Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15f04
(797 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113454-1|AAM29459.1| 297|Drosophila melanogaster RE35715p pro... 305 3e-83
AE014297-4433|AAN14186.1| 297|Drosophila melanogaster CG7610-PC... 305 3e-83
AE014297-4432|AAF56932.1| 297|Drosophila melanogaster CG7610-PB... 305 3e-83
AE014297-4431|AAN14185.1| 297|Drosophila melanogaster CG7610-PA... 305 3e-83
Y12701-1|CAA73233.1| 169|Drosophila melanogaster ATP synthase, ... 109 4e-24
AY051973-1|AAK93397.1| 316|Drosophila melanogaster LD43650p pro... 30 4.2
AF176011-1|AAD52649.1| 316|Drosophila melanogaster mitochondria... 30 4.2
AE014296-29|AAN11421.1| 316|Drosophila melanogaster CG6851-PC, ... 30 4.2
AE014296-28|AAN11420.1| 316|Drosophila melanogaster CG6851-PB, ... 30 4.2
AE014296-27|AAF47342.1| 316|Drosophila melanogaster CG6851-PA, ... 30 4.2
>AY113454-1|AAM29459.1| 297|Drosophila melanogaster RE35715p
protein.
Length = 297
Score = 305 bits (750), Expect = 3e-83
Identities = 146/198 (73%), Positives = 172/198 (86%)
Frame = -1
Query: 797 SDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGILQRLYGKHIISVANEIGRL 618
SDRGLCGAVHTGV+++IR L++ A N KV CVGDKSR IL RLYGK+I+ VANE+GRL
Sbjct: 100 SDRGLCGAVHTGVARLIRGELAQDEA-NTKVFCVGDKSRAILSRLYGKNILMVANEVGRL 158
Query: 617 PPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKLTAYD 438
PPTFLDAS++A +L +GY++ GKI+YN+FKSVVSY S LP+++ ++E + KL YD
Sbjct: 159 PPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVSYQCSTLPIFSGSTVEKSEKLAVYD 218
Query: 437 SLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTR 258
SLDSDV++SY EFSLASL+FY +KEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTR
Sbjct: 219 SLDSDVVKSYLEFSLASLIFYTMKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTR 278
Query: 257 QAVITRELIEIISGAAAL 204
QAVITRELIEIISGAAAL
Sbjct: 279 QAVITRELIEIISGAAAL 296
>AE014297-4433|AAN14186.1| 297|Drosophila melanogaster CG7610-PC,
isoform C protein.
Length = 297
Score = 305 bits (750), Expect = 3e-83
Identities = 146/198 (73%), Positives = 172/198 (86%)
Frame = -1
Query: 797 SDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGILQRLYGKHIISVANEIGRL 618
SDRGLCGAVHTGV+++IR L++ A N KV CVGDKSR IL RLYGK+I+ VANE+GRL
Sbjct: 100 SDRGLCGAVHTGVARLIRGELAQDEA-NTKVFCVGDKSRAILSRLYGKNILMVANEVGRL 158
Query: 617 PPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKLTAYD 438
PPTFLDAS++A +L +GY++ GKI+YN+FKSVVSY S LP+++ ++E + KL YD
Sbjct: 159 PPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVSYQCSTLPIFSGSTVEKSEKLAVYD 218
Query: 437 SLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTR 258
SLDSDV++SY EFSLASL+FY +KEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTR
Sbjct: 219 SLDSDVVKSYLEFSLASLIFYTMKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTR 278
Query: 257 QAVITRELIEIISGAAAL 204
QAVITRELIEIISGAAAL
Sbjct: 279 QAVITRELIEIISGAAAL 296
>AE014297-4432|AAF56932.1| 297|Drosophila melanogaster CG7610-PB,
isoform B protein.
Length = 297
Score = 305 bits (750), Expect = 3e-83
Identities = 146/198 (73%), Positives = 172/198 (86%)
Frame = -1
Query: 797 SDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGILQRLYGKHIISVANEIGRL 618
SDRGLCGAVHTGV+++IR L++ A N KV CVGDKSR IL RLYGK+I+ VANE+GRL
Sbjct: 100 SDRGLCGAVHTGVARLIRGELAQDEA-NTKVFCVGDKSRAILSRLYGKNILMVANEVGRL 158
Query: 617 PPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKLTAYD 438
PPTFLDAS++A +L +GY++ GKI+YN+FKSVVSY S LP+++ ++E + KL YD
Sbjct: 159 PPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVSYQCSTLPIFSGSTVEKSEKLAVYD 218
Query: 437 SLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTR 258
SLDSDV++SY EFSLASL+FY +KEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTR
Sbjct: 219 SLDSDVVKSYLEFSLASLIFYTMKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTR 278
Query: 257 QAVITRELIEIISGAAAL 204
QAVITRELIEIISGAAAL
Sbjct: 279 QAVITRELIEIISGAAAL 296
>AE014297-4431|AAN14185.1| 297|Drosophila melanogaster CG7610-PA,
isoform A protein.
Length = 297
Score = 305 bits (750), Expect = 3e-83
Identities = 146/198 (73%), Positives = 172/198 (86%)
Frame = -1
Query: 797 SDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGILQRLYGKHIISVANEIGRL 618
SDRGLCGAVHTGV+++IR L++ A N KV CVGDKSR IL RLYGK+I+ VANE+GRL
Sbjct: 100 SDRGLCGAVHTGVARLIRGELAQDEA-NTKVFCVGDKSRAILSRLYGKNILMVANEVGRL 158
Query: 617 PPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKLTAYD 438
PPTFLDAS++A +L +GY++ GKI+YN+FKSVVSY S LP+++ ++E + KL YD
Sbjct: 159 PPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVSYQCSTLPIFSGSTVEKSEKLAVYD 218
Query: 437 SLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTR 258
SLDSDV++SY EFSLASL+FY +KEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTR
Sbjct: 219 SLDSDVVKSYLEFSLASLIFYTMKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTR 278
Query: 257 QAVITRELIEIISGAAAL 204
QAVITRELIEIISGAAAL
Sbjct: 279 QAVITRELIEIISGAAAL 296
>Y12701-1|CAA73233.1| 169|Drosophila melanogaster ATP synthase,
gamma subunit protein.
Length = 169
Score = 109 bits (262), Expect = 4e-24
Identities = 51/71 (71%), Positives = 61/71 (85%)
Frame = -1
Query: 797 SDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGILQRLYGKHIISVANEIGRL 618
SDRGLCGAVHTGV+++IR L++ A N KV CVGDKSR IL RLYGK+I+ VANE+GRL
Sbjct: 100 SDRGLCGAVHTGVARLIRGELAQDEA-NTKVFCVGDKSRAILSRLYGKNILMVANEVGRL 158
Query: 617 PPTFLDASQLA 585
PPTFLDAS++A
Sbjct: 159 PPTFLDASKIA 169
>AY051973-1|AAK93397.1| 316|Drosophila melanogaster LD43650p
protein.
Length = 316
Score = 29.9 bits (64), Expect = 4.2
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = -1
Query: 653 HIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLP--LYT 480
H+IS+ R+ F+ L T+I+ S E + I F +V DL + +
Sbjct: 153 HVISL-----RMMAQFVGRETLYTSIVGSVAEIWKSEGIAGFFAGLVPKLLGDLACLVLS 207
Query: 479 KKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQS-SRMTA 327
+I +K D L +T+F+++SLL+ CS S SR+ A
Sbjct: 208 SSTIYILNKYIIKDKLGRQYNSGFTQFAVSSLLYPLQVVSTCSAVSGSRLMA 259
>AF176011-1|AAD52649.1| 316|Drosophila melanogaster mitochondrial
carrier homolog protein.
Length = 316
Score = 29.9 bits (64), Expect = 4.2
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = -1
Query: 653 HIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLP--LYT 480
H+IS+ R+ F+ L T+I+ S E + I F +V DL + +
Sbjct: 153 HVISL-----RMMAQFVGRETLYTSIVGSVAEIWKSEGIAGFFAGLVPKLLGDLACLVLS 207
Query: 479 KKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQS-SRMTA 327
+I +K D L +T+F+++SLL+ CS S SR+ A
Sbjct: 208 SSTIYILNKYIIKDKLGRQYNSGFTQFAVSSLLYPLQVVSTCSAVSGSRLMA 259
>AE014296-29|AAN11421.1| 316|Drosophila melanogaster CG6851-PC,
isoform C protein.
Length = 316
Score = 29.9 bits (64), Expect = 4.2
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = -1
Query: 653 HIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLP--LYT 480
H+IS+ R+ F+ L T+I+ S E + I F +V DL + +
Sbjct: 153 HVISL-----RMMAQFVGRETLYTSIVGSVAEIWKSEGIAGFFAGLVPKLLGDLACLVLS 207
Query: 479 KKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQS-SRMTA 327
+I +K D L +T+F+++SLL+ CS S SR+ A
Sbjct: 208 SSTIYILNKYIIKDKLGRQYNSGFTQFAVSSLLYPLQVVSTCSAVSGSRLMA 259
>AE014296-28|AAN11420.1| 316|Drosophila melanogaster CG6851-PB,
isoform B protein.
Length = 316
Score = 29.9 bits (64), Expect = 4.2
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = -1
Query: 653 HIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLP--LYT 480
H+IS+ R+ F+ L T+I+ S E + I F +V DL + +
Sbjct: 153 HVISL-----RMMAQFVGRETLYTSIVGSVAEIWKSEGIAGFFAGLVPKLLGDLACLVLS 207
Query: 479 KKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQS-SRMTA 327
+I +K D L +T+F+++SLL+ CS S SR+ A
Sbjct: 208 SSTIYILNKYIIKDKLGRQYNSGFTQFAVSSLLYPLQVVSTCSAVSGSRLMA 259
>AE014296-27|AAF47342.1| 316|Drosophila melanogaster CG6851-PA,
isoform A protein.
Length = 316
Score = 29.9 bits (64), Expect = 4.2
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = -1
Query: 653 HIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLP--LYT 480
H+IS+ R+ F+ L T+I+ S E + I F +V DL + +
Sbjct: 153 HVISL-----RMMAQFVGRETLYTSIVGSVAEIWKSEGIAGFFAGLVPKLLGDLACLVLS 207
Query: 479 KKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQS-SRMTA 327
+I +K D L +T+F+++SLL+ CS S SR+ A
Sbjct: 208 SSTIYILNKYIIKDKLGRQYNSGFTQFAVSSLLYPLQVVSTCSAVSGSRLMA 259
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,099,142
Number of Sequences: 53049
Number of extensions: 598275
Number of successful extensions: 1709
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1704
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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