Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt15e18
         (343 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1885|AAM71003.1|  238|Drosophila melanogaster CG30073-P...    28   2.8  
AE014134-2428|AAF53354.1|  611|Drosophila melanogaster CG16869-P...    27   8.4  

>AE013599-1885|AAM71003.1|  238|Drosophila melanogaster CG30073-PA
           protein.
          Length = 238

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 133 KILSCCGKDVIQVYLRVLKDLVHFWDNY 50
           K++ CCGK  +  +  V  +   FWD+Y
Sbjct: 38  KLVYCCGKSFLDKFPFVGSNCTPFWDDY 65


>AE014134-2428|AAF53354.1|  611|Drosophila melanogaster CG16869-PA
           protein.
          Length = 611

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 101 YYILPATRQYFCKPHHEAQLSSPFTSEFVIYYYQYYSI 214
           YY LP T   +C  + E +  + F ++  + YY+  SI
Sbjct: 347 YYALPRTNFTYCPLNDEERFFNMFEAQSDLQYYRAASI 384


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,726,457
Number of Sequences: 53049
Number of extensions: 332788
Number of successful extensions: 815
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)