Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt15e22
         (344 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X04813-1|CAA28502.1| 2236|Drosophila melanogaster protein ( Dros...    28   2.8  
Y14157-1|CAA74574.1| 2176|Drosophila melanogaster Toucan protein...    28   3.7  
AF145652-1|AAD38627.1|  499|Drosophila melanogaster BcDNA.GH0878...    28   3.7  
AE014297-1133|AAF54518.1| 1436|Drosophila melanogaster CG11872-P...    28   3.7  
AE014134-1003|AAN10564.1|  222|Drosophila melanogaster CG18340-P...    28   3.7  
AE014134-553|AAF51145.2| 2162|Drosophila melanogaster CG9660-PA,...    28   3.7  
AE013599-801|AAF58981.2|  499|Drosophila melanogaster CG18659-PB...    28   3.7  
AE013599-800|AAM68810.2|  908|Drosophila melanogaster CG18659-PA...    28   3.7  
BT025042-1|ABE73213.1| 2313|Drosophila melanogaster LD27386p pro...    27   5.0  
AY050232-1|AAK84931.1| 1443|Drosophila melanogaster SD01656p pro...    27   5.0  
AL138972-11|CAB72294.1| 1212|Drosophila melanogaster EG:BACR25B3...    27   5.0  
AF132186-1|AAD34774.1| 1212|Drosophila melanogaster unknown prot...    27   5.0  
AE014298-1909|AAF48273.2| 2362|Drosophila melanogaster CG1716-PA...    27   5.0  
AE014298-417|AAF45793.1| 1212|Drosophila melanogaster CG8590-PA ...    27   5.0  
AY047503-1|AAK77235.1|  615|Drosophila melanogaster GH01279p pro...    27   6.5  
AE014296-901|AAF47941.2|  615|Drosophila melanogaster CG7509-PA ...    27   6.5  
BT030426-1|ABO52846.1|  703|Drosophila melanogaster IP17795p pro...    27   8.7  
BT025047-1|ABE73218.1|  775|Drosophila melanogaster IP16401p pro...    27   8.7  
BT009954-1|AAQ22423.1|  706|Drosophila melanogaster RH48555p pro...    27   8.7  
BT001322-1|AAN71077.1|  701|Drosophila melanogaster AT16369p pro...    27   8.7  
AY051577-1|AAK93001.1|  716|Drosophila melanogaster GH22838p pro...    27   8.7  
AE013599-1565|AAM68648.2|  671|Drosophila melanogaster CG8772-PF...    27   8.7  
AE013599-1564|AAM68647.1|  737|Drosophila melanogaster CG8772-PB...    27   8.7  
AE013599-1563|AAM68646.1|  658|Drosophila melanogaster CG8772-PC...    27   8.7  
AE013599-1562|AAM68645.1|  648|Drosophila melanogaster CG8772-PE...    27   8.7  
AE013599-1561|AAM68644.1|  716|Drosophila melanogaster CG8772-PD...    27   8.7  
AE013599-1560|AAM68643.1|  706|Drosophila melanogaster CG8772-PA...    27   8.7  
AE013599-1072|AAF58808.1| 1698|Drosophila melanogaster CG12904-P...    27   8.7  

>X04813-1|CAA28502.1| 2236|Drosophila melanogaster protein (
           Drosophila melanogasterrudimentary gene. ).
          Length = 2236

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +1

Query: 148 VGQAWKGWPPLSQISQSWAPMIGALPSVHRVGLWHRENFVPGRWNSAATLVGSPSVCLSS 327
           V ++ KGW  +         ++ A+P+  R+ + + ENF P   ++  ++V +PS  LS 
Sbjct: 604 VDKSLKGWKEVEY------EVVRAMPTTTRITVCNMENFDPLGIHTGESIVVAPSQTLSD 657

Query: 328 R-AKVL 342
           R  KVL
Sbjct: 658 REIKVL 663


>Y14157-1|CAA74574.1| 2176|Drosophila melanogaster Toucan protein
           protein.
          Length = 2176

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 5/58 (8%)
 Frame = -2

Query: 256 LDATVQPDGQKAEPQSSG-----PNFVKFATKVANLSKLGPPKPTPTTSEAPKDKMDF 98
           LD   Q DG+ + P S G     P+      +V+      PP P P   + P    DF
Sbjct: 757 LDTGYQGDGEMSRPASRGACDHSPSNGPHLGRVSRQPSFPPPNPAPLRRQDPMTDSDF 814


>AF145652-1|AAD38627.1|  499|Drosophila melanogaster BcDNA.GH08789
           protein.
          Length = 499

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 223 AEPQSSGPNFVKFATKVANLSKLGPPKPTPTTSEAPKDKMD 101
           A   SSG +FV  A+  ++L+   PP PTP      +  ++
Sbjct: 318 ATSSSSGASFVTAASTFSHLNVSDPPIPTPRAKREQQQPLE 358


>AE014297-1133|AAF54518.1| 1436|Drosophila melanogaster CG11872-PA
           protein.
          Length = 1436

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 208 SGPNFVKFATKVANLSKLGPPKP-TPTT 128
           S P  +K   KV+  SKL PP P TPTT
Sbjct: 633 SRPTTIKKIIKVSKKSKLMPPTPVTPTT 660


>AE014134-1003|AAN10564.1|  222|Drosophila melanogaster CG18340-PB,
           isoform B protein.
          Length = 222

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = +1

Query: 208 MIGALPSVHR----VGLWHRENFVPGRWNSAATLVGSP 309
           ++ AL S++R    VGLW  +  VP  W SA   +G P
Sbjct: 187 VLQALTSIYRTGGVVGLW--KGTVPNTWRSALVTIGEP 222


>AE014134-553|AAF51145.2| 2162|Drosophila melanogaster CG9660-PA,
           isoform A protein.
          Length = 2162

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 5/58 (8%)
 Frame = -2

Query: 256 LDATVQPDGQKAEPQSSG-----PNFVKFATKVANLSKLGPPKPTPTTSEAPKDKMDF 98
           LD   Q DG+ + P S G     P+      +V+      PP P P   + P    DF
Sbjct: 757 LDTGYQGDGEMSRPASRGACDHSPSNGPHLGRVSRQPSFPPPNPAPLRRQDPMTDSDF 814


>AE013599-801|AAF58981.2|  499|Drosophila melanogaster CG18659-PB,
           isoform B protein.
          Length = 499

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 223 AEPQSSGPNFVKFATKVANLSKLGPPKPTPTTSEAPKDKMD 101
           A   SSG +FV  A+  ++L+   PP PTP      +  ++
Sbjct: 318 ATSSSSGASFVTAASTFSHLNVSDPPIPTPRAKREQQQPLE 358


>AE013599-800|AAM68810.2|  908|Drosophila melanogaster CG18659-PA,
           isoform A protein.
          Length = 908

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 223 AEPQSSGPNFVKFATKVANLSKLGPPKPTPTTSEAPKDKMD 101
           A   SSG +FV  A+  ++L+   PP PTP      +  ++
Sbjct: 727 ATSSSSGASFVTAASTFSHLNVSDPPIPTPRAKREQQQPLE 767


>BT025042-1|ABE73213.1| 2313|Drosophila melanogaster LD27386p protein.
          Length = 2313

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 256  LDATVQPDGQKAEPQSSGPNFVKFATKVANL-SKLGPPKPTPTTSEAPKD 110
            +D   + +GQ    + + P   +FA +VAN+ +    P P+PT S  P+D
Sbjct: 1167 VDEDQRKEGQDEVKREADPEEDEFAQRVANMETPATTPTPSPTQSN-PED 1215


>AY050232-1|AAK84931.1| 1443|Drosophila melanogaster SD01656p
           protein.
          Length = 1443

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 256 LDATVQPDGQKAEPQSSGPNFVKFATKVANL-SKLGPPKPTPTTSEAPKD 110
           +D   + +GQ    + + P   +FA +VAN+ +    P P+PT S  P+D
Sbjct: 297 VDEDQRKEGQDEVKREADPEEDEFAQRVANMETPATTPTPSPTQSN-PED 345


>AL138972-11|CAB72294.1| 1212|Drosophila melanogaster EG:BACR25B3.9
            protein.
          Length = 1212

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -2

Query: 253  DATVQPDGQKAEPQSSGPNFVKFATKVANLSKLGPPKPT 137
            DA    D    EPQ+S  N VKF T  A    +  PK T
Sbjct: 1133 DADKSDDDGDDEPQTSKENAVKFVTPEAPGKVVASPKQT 1171


>AF132186-1|AAD34774.1| 1212|Drosophila melanogaster unknown protein.
          Length = 1212

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -2

Query: 253  DATVQPDGQKAEPQSSGPNFVKFATKVANLSKLGPPKPT 137
            DA    D    EPQ+S  N VKF T  A    +  PK T
Sbjct: 1133 DADKSDDDGDDEPQTSKENAVKFVTPEAPGKVVASPKQT 1171


>AE014298-1909|AAF48273.2| 2362|Drosophila melanogaster CG1716-PA
            protein.
          Length = 2362

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 256  LDATVQPDGQKAEPQSSGPNFVKFATKVANL-SKLGPPKPTPTTSEAPKD 110
            +D   + +GQ    + + P   +FA +VAN+ +    P P+PT S  P+D
Sbjct: 1216 VDEDQRKEGQDEVKREADPEEDEFAQRVANMETPATTPTPSPTQSN-PED 1264


>AE014298-417|AAF45793.1| 1212|Drosophila melanogaster CG8590-PA
            protein.
          Length = 1212

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -2

Query: 253  DATVQPDGQKAEPQSSGPNFVKFATKVANLSKLGPPKPT 137
            DA    D    EPQ+S  N VKF T  A    +  PK T
Sbjct: 1133 DADKSDDDGDDEPQTSKENAVKFVTPEAPGKVVASPKQT 1171


>AY047503-1|AAK77235.1|  615|Drosophila melanogaster GH01279p
           protein.
          Length = 615

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
 Frame = +1

Query: 85  IKFSKSPF---CLSAPLTLWVWVWVGQAWKGWPPLSQISQSWAPMIGALPSVHRVGLWHR 255
           +K  K+P+   C +  L  W+  +V + W G  P+ +      P  G L   H VGL   
Sbjct: 498 VKLDKNPWHCDCRALYLARWIREFVLKLWDGQQPMCR-----GP--GDLGG-HEVGLLRY 549

Query: 256 ENFVPGRWNSAATL 297
           ++   G+W S  +L
Sbjct: 550 DDLCDGQWASMLSL 563


>AE014296-901|AAF47941.2|  615|Drosophila melanogaster CG7509-PA
           protein.
          Length = 615

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
 Frame = +1

Query: 85  IKFSKSPF---CLSAPLTLWVWVWVGQAWKGWPPLSQISQSWAPMIGALPSVHRVGLWHR 255
           +K  K+P+   C +  L  W+  +V + W G  P+ +      P  G L   H VGL   
Sbjct: 498 VKLDKNPWHCDCRALYLARWIREFVLKLWDGQQPMCR-----GP--GDLGG-HEVGLLRY 549

Query: 256 ENFVPGRWNSAATL 297
           ++   G+W S  +L
Sbjct: 550 DDLCDGQWASMLSL 563


>BT030426-1|ABO52846.1|  703|Drosophila melanogaster IP17795p
           protein.
          Length = 703

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 156 SLERLATFVANFTKLGPDDWGSAFC 230
           +L +LA ++    +  PD WG + C
Sbjct: 218 TLGKLADYIPQLARYNPDSWGLSIC 242


>BT025047-1|ABE73218.1|  775|Drosophila melanogaster IP16401p
           protein.
          Length = 775

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 156 SLERLATFVANFTKLGPDDWGSAFC 230
           +L +LA ++    +  PD WG + C
Sbjct: 221 TLGKLADYIPQLARYNPDSWGLSIC 245


>BT009954-1|AAQ22423.1|  706|Drosophila melanogaster RH48555p
           protein.
          Length = 706

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 156 SLERLATFVANFTKLGPDDWGSAFC 230
           +L +LA ++    +  PD WG + C
Sbjct: 221 TLGKLADYIPQLARYNPDSWGLSIC 245


>BT001322-1|AAN71077.1|  701|Drosophila melanogaster AT16369p
           protein.
          Length = 701

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 156 SLERLATFVANFTKLGPDDWGSAFC 230
           +L +LA ++    +  PD WG + C
Sbjct: 163 TLGKLADYIPQLARYNPDSWGLSIC 187


>AY051577-1|AAK93001.1|  716|Drosophila melanogaster GH22838p
           protein.
          Length = 716

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 156 SLERLATFVANFTKLGPDDWGSAFC 230
           +L +LA ++    +  PD WG + C
Sbjct: 231 TLGKLADYIPQLARYNPDSWGLSIC 255


>AE013599-1565|AAM68648.2|  671|Drosophila melanogaster CG8772-PF,
           isoform F protein.
          Length = 671

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 156 SLERLATFVANFTKLGPDDWGSAFC 230
           +L +LA ++    +  PD WG + C
Sbjct: 186 TLGKLADYIPQLARYNPDSWGLSIC 210


>AE013599-1564|AAM68647.1|  737|Drosophila melanogaster CG8772-PB,
           isoform B protein.
          Length = 737

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 156 SLERLATFVANFTKLGPDDWGSAFC 230
           +L +LA ++    +  PD WG + C
Sbjct: 252 TLGKLADYIPQLARYNPDSWGLSIC 276


>AE013599-1563|AAM68646.1|  658|Drosophila melanogaster CG8772-PC,
           isoform C protein.
          Length = 658

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 156 SLERLATFVANFTKLGPDDWGSAFC 230
           +L +LA ++    +  PD WG + C
Sbjct: 173 TLGKLADYIPQLARYNPDSWGLSIC 197


>AE013599-1562|AAM68645.1|  648|Drosophila melanogaster CG8772-PE,
           isoform E protein.
          Length = 648

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 156 SLERLATFVANFTKLGPDDWGSAFC 230
           +L +LA ++    +  PD WG + C
Sbjct: 163 TLGKLADYIPQLARYNPDSWGLSIC 187


>AE013599-1561|AAM68644.1|  716|Drosophila melanogaster CG8772-PD,
           isoform D protein.
          Length = 716

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 156 SLERLATFVANFTKLGPDDWGSAFC 230
           +L +LA ++    +  PD WG + C
Sbjct: 231 TLGKLADYIPQLARYNPDSWGLSIC 255


>AE013599-1560|AAM68643.1|  706|Drosophila melanogaster CG8772-PA,
           isoform A protein.
          Length = 706

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 156 SLERLATFVANFTKLGPDDWGSAFC 230
           +L +LA ++    +  PD WG + C
Sbjct: 221 TLGKLADYIPQLARYNPDSWGLSIC 245


>AE013599-1072|AAF58808.1| 1698|Drosophila melanogaster CG12904-PA
           protein.
          Length = 1698

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 99  KSILSFGASDVVGVGLGGPSLERLA 173
           +S+   G    +GVGLGG +L RLA
Sbjct: 880 RSVPGMGMGMAMGVGLGGGTLARLA 904


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,913,749
Number of Sequences: 53049
Number of extensions: 395436
Number of successful extensions: 1477
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1477
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)