I+DY HRIGR
Sbjct: 594 HGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGR 653
Query: 331 TGRAGKTGKAMSFVTKED 278
TGR G +G+A SF++ D
Sbjct: 654 TGRVGNSGRATSFISLAD 671
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line helicase
protein 3 protein.
Length = 720
Score = 124 bits (300), Expect = 6e-29
Identities = 76/198 (38%), Positives = 105/198 (53%), Gaps = 15/198 (7%)
Frame = -3
Query: 826 LANYNT--KKKYRQTVMFTATMPPAVERLARSYLRRP-AIVYIGSVGKPVDRTEQIVYMI 656
+ NY K RQT+MF+AT P +V+ AR LR ++ I +G Q +
Sbjct: 474 IINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIGAANKCVIQEFELC 533
Query: 655 GENEKRRKLTEILQRGVEP------------PIIIFVNQKKGADVLAKGLEKLGFNACTL 512
K KL ++L ++ I+FV Q+K AD LA + A T+
Sbjct: 534 DRTSKVDKLLKLLGIDIDTYTTEKNSDVFVKKTIVFVAQQKMADTLASIMSAAQVPAITI 593
Query: 511 HGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 332
HG + Q++R AL + GAK +L+AT V RG+DIK V VINYDM I+DY HRIGR
Sbjct: 594 HGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGR 653
Query: 331 TGRAGKTGKAMSFVTKED 278
TGR G +G+A SF++ D
Sbjct: 654 TGRVGNSGRATSFISLAD 671
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 123 bits (297), Expect = 1e-28
Identities = 74/207 (35%), Positives = 108/207 (52%), Gaps = 6/207 (2%)
Frame = -3
Query: 796 RQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRT-EQIVYMIGENEKRRKLTEI 620
R + +AT P V +L Y + + GS+ ++ Q + + + ++ EI
Sbjct: 268 RLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFEFVPHDSRFLRVCEI 327
Query: 619 LQ-----RGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGG 455
+ G +IIFV K AD L+ G N+ LHGG+ Q R+ +L L+ G
Sbjct: 328 VNFLTAAHGQNYKMIIFVKSKVMADHLSSDFCMKGINSQGLHGGRSQSDREMSLNMLRSG 387
Query: 454 AKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDS 275
ILVATD+A RGID+ D++ V+NYD IE+Y HR+GRTGRAG+ G+AMSF+ D
Sbjct: 388 EVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGEAMSFLWWNDR 447
Query: 274 ALFYDLKQVLLASSVSTCPPELMNHPE 194
+ F L Q+ L S P +L E
Sbjct: 448 SNFEGLIQI-LEKSEQEVPDQLRRDAE 473
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 119 bits (286), Expect = 3e-27
Identities = 72/178 (40%), Positives = 104/178 (58%), Gaps = 5/178 (2%)
Frame = -3
Query: 796 RQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENEKR-----RK 632
RQ +MF+AT VERLAR L P + G VG+ EQ V+++ + + R
Sbjct: 445 RQCLMFSATFKQKVERLARDALVDPVRIVQGEVGEANADIEQKVFVMQNQDVKLHWLIRN 504
Query: 631 LTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGA 452
L E G ++IFV +K ++ +AK L+ F+ LHG Q +R+ L + +
Sbjct: 505 LVEFASLG---KVLIFVTKKLDSEDVAKKLKMKDFDIVLLHGDMLQAERNENLLKFRKKS 561
Query: 451 KDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKED 278
+ ILVATDVA RG+DI ++ VIN+DMA+ I+ + HRIGRTGRAG G A + VT++D
Sbjct: 562 Q-ILVATDVAARGLDISEIRTVINFDMARDIDTHVHRIGRTGRAGHKGTAYTLVTEKD 618
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 111 bits (267), Expect = 6e-25
Identities = 63/200 (31%), Positives = 107/200 (53%), Gaps = 1/200 (0%)
Frame = -3
Query: 805 KKYRQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGK-PVDRTEQIVYMIGENEKRRKL 629
++ +Q +MF+AT+P + + + +++ P VY+ K + +Q + E EK R+L
Sbjct: 207 QEIKQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAEKNRRL 266
Query: 628 TEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAK 449
+L ++IFV K + L + L + F + +H QE+R + K K
Sbjct: 267 LNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQK 326
Query: 448 DILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSAL 269
ILVATD+ GRG+DI+ V++V NYDM + + Y HR+ R GR G G A++FV+ E+ A
Sbjct: 327 RILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDENDAK 386
Query: 268 FYDLKQVLLASSVSTCPPEL 209
+ Q S++ P ++
Sbjct: 387 TLNSVQDRFDISITELPEKI 406
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 111 bits (266), Expect = 8e-25
Identities = 63/197 (31%), Positives = 105/197 (53%), Gaps = 1/197 (0%)
Frame = -3
Query: 796 RQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGK-PVDRTEQIVYMIGENEKRRKLTEI 620
+Q +MF+AT+P + + + +++ P VY+ K + +Q + E EK R+L +
Sbjct: 218 KQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAEKNRRLLNL 277
Query: 619 LQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDIL 440
L ++IFV K + L + L + F + +H QE+R + K K IL
Sbjct: 278 LDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRIL 337
Query: 439 VATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYD 260
VATD+ GRG+DI+ V++V NYDM + + Y HR+ R GR G G A++FV+ E+ A +
Sbjct: 338 VATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDENDAKTLN 397
Query: 259 LKQVLLASSVSTCPPEL 209
Q S++ P ++
Sbjct: 398 SVQDRFDISITELPEKI 414
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 110 bits (264), Expect = 1e-24
Identities = 56/174 (32%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
Frame = -3
Query: 793 QTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENE-KRRKLTEIL 617
Q V+ +ATMP V + ++R P + + ++ Q + ++E K L ++
Sbjct: 204 QVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLY 263
Query: 616 QRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILV 437
+IF N ++ D L + + + F LHG Q +RD + + G+ +L+
Sbjct: 264 NVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLI 323
Query: 436 ATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDS 275
TD+ RGID++ VS+VINYD+ E+Y HRIGR+GR G+ G A++FVT+ D+
Sbjct: 324 TTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDA 377
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 110 bits (264), Expect = 1e-24
Identities = 56/174 (32%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
Frame = -3
Query: 793 QTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENE-KRRKLTEIL 617
Q V+ +ATMP V + ++R P + + ++ Q + ++E K L ++
Sbjct: 204 QVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLY 263
Query: 616 QRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILV 437
+IF N ++ D L + + + F LHG Q +RD + + G+ +L+
Sbjct: 264 NVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLI 323
Query: 436 ATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDS 275
TD+ RGID++ VS+VINYD+ E+Y HRIGR+GR G+ G A++FVT+ D+
Sbjct: 324 TTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDA 377
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 109 bits (262), Expect = 3e-24
Identities = 63/202 (31%), Positives = 103/202 (50%), Gaps = 3/202 (1%)
Frame = -3
Query: 802 KYRQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQ-IVYMIGENEKRRKLT 626
K + F+AT VE+ + + +V +G +Q + Y E+ K+ +
Sbjct: 306 KCTRVAFFSATFSHEVEKWCKENIDEIGMVCVGERNSSNTSVKQKLTYCGTEDGKKIAIR 365
Query: 625 EILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFN--ACTLHGGKGQEQRDFALASLKGGA 452
+L+ +PP ++FV K A L K L + N +++ GK ++RD + + G
Sbjct: 366 NLLRTSFKPPALVFVQSKDRAVQLVKLLSAIDSNLKVDSINSGKSDKERDETMERFRRGE 425
Query: 451 KDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSA 272
+LV T++ GRG+D+ DV +VINYD+ +I Y HR+GRTGRAGK+G A+++ T D
Sbjct: 426 IWVLVCTELLGRGLDLSDVGLVINYDLPTSIVSYIHRVGRTGRAGKSGHAVTYFTDADMK 485
Query: 271 LFYDLKQVLLASSVSTCPPELM 206
+ V+ S P LM
Sbjct: 486 YIKSIATVIRQSGFDV-PEYLM 506
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 107 bits (256), Expect = 1e-23
Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 3/200 (1%)
Frame = -3
Query: 796 RQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIG---ENEKRRKLT 626
RQT++F+ATM ++ LA L++P ++I + Q I E ++ +
Sbjct: 350 RQTLLFSATMTEEIDELASMSLQKPVKIFINENTDTALKLRQEFIRIRAGRETDREAMVA 409
Query: 625 EILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKD 446
++ R + I+FV KK + L LG + Q QR +L+ K D
Sbjct: 410 ALVTRTFQTNTIVFVRTKKDCQRMQILLGLLGIKVGQMQSSLTQGQRIESLSKFKKAEID 469
Query: 445 ILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALF 266
+LV+TD+A RG+DI+ V VIN +M K+I+ Y HR+GRT RAGK G+++S V +++ L
Sbjct: 470 VLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARAGKAGRSISLVGEDERKL- 528
Query: 265 YDLKQVLLASSVSTCPPELM 206
LK+++ +++ T L+
Sbjct: 529 --LKEIVNSNADRTLKQRLV 546
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 105 bits (252), Expect = 4e-23
Identities = 52/182 (28%), Positives = 95/182 (52%), Gaps = 1/182 (0%)
Frame = -3
Query: 793 QTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENE-KRRKLTEIL 617
Q V+ +AT+P + + ++ P + + ++ +Q + E K L ++
Sbjct: 201 QVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLY 260
Query: 616 QRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILV 437
++F N ++ D L +++ F ++HG Q+ RD + + G +L+
Sbjct: 261 DTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLI 320
Query: 436 ATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDL 257
+TDV RG+D+ VS+VINYD+ E Y HRIGR+GR G+ G A++FV ++D + D+
Sbjct: 321 STDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDI 380
Query: 256 KQ 251
+Q
Sbjct: 381 EQ 382
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 105 bits (252), Expect = 4e-23
Identities = 52/182 (28%), Positives = 95/182 (52%), Gaps = 1/182 (0%)
Frame = -3
Query: 793 QTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENE-KRRKLTEIL 617
Q V+ +AT+P + + ++ P + + ++ +Q + E K L ++
Sbjct: 201 QVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLY 260
Query: 616 QRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILV 437
++F N ++ D L +++ F ++HG Q+ RD + + G +L+
Sbjct: 261 DTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLI 320
Query: 436 ATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDL 257
+TDV RG+D+ VS+VINYD+ E Y HRIGR+GR G+ G A++FV ++D + D+
Sbjct: 321 STDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDI 380
Query: 256 KQ 251
+Q
Sbjct: 381 EQ 382
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 99.5 bits (237), Expect = 3e-21
Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Frame = -3
Query: 796 RQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKP----VDRTEQIVYMIGENEKRRKL 629
RQT++ +AT+ + L R R+P + GK VDR EQ + K L
Sbjct: 267 RQTLLLSATITNNINMLHRVSTRKP--YFFEDKGKDDESTVDRLEQKYVVCPVAVKDAYL 324
Query: 628 TEIL----QRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLK 461
++ ++ + ++IF + LA E LGF +LH Q+QR AL++ +
Sbjct: 325 VYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAFR 384
Query: 460 GGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKE 281
+++ TDVA RG+DI V +V+N+++ + + Y HR+GR+ RAG+ G A+SFVT+
Sbjct: 385 SKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQY 444
Query: 280 DSALFYDLKQVL 245
D L ++QV+
Sbjct: 445 DVELLQAVEQVI 456
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 99.5 bits (237), Expect = 3e-21
Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Frame = -3
Query: 796 RQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKP----VDRTEQIVYMIGENEKRRKL 629
RQT++ +AT+ + L R R+P + GK VDR EQ + K L
Sbjct: 267 RQTLLLSATITNNINMLHRVSTRKP--YFFEDKGKDDESTVDRLEQKYVVCPVAVKDAYL 324
Query: 628 TEIL----QRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLK 461
++ ++ + ++IF + LA E LGF +LH Q+QR AL++ +
Sbjct: 325 VYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAFR 384
Query: 460 GGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKE 281
+++ TDVA RG+DI V +V+N+++ + + Y HR+GR+ RAG+ G A+SFVT+
Sbjct: 385 SKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQY 444
Query: 280 DSALFYDLKQVL 245
D L ++QV+
Sbjct: 445 DVELLQAVEQVI 456
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 95.5 bits (227), Expect = 4e-20
Identities = 55/190 (28%), Positives = 97/190 (51%)
Frame = -3
Query: 814 NTKKKYRQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENEKRR 635
N K RQ ++++AT P V + ++ +P + + + T+ + + E +K
Sbjct: 211 NFLPKERQVMLYSATFPNTVTSFMQKHMHKPYEINLMEELTLLGVTQYYAF-VQEKQKVH 269
Query: 634 KLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGG 455
L + ++ IIF N + ++LAK + ++G++ +H Q R+ + G
Sbjct: 270 CLNTLFRKLQINQSIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQG 329
Query: 454 AKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDS 275
LV +D+ RGIDI+ V++VIN+D + E Y HRIGR+GR G G A++ +T ED
Sbjct: 330 NCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDR 389
Query: 274 ALFYDLKQVL 245
++Q L
Sbjct: 390 HTLRRIEQEL 399
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 90.2 bits (214), Expect = 2e-18
Identities = 38/85 (44%), Positives = 56/85 (65%)
Frame = -3
Query: 529 FNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDY 350
F LHG Q +RD + + G+ +L+ TD+ RGID++ VS+VINYD+ E+Y
Sbjct: 6 FTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENY 65
Query: 349 THRIGRTGRAGKTGKAMSFVTKEDS 275
HRIGR+GR G+ G A++FVT+ D+
Sbjct: 66 IHRIGRSGRFGRKGVAINFVTENDA 90
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical protein
F58G11.2 protein.
Length = 960
Score = 88.6 bits (210), Expect = 5e-18
Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Frame = -3
Query: 796 RQTVMFTATMPPAVERLARSYLRR-----PAIVYIGSVGKPVDRTE-QIVYMIGENEKRR 635
RQT+M +AT +V +A ++R I + + G+ R + G EK
Sbjct: 573 RQTIMTSATFNASVMTVANELMKRLPGQDEMIKIVLANGRLSKRVNLEFFECKGLAEKNA 632
Query: 634 KLTEILQRGVEPPI---IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASL 464
KL EIL++ V IIFV +K D A L G A TLHG + Q+ R+ +
Sbjct: 633 KLREILKQNVNGKTLKTIIFVQKKDQCDACAAKLTSGGMLAQTLHGDRSQDMREKLINDF 692
Query: 463 KGGAKDILVATDVAGRGIDIKDVSMVINYDMA-----KTIEDYTHRIGRTGRAGK--TGK 305
K ++LV TD+ RGID+ D+ VIN+D+ + + + HR GRTGR G+ G
Sbjct: 693 KSNRVNLLVTTDLLSRGIDVSDLDRVINFDLPDGDPDQGADTFIHRAGRTGRTGRKENGL 752
Query: 304 AMSFV---TKEDSALFYDLKQVLLASSV 230
+SFV + DS L L +++++ ++
Sbjct: 753 CVSFVDPQSDRDSLLAPKLVELIISQNL 780
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 87.0 bits (206), Expect = 2e-17
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 16/209 (7%)
Frame = -3
Query: 856 SDAAEDASVLLANYNTKKKYRQTVMFTATMPPAVER--LARSYLRRPAIVYIGSVGKPVD 683
+D E+ S ++ + ++ +QTV+F+A+ ++ L + ++ + G +
Sbjct: 906 NDFGEEVSKIIGSPG--ERTQQTVLFSASFSEDLQSDDLPKFVKEGYTMLQVDKFGTANE 963
Query: 682 RTEQIVYMIGENEKRRKLTEIL---QRGV----EPPI-----IIFVNQKKGADVLAKGLE 539
+ +Q + + EKR + ++L + V + PI +IFVN K D LA +
Sbjct: 964 KIDQKILPVPRTEKRDAIYKLLGIDENTVTLLPDAPIEKQKTLIFVNSVKFCDTLAALIS 1023
Query: 538 KLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDVSMVINYDM--AK 365
G + ++H + QEQRD L + G +VA++V RG++I + V+NYDM
Sbjct: 1024 SAGVSTISMHSYQNQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMPDKN 1083
Query: 364 TIEDYTHRIGRTGRAGKTGKAMSFVTKED 278
++Y +RIGRTGRAG TG + +FV E+
Sbjct: 1084 GFDEYVNRIGRTGRAGFTGTSTAFVDVEN 1112
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 87.0 bits (206), Expect = 2e-17
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 16/209 (7%)
Frame = -3
Query: 856 SDAAEDASVLLANYNTKKKYRQTVMFTATMPPAVER--LARSYLRRPAIVYIGSVGKPVD 683
+D E+ S ++ + ++ +QTV+F+A+ ++ L + ++ + G +
Sbjct: 906 NDFGEEVSKIIGSPG--ERTQQTVLFSASFSEDLQSDDLPKFVKEGYTMLQVDKFGTANE 963
Query: 682 RTEQIVYMIGENEKRRKLTEIL---QRGV----EPPI-----IIFVNQKKGADVLAKGLE 539
+ +Q + + EKR + ++L + V + PI +IFVN K D LA +
Sbjct: 964 KIDQKILPVPRTEKRDAIYKLLGIDENTVTLLPDAPIEKQKTLIFVNSVKFCDTLAALIS 1023
Query: 538 KLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDVSMVINYDM--AK 365
G + ++H + QEQRD L + G +VA++V RG++I + V+NYDM
Sbjct: 1024 SAGVSTISMHSYQNQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMPDKN 1083
Query: 364 TIEDYTHRIGRTGRAGKTGKAMSFVTKED 278
++Y +RIGRTGRAG TG + +FV E+
Sbjct: 1084 GFDEYVNRIGRTGRAGFTGTSTAFVDVEN 1112
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 85.0 bits (201), Expect = 6e-17
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Frame = -3
Query: 814 NTKKKYRQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGE-NEKR 638
N+ + RQ +F+AT P ++ L ++LR A+V + + +Q Y++ + +
Sbjct: 190 NSLPQIRQVAVFSATYPRNLDNLLSTFLRDAALVRFNADDVQLFGIKQ--YVVAKCSPML 247
Query: 637 RKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKG 458
KLT +L+ ++F +Q + +A L+ G + + Q+ R A+ L+
Sbjct: 248 EKLTHVLKSIRYVQALVFCDQISKCEPIATHLKSSGLDVTFVSSAMSQKDRQLAVDQLRA 307
Query: 457 GAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKE 281
ILV++D+ RGID +V++V+N D A E Y HRIGR R G G A++ + E
Sbjct: 308 KRVKILVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAARFGAHGAAVTLLEDE 366
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 85.0 bits (201), Expect = 6e-17
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Frame = -3
Query: 814 NTKKKYRQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGE-NEKR 638
N+ + RQ +F+AT P ++ L ++LR A+V + + +Q Y++ + +
Sbjct: 190 NSLPQIRQVAVFSATYPRNLDNLLSTFLRDAALVRFNADDVQLFGIKQ--YVVAKCSPML 247
Query: 637 RKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKG 458
KLT +L+ ++F +Q + +A L+ G + + Q+ R A+ L+
Sbjct: 248 EKLTHVLKSIRYVQALVFCDQISKCEPIATHLKSSGLDVTFVSSAMSQKDRQLAVDQLRA 307
Query: 457 GAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKE 281
ILV++D+ RGID +V++V+N D A E Y HRIGR R G G A++ + E
Sbjct: 308 KRVKILVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAARFGAHGAAVTLLEDE 366
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 80.6 bits (190), Expect = 1e-15
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Frame = -3
Query: 793 QTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENE-KRRKLTEIL 617
Q V+ +ATMP V + ++R P + + ++ Q + ++E K L ++L
Sbjct: 163 QVVLLSATMPSEVLDVTNRFMRDPIRILVKKDELTLEGIRQFYINVQKDEWKFNCLCDLL 222
Query: 616 QRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILV 437
+ E +IF N ++ L + L + HG +R+ + +LV
Sbjct: 223 KTSRETQALIFCNTRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLV 282
Query: 436 ATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDL 257
TD+ RG++I+ S++INYD++ +E+Y R GR G G G +SF T+ D + DL
Sbjct: 283 TTDLMARGMNIRK-SLIINYDVSGNMENYMLRNGRQGNFGSKGLPISFFTENDIS---DL 338
Query: 256 KQV 248
K++
Sbjct: 339 KKI 341
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 79.4 bits (187), Expect = 3e-15
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 2/182 (1%)
Frame = -3
Query: 796 RQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENEKRRKLTEIL 617
RQT++F+AT+P + A++ L P +V + K D+ + M +EK L +
Sbjct: 199 RQTLLFSATLPKMLVDFAKAGLTDPMLVRLDVDEKVSDKLSMVFCMCRPDEKLFALLHLC 258
Query: 616 QR--GVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDI 443
+R ++F K + + L + G + ++ R + +I
Sbjct: 259 RRMDRENKQTVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNI 318
Query: 442 LVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFY 263
LV TDVA RG+DI + VIN + + HR+GR RAG++G A+S + ++
Sbjct: 319 LVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPYLT 378
Query: 262 DL 257
DL
Sbjct: 379 DL 380
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 79.4 bits (187), Expect = 3e-15
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 2/182 (1%)
Frame = -3
Query: 796 RQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENEKRRKLTEIL 617
RQT++F+AT+P + A++ L P +V + K D+ + M +EK L +
Sbjct: 199 RQTLLFSATLPKMLVDFAKAGLTDPMLVRLDVDEKVSDKLSMVFCMCRPDEKLFALLHLC 258
Query: 616 QR--GVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDI 443
+R ++F K + + L + G + ++ R + +I
Sbjct: 259 RRMDRENKQTVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNI 318
Query: 442 LVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFY 263
LV TDVA RG+DI + VIN + + HR+GR RAG++G A+S + ++
Sbjct: 319 LVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPYLT 378
Query: 262 DL 257
DL
Sbjct: 379 DL 380
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 79.0 bits (186), Expect = 4e-15
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
Frame = -3
Query: 796 RQTVMFTATMPPAVERLARSYLRRPAIVYI---GSVGKPVDRTEQIVYMIGENEKRRKLT 626
RQT++F+AT V+ L R P V + S P D +Q ++ E K L
Sbjct: 254 RQTLLFSATQTRNVKDLCRVCTNDPVFVSVHENASAATP-DNLKQSYVIVEEEHKINALW 312
Query: 625 EILQRGVEPPIIIFVNQKKGADVLAKGLEKL--GFNACTLHGGKGQEQRDFALASLKGGA 452
++ + ++FV+ K A L + +L G L G Q++R
Sbjct: 313 SFIEAHRKKKSLVFVSSCKQARFLTEAFSQLRPGLPVMGLWGTMNQKKRIETFTKFDESK 372
Query: 451 KDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVT-KEDS 275
+L+ATDVA RG+D + + VI D I+DY HR+GR+ R +G ++ V+ ++
Sbjct: 373 AAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRSARMDDSGNSLLMVSPSQEE 432
Query: 274 ALFYDLKQ 251
A+ L++
Sbjct: 433 AMIGKLEK 440
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 73.7 bits (173), Expect = 2e-13
Identities = 37/110 (33%), Positives = 59/110 (53%)
Frame = -3
Query: 592 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 413
I+F K+ D + L++ +A LHG + E+R +L K G LV +DV RG
Sbjct: 509 IVFCRTKQQCDHMEHFLQQNNLSAACLHGDRSAEERQSSLEGFKKGIIRFLVCSDVVARG 568
Query: 412 IDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFY 263
+D++ V VI+ + Y HRIGR GRA + G ++S V++ + +Y
Sbjct: 569 LDVQGVPFVISVTLPDEKSMYVHRIGRVGRAERMGLSISLVSEYEEKAWY 618
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 72.5 bits (170), Expect = 4e-13
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 5/188 (2%)
Frame = -3
Query: 802 KYRQTVMFTATMPPAVERLARSYLR-RPAIVYIGSVGKP--VDRTEQIVYMIGENEKRRK 632
K RQ+++F+AT P V+ L + L P V + + V+ +Q Y++ ++KR
Sbjct: 245 KQRQSMLFSATHSPKVDELVKLALHSNPVRVSVHEKAEEATVEGLQQ-GYIVAPSDKRLL 303
Query: 631 LT-EILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGG 455
L L++ +++F + + L + ++HG + Q++R
Sbjct: 304 LLFTFLKKNKTKKVMVFFSSCNSVKFHHELLNYIDIPCMSIHGKQKQQKRTTTFFQFCQA 363
Query: 454 AKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGR-AGKTGKAMSFVTKED 278
IL+ TDVA RG+DI V ++ YD +Y HR+GRT R +GKA+ + E+
Sbjct: 364 ETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIHRVGRTARGTNGSGKALLVLRPEE 423
Query: 277 SALFYDLK 254
LK
Sbjct: 424 LGFLRYLK 431
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 71.3 bits (167), Expect = 8e-13
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 18/191 (9%)
Frame = -3
Query: 793 QTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENEKRRKLTEILQ 614
Q+++F+AT V A ++ +V + + + +Q + + L
Sbjct: 391 QSMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLY 450
Query: 613 RGVE-PPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILV 437
G+ +IF + K L + + G LHG +R + K G +L+
Sbjct: 451 SGLAVASSVIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLI 510
Query: 436 ATDVAGRGIDIKDVSMVINYDM-----------------AKTIEDYTHRIGRTGRAGKTG 308
T+V RGID+ VS+VINYD+ E Y HRIGRTGR GKTG
Sbjct: 511 TTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTG 570
Query: 307 KAMSFVTKEDS 275
A++ + EDS
Sbjct: 571 IAINLIDSEDS 581
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 71.3 bits (167), Expect = 8e-13
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 18/191 (9%)
Frame = -3
Query: 793 QTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENEKRRKLTEILQ 614
Q+++F+AT V A ++ +V + + + +Q + + L
Sbjct: 416 QSMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLY 475
Query: 613 RGVE-PPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILV 437
G+ +IF + K L + + G LHG +R + K G +L+
Sbjct: 476 SGLAVASSVIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLI 535
Query: 436 ATDVAGRGIDIKDVSMVINYDM-----------------AKTIEDYTHRIGRTGRAGKTG 308
T+V RGID+ VS+VINYD+ E Y HRIGRTGR GKTG
Sbjct: 536 TTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTG 595
Query: 307 KAMSFVTKEDS 275
A++ + EDS
Sbjct: 596 IAINLIDSEDS 606
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 71.3 bits (167), Expect = 8e-13
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 18/191 (9%)
Frame = -3
Query: 793 QTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENEKRRKLTEILQ 614
Q+++F+AT V A ++ +V + + + +Q + + L
Sbjct: 800 QSMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLY 859
Query: 613 RGVE-PPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILV 437
G+ +IF + K L + + G LHG +R + K G +L+
Sbjct: 860 SGLAVASSVIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLI 919
Query: 436 ATDVAGRGIDIKDVSMVINYDM-----------------AKTIEDYTHRIGRTGRAGKTG 308
T+V RGID+ VS+VINYD+ E Y HRIGRTGR GKTG
Sbjct: 920 TTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTG 979
Query: 307 KAMSFVTKEDS 275
A++ + EDS
Sbjct: 980 IAINLIDSEDS 990
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 68.1 bits (159), Expect = 8e-12
Identities = 43/119 (36%), Positives = 58/119 (48%)
Frame = -3
Query: 646 EKRRKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALAS 467
EK L +L R I+FVN A L L+ + + LH Q+QR L
Sbjct: 260 EKDTSLVYLLTR-YPGRTIVFVNSIDAARRLYSVLKSVNIDPMILHAKMIQKQRLKNLEK 318
Query: 466 LKGGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFV 290
+L+ATDVA RG+DI+ + VI+Y + K +E Y HR GRT RA G + V
Sbjct: 319 FSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARASHRGLTVVLV 377
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 68.1 bits (159), Expect = 8e-12
Identities = 43/119 (36%), Positives = 58/119 (48%)
Frame = -3
Query: 646 EKRRKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALAS 467
EK L +L R I+FVN A L L+ + + LH Q+QR L
Sbjct: 427 EKDTSLVYLLTR-YPGRTIVFVNSIDAARRLYSVLKSVNIDPMILHAKMIQKQRLKNLEK 485
Query: 466 LKGGAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFV 290
+L+ATDVA RG+DI+ + VI+Y + K +E Y HR GRT RA G + V
Sbjct: 486 FSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARASHRGLTVVLV 544
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 66.5 bits (155), Expect = 2e-11
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 4/181 (2%)
Frame = -3
Query: 802 KYRQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIG--ENEKRRKL 629
K R+T +F+AT + L LR V + + Y + +EK
Sbjct: 189 KQRRTGLFSATQVKEEDDLMVFGLRNAKQVKVAQERNSAAPSTLKNYYVECRADEKTSVC 248
Query: 628 TEILQRGVEPPIIIFVNQKKGADVLAKGLEK-LGFNAC-TLHGGKGQEQRDFALASLKGG 455
E +++ + I+IF K E+ LG +HG R + +
Sbjct: 249 LEFIRQRTDKKILIFFPSCNSVRYFYKIFERCLGKRPLFAVHGKCSNPHRASQIKAFSDS 308
Query: 454 AKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDS 275
++++TDV RGIDI D+ VI +D+ K + HR GRT R G+ G A+ + E
Sbjct: 309 TNGVMISTDVMARGIDISDIDWVIQFDLPKHSSWFVHRAGRTARCGREGNALILIASEQL 368
Query: 274 A 272
A
Sbjct: 369 A 369
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 60.5 bits (140), Expect = 2e-09
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Frame = -3
Query: 592 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQ---EQRDFALASLKGGAKDILVATDVA 422
+IFVN+ ++ LA L++L + + Q ++R L +L+ +DV
Sbjct: 400 LIFVNEVSSSNRLAHVLKELCKDQFEVDYFTAQLFGKRRYKMLEKFNKNENRVLICSDVL 459
Query: 421 GRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQV 248
RG D+ V VINY++ + + HR GRTGRAG+ G +S KE LF + +V
Sbjct: 460 ARGTDLNKVDCVINYNLPADDKLFVHRAGRTGRAGQDGYVISVGDKESKRLFVKMLKV 517
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 58.0 bits (134), Expect = 8e-09
Identities = 38/119 (31%), Positives = 50/119 (42%)
Frame = -3
Query: 634 KLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGG 455
K E+ R P II+ K+ D + L ++G + H G + QR+ A
Sbjct: 436 KTDEVKGRHFGGPTIIYCQTKQMVDDVNCVLRRIGVRSAHYHAGLTKNQREKAHTDFMRD 495
Query: 454 AKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKED 278
+VAT G GID DV VI+Y IE Y IGR GR G F +D
Sbjct: 496 KITTIVATVAFGMGIDKPDVRNVIHYGCPNNIESYYQEIGRAGRDGSPSICRVFWAPKD 554
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 49.6 bits (113), Expect(2) = 1e-08
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = -3
Query: 418 RGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSA 272
RGID VS V+N+D +T + Y HR+GRT R G A+SF + A
Sbjct: 437 RGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERA 485
Score = 27.9 bits (59), Expect(2) = 1e-08
Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Frame = -3
Query: 793 QTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMI--GENEKRRKLTEI 620
Q +M +AT+ + L + ++ P I + G + + Y + G +E+R +
Sbjct: 270 QCLMTSATLKDDMTTLKKLFMTGPVITIKLTEGDLPNSDQLTQYQLTCGSDEERFAILVA 329
Query: 619 L--QRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKD 446
+ + + I+FVN L L G +C L+ R + G+
Sbjct: 330 MFKLKLIVGRSILFVNTIDRCYKLMLILRVFGLKSCILNSAMPANSRCHVINQFNEGSYQ 389
Query: 445 ILVATDVA 422
I++A+DV+
Sbjct: 390 IVIASDVS 397
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 49.6 bits (113), Expect(2) = 1e-08
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = -3
Query: 418 RGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSA 272
RGID VS V+N+D +T + Y HR+GRT R G A+SF + A
Sbjct: 370 RGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERA 418
Score = 27.9 bits (59), Expect(2) = 1e-08
Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Frame = -3
Query: 793 QTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMI--GENEKRRKLTEI 620
Q +M +AT+ + L + ++ P I + G + + Y + G +E+R +
Sbjct: 203 QCLMTSATLKDDMTTLKKLFMTGPVITIKLTEGDLPNSDQLTQYQLTCGSDEERFAILVA 262
Query: 619 L--QRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKD 446
+ + + I+FVN L L G +C L+ R + G+
Sbjct: 263 MFKLKLIVGRSILFVNTIDRCYKLMLILRVFGLKSCILNSAMPANSRCHVINQFNEGSYQ 322
Query: 445 ILVATDVA 422
I++A+DV+
Sbjct: 323 IVIASDVS 330
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 56.4 bits (130), Expect = 3e-08
Identities = 33/106 (31%), Positives = 46/106 (43%)
Frame = -3
Query: 592 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 413
I++ +K + + L K G +A H G R S D++ AT G G
Sbjct: 473 IVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQRSWIANKFDVICATIAFGMG 532
Query: 412 IDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDS 275
ID DV VI+Y + K+IE Y GR GR G + + DS
Sbjct: 533 IDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHDS 578
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 56.4 bits (130), Expect = 3e-08
Identities = 33/106 (31%), Positives = 46/106 (43%)
Frame = -3
Query: 592 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 413
I++ +K + + L K G +A H G R S D++ AT G G
Sbjct: 473 IVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQRSWIANKFDVICATIAFGMG 532
Query: 412 IDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDS 275
ID DV VI+Y + K+IE Y GR GR G + + DS
Sbjct: 533 IDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHDS 578
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 54.4 bits (125), Expect = 1e-07
Identities = 30/105 (28%), Positives = 47/105 (44%)
Frame = -3
Query: 592 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 413
I++ + +AK LE G A H G G++ R+ ++ AT G G
Sbjct: 418 IVYCRSRNECGQVAKMLEIAGIPAMAYHAGLGKKDRNEVQEKWMNNEIPVVAATVAFGMG 477
Query: 412 IDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKED 278
ID DV VI++ ++ + Y GR GR GK + +K+D
Sbjct: 478 IDKPDVRAVIHWSPSQNLAGYYQEAGRAGRDGKRSYCRIYYSKQD 522
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 50.4 bits (115), Expect = 2e-06
Identities = 31/105 (29%), Positives = 47/105 (44%)
Frame = -3
Query: 592 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 413
II+ + + +AK L+ G A H R A G ++VAT G G
Sbjct: 313 IIYCLSRNDCEKVAKALKSHGIKAKHYHAYMEPVDRSGAHQGWISGKIQVIVATVAFGMG 372
Query: 412 IDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKED 278
ID +V VI++ + K+IE+Y GR GR G+ + + D
Sbjct: 373 IDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYYRLAD 417
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 50.4 bits (115), Expect = 2e-06
Identities = 31/105 (29%), Positives = 47/105 (44%)
Frame = -3
Query: 592 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 413
II+ + + +AK L+ G A H R A G ++VAT G G
Sbjct: 336 IIYCLSRNDCEKVAKALKSHGIKAKHYHAYMEPVDRSGAHQGWISGKIQVIVATVAFGMG 395
Query: 412 IDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKED 278
ID +V VI++ + K+IE+Y GR GR G+ + + D
Sbjct: 396 IDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYYRLAD 440
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 48.4 bits (110), Expect = 7e-06
Identities = 29/98 (29%), Positives = 45/98 (45%)
Frame = -3
Query: 595 IIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGR 416
I IF + L ++G+N + ++Q+ L L+ +V T++ R
Sbjct: 377 IAIFCETVSRVIQVTMALRQMGYNFKPVCSSVLKQQQAITLNDLEFCNIHGVVCTNIMSR 436
Query: 415 GIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKA 302
GID+ V I +M+ Y HRIGR GR G G+A
Sbjct: 437 GIDVSSVKQTIIMEMSTDFPSYMHRIGRVGRDGCGGRA 474
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/102 (29%), Positives = 47/102 (46%)
Frame = -3
Query: 595 IIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGR 416
I IF + + L +LG+N + + Q+ + L+ +V T++ R
Sbjct: 379 IAIFCETVQRVTQVTMALRQLGYNFKPVCSMITKNQQLVTVNDLEFRKIHGVVCTNILAR 438
Query: 415 GIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFV 290
GID+ V I +M+ + Y HRIGR GR G GK+ V
Sbjct: 439 GIDVSSVKHTIIMEMSADFDTYKHRIGRVGRDGCGGKSTVLV 480
>U00066-10|AAA50744.2| 106|Caenorhabditis elegans Hypothetical
protein R12B2.6 protein.
Length = 106
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/27 (62%), Positives = 25/27 (92%)
Frame = -3
Query: 328 GRAGKTGKAMSFVTKEDSALFYDLKQV 248
GRAGK GKA++F+T +D+A+++DLKQV
Sbjct: 15 GRAGKHGKAITFLTPDDTAVYFDLKQV 41
>U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related
helicase protein 2 protein.
Length = 620
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Frame = -3
Query: 592 IIFVNQKKGAD----VLAKGLEKLGFNACTLHGGK-----------GQEQRDFALASLKG 458
IIFV KK AD VL L +LG + + G K ++++ L
Sbjct: 287 IIFVRTKKEADFLNYVLNDRLHELGIKSDWMSGQKKSTASSADISASKQKQMEKLKMFAD 346
Query: 457 GAKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 332
G ILV+T VA G+DI + S+VI Y+ A + R GR
Sbjct: 347 GENQILVSTSVAEEGLDIPECSLVIKYNYATNETAHVQRRGR 388
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/93 (26%), Positives = 42/93 (45%)
Frame = -3
Query: 595 IIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGR 416
I IF + + L +LG+N + + Q+ + L+ +V T++ R
Sbjct: 226 IAIFCETVQRVTQVTMTLRQLGYNFKPVCSMITKNQQLVTVNDLEFRKIHGVVCTNILAR 285
Query: 415 GIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAG 317
GID+ V I +M+ + Y HRIGR +G
Sbjct: 286 GIDVSSVKHTIIMEMSADFDTYKHRIGRVSISG 318
>Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical
protein F58A4.7c protein.
Length = 428
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 393 LTSLMSIPRPATSVATRISLAPPLRLASAKSRC--SWPLPPCSVQALKPSFSSPFARTSA 566
L +L P + S+A++ PP L S ++ PLPP SV+ PS S+P T+A
Sbjct: 279 LLTLNGSPTSSESLASQRIFHPPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAA 338
Query: 567 PFFWLTKI 590
P + T +
Sbjct: 339 PIIFSTAV 346
>Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical
protein F58A4.7b protein.
Length = 431
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 393 LTSLMSIPRPATSVATRISLAPPLRLASAKSRC--SWPLPPCSVQALKPSFSSPFARTSA 566
L +L P + S+A++ PP L S ++ PLPP SV+ PS S+P T+A
Sbjct: 281 LLTLNGSPTSSESLASQRIFHPPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAA 340
Query: 567 PFFWLTKI 590
P + T +
Sbjct: 341 PIIFSTAV 348
>Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical
protein F58A4.7a protein.
Length = 429
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 393 LTSLMSIPRPATSVATRISLAPPLRLASAKSRC--SWPLPPCSVQALKPSFSSPFARTSA 566
L +L P + S+A++ PP L S ++ PLPP SV+ PS S+P T+A
Sbjct: 279 LLTLNGSPTSSESLASQRIFHPPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAA 338
Query: 567 PFFWLTKI 590
P + T +
Sbjct: 339 PIIFSTAV 346
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = -3
Query: 442 LVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALF 266
L+AT V G+D+K ++VI +D + Y GR RAG + + V ++D+A +
Sbjct: 457 LIATSVLEEGVDVKQCNLVIKFDRPLDMRSYVQSKGRARRAG--SRYVITVEEKDTAAY 513
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 37.5 bits (83), Expect = 0.012
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Frame = -3
Query: 592 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAK--DILVATDVAG 419
+IF K DVL L G+ L G G EQR + K +++T G
Sbjct: 1208 LIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMMERFNADPKVFCFILSTRSGG 1267
Query: 418 RGIDIKDVSMVINYD------MAKTIEDYTHRIGRT 329
G+++ VI YD M +D HRIG+T
Sbjct: 1268 VGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQT 1303
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 37.5 bits (83), Expect = 0.012
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Frame = -3
Query: 592 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAK--DILVATDVAG 419
+IF K DVL L G+ L G G EQR + K +++T G
Sbjct: 1208 LIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMMERFNADPKVFCFILSTRSGG 1267
Query: 418 RGIDIKDVSMVINYD------MAKTIEDYTHRIGRT 329
G+++ VI YD M +D HRIG+T
Sbjct: 1268 VGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQT 1303
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 36.7 bits (81), Expect = 0.022
Identities = 27/76 (35%), Positives = 39/76 (51%)
Frame = -3
Query: 547 GLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDVSMVINYDMA 368
GL K ++ + K Q+Q + L G ILV+T VA G+D+ + S+VI Y+ A
Sbjct: 737 GLNKSTASSADISASK-QKQME-KLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYA 794
Query: 367 KTIEDYTHRIGRTGRA 320
+ R GR GRA
Sbjct: 795 TNEIAHVQRRGR-GRA 809
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 36.7 bits (81), Expect = 0.022
Identities = 27/76 (35%), Positives = 39/76 (51%)
Frame = -3
Query: 547 GLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDVSMVINYDMA 368
GL K ++ + K Q+Q + L G ILV+T VA G+D+ + S+VI Y+ A
Sbjct: 737 GLNKSTASSADISASK-QKQME-KLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYA 794
Query: 367 KTIEDYTHRIGRTGRA 320
+ R GR GRA
Sbjct: 795 TNEIAHVQRRGR-GRA 809
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical protein
D2005.5 protein.
Length = 1119
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = -3
Query: 637 RKLTEILQRGVEPPIIIFVNQKKGADVLAK-GLEKLGFNACTLHGGKGQE---QRDFALA 470
R + + QR + F+N+ K D G + +G+ T G Q+ ++ L
Sbjct: 762 RVIIFVTQRSTAQRVSDFLNESKVLDQFGNYGEQMVGYVLGTNKQGAVQQTSQEQQLTLD 821
Query: 469 SLKGGAKDILVATDVAGRGIDIKDVSMVINYD 374
G ++VAT V G+D+ +++I Y+
Sbjct: 822 KFNNGRLKVIVATSVVEEGLDVTACNLIIKYN 853
>Z66513-3|CAA91331.1| 186|Caenorhabditis elegans Hypothetical
protein F54D5.4 protein.
Length = 186
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +2
Query: 533 KFFKSLCKNICTFFLVNKNNNGWFDTTLQNLCKFSTFFILAYHVDYLFSS 682
K +S CKNI ++N N GW T +Q F+ F I Y D F S
Sbjct: 121 KTTRSNCKNIVNTLVLNLNRPGWAITCIQ----FNEFAIDDYTPDMNFCS 166
>AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical
protein T11F1.8 protein.
Length = 888
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 500 FTTMQRTGIETKFFKSLCKNICTFFLVNKNNN 595
F + T KFF CK +C ++N N+N
Sbjct: 36 FNHSELTSETIKFFPKKCKAVCGILVINSNSN 67
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 500 FTTMQRTGIETKFFKSLCKNICTFFLVNKNNN 595
F + T FF C+ +C F ++N N+N
Sbjct: 475 FNHFELTSETIDFFPKKCETVCGFLMINSNSN 506
>Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical
protein T27F2.1 protein.
Length = 535
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 411 IPRPATSVATRISLAPPLRLASAKSRCSWPLPPC 512
IPR S + +PP ++ +AK + W +PPC
Sbjct: 221 IPRAPPSPPAPVMHSPPRKM-TAKDQNDWKIPPC 253
>Z66513-2|CAA91330.2| 186|Caenorhabditis elegans Hypothetical
protein F54D5.3 protein.
Length = 186
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 533 KFFKSLCKNICTFFLVNKNNNGWFDTTLQ 619
K K+ CKNI ++N N GW T +Q
Sbjct: 121 KSTKNTCKNIVNTLVLNLNRPGWAITCIQ 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,600,431
Number of Sequences: 27780
Number of extensions: 423494
Number of successful extensions: 1373
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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