Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15e02
(870 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071643-1|AAL49265.1| 327|Drosophila melanogaster RE69232p pro... 106 5e-23
AE014296-931|AAF50802.1| 327|Drosophila melanogaster CG4623-PA ... 106 5e-23
X62948-1|CAA44720.1| 267|Drosophila melanogaster Cyclin C protein. 33 0.51
AY061425-1|AAL28973.1| 267|Drosophila melanogaster LD35705p pro... 33 0.51
AE014297-1914|AAF55109.1| 267|Drosophila melanogaster CG7281-PA... 33 0.51
AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p pro... 31 1.6
AY129439-1|AAM76181.1| 751|Drosophila melanogaster LD08185p pro... 31 1.6
AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-P... 31 1.6
AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-P... 31 1.6
BT004891-1|AAO47869.1| 635|Drosophila melanogaster RE57156p pro... 30 3.6
AY089490-1|AAL90228.1| 739|Drosophila melanogaster GH03557p pro... 30 3.6
AY069865-1|AAL40010.1| 533|Drosophila melanogaster SD10607p pro... 30 3.6
AF034421-1|AAB87984.1| 634|Drosophila melanogaster Vimar protein. 30 3.6
AE014298-388|AAF45774.1| 739|Drosophila melanogaster CG2845-PA,... 30 3.6
AE013599-268|AAS64794.1| 635|Drosophila melanogaster CG3572-PC,... 30 3.6
AE013599-267|AAF57418.1| 634|Drosophila melanogaster CG3572-PB,... 30 3.6
AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-P... 30 4.8
AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-P... 30 4.8
AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-P... 30 4.8
>AY071643-1|AAL49265.1| 327|Drosophila melanogaster RE69232p
protein.
Length = 327
Score = 106 bits (254), Expect = 5e-23
Identities = 54/119 (45%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Frame = -3
Query: 823 LRKLADENPKAKHILLYKAEIQDRKHELLSNEEEYLKILNIVDQVLNQIEEQLKLQ-PVG 647
LR DE K L +K +IQ R+HEL S+ EE+ K+L+ V L +E++L Q P
Sbjct: 173 LRHSVDEQATKKAALQHKLDIQLRRHELASSREEFQKVLDAVRHFLLYVEQELTAQAPRV 232
Query: 646 NWLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFKNTIPN 470
WL + S+ADI+L +LL RL++LG E +FW+ GK P +E+YF R RQRESF P+
Sbjct: 233 EWLTGDELSVADISLGLLLHRLYQLGFENQFWTFGKLPQVEAYFLRFRQRESFHRLQPS 291
>AE014296-931|AAF50802.1| 327|Drosophila melanogaster CG4623-PA
protein.
Length = 327
Score = 106 bits (254), Expect = 5e-23
Identities = 54/119 (45%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Frame = -3
Query: 823 LRKLADENPKAKHILLYKAEIQDRKHELLSNEEEYLKILNIVDQVLNQIEEQLKLQ-PVG 647
LR DE K L +K +IQ R+HEL S+ EE+ K+L+ V L +E++L Q P
Sbjct: 173 LRHSVDEQATKKAALQHKLDIQLRRHELASSREEFQKVLDAVRHFLLYVEQELTAQAPRV 232
Query: 646 NWLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFKNTIPN 470
WL + S+ADI+L +LL RL++LG E +FW+ GK P +E+YF R RQRESF P+
Sbjct: 233 EWLTGDELSVADISLGLLLHRLYQLGFENQFWTFGKLPQVEAYFLRFRQRESFHRLQPS 291
>X62948-1|CAA44720.1| 267|Drosophila melanogaster Cyclin C protein.
Length = 267
Score = 33.1 bits (72), Expect = 0.51
Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -3
Query: 763 IQDRKHELLS-NEEEYLKILNIVDQVLNQIEEQLKLQ 656
+++R+H+LL+ NE+EY K+ V+ + EQLKL+
Sbjct: 22 LRERQHDLLALNEDEYQKVFIFFANVIQVLGEQLKLR 58
>AY061425-1|AAL28973.1| 267|Drosophila melanogaster LD35705p
protein.
Length = 267
Score = 33.1 bits (72), Expect = 0.51
Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -3
Query: 763 IQDRKHELLS-NEEEYLKILNIVDQVLNQIEEQLKLQ 656
+++R+H+LL+ NE+EY K+ V+ + EQLKL+
Sbjct: 22 LRERQHDLLALNEDEYQKVFIFFANVIQVLGEQLKLR 58
>AE014297-1914|AAF55109.1| 267|Drosophila melanogaster CG7281-PA
protein.
Length = 267
Score = 33.1 bits (72), Expect = 0.51
Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -3
Query: 763 IQDRKHELLS-NEEEYLKILNIVDQVLNQIEEQLKLQ 656
+++R+H+LL+ NE+EY K+ V+ + EQLKL+
Sbjct: 22 LRERQHDLLALNEDEYQKVFIFFANVIQVLGEQLKLR 58
>AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p
protein.
Length = 1124
Score = 31.5 bits (68), Expect = 1.6
Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = -3
Query: 868 VREILKTGDLSSSQNLRKLADENPKAK-HILLYKAEIQDRKHELLSNEEEYLKILNIVDQ 692
+ ++LK + + L ++ ++ ++K H A++Q E++ N E+ K N V
Sbjct: 560 IEKMLKAFEAEKALLLTQIEQQSVESKSHSEAQNAQLQ----EIMDNLEQKDKEFNEVKL 615
Query: 691 VLNQIEEQLKLQPVGNWLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFE 512
L+ E Q+ L+ + N + +VLL ++ +LG+E + S + ++
Sbjct: 616 QLSSAESQISLKALE---IQNNLKAFEAEKSVLLTKIEQLGIEHKNNSEAQNAQLQLTLN 672
Query: 511 RVRQRES 491
+ Q ES
Sbjct: 673 NLEQNES 679
>AY129439-1|AAM76181.1| 751|Drosophila melanogaster LD08185p
protein.
Length = 751
Score = 31.5 bits (68), Expect = 1.6
Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = -3
Query: 868 VREILKTGDLSSSQNLRKLADENPKAK-HILLYKAEIQDRKHELLSNEEEYLKILNIVDQ 692
+ ++LK + + L ++ ++ ++K H A++Q E++ N E+ K N V
Sbjct: 187 IEKMLKAFEAEKALLLTQIEQQSVESKSHSEAQNAQLQ----EIMDNLEQKDKEFNEVKL 242
Query: 691 VLNQIEEQLKLQPVGNWLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFE 512
L+ E Q+ L+ + N + +VLL ++ +LG+E + S + ++
Sbjct: 243 QLSSAESQISLKALE---IQNNLKAFEAEKSVLLTKIEQLGIEHKNNSEAQNAQLQLTLN 299
Query: 511 RVRQRES 491
+ Q ES
Sbjct: 300 NLEQNES 306
>AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-PB,
isoform B protein.
Length = 1087
Score = 31.5 bits (68), Expect = 1.6
Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = -3
Query: 868 VREILKTGDLSSSQNLRKLADENPKAK-HILLYKAEIQDRKHELLSNEEEYLKILNIVDQ 692
+ ++LK + + L ++ ++ ++K H A++Q E++ N E+ K N V
Sbjct: 523 IEKMLKAFEAEKALLLTQIEQQSVESKSHSEAQNAQLQ----EIMDNLEQKDKEFNEVKL 578
Query: 691 VLNQIEEQLKLQPVGNWLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFE 512
L+ E Q+ L+ + N + +VLL ++ +LG+E + S + ++
Sbjct: 579 QLSSAESQISLKALE---IQNNLKAFEAEKSVLLTKIEQLGIEHKNNSEAQNAQLQLTLN 635
Query: 511 RVRQRES 491
+ Q ES
Sbjct: 636 NLEQNES 642
>AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-PA,
isoform A protein.
Length = 1124
Score = 31.5 bits (68), Expect = 1.6
Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = -3
Query: 868 VREILKTGDLSSSQNLRKLADENPKAK-HILLYKAEIQDRKHELLSNEEEYLKILNIVDQ 692
+ ++LK + + L ++ ++ ++K H A++Q E++ N E+ K N V
Sbjct: 560 IEKMLKAFEAEKALLLTQIEQQSVESKSHSEAQNAQLQ----EIMDNLEQKDKEFNEVKL 615
Query: 691 VLNQIEEQLKLQPVGNWLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFE 512
L+ E Q+ L+ + N + +VLL ++ +LG+E + S + ++
Sbjct: 616 QLSSAESQISLKALE---IQNNLKAFEAEKSVLLTKIEQLGIEHKNNSEAQNAQLQLTLN 672
Query: 511 RVRQRES 491
+ Q ES
Sbjct: 673 NLEQNES 679
>BT004891-1|AAO47869.1| 635|Drosophila melanogaster RE57156p
protein.
Length = 635
Score = 30.3 bits (65), Expect = 3.6
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 625 NFRSITNYRQVVILTAPLFGSELGQQCLEFLNIPLHYSEVRVFDLESQLCTTGYVLL 795
NF S N + IL A +L + CLE L+ EV++ + LC T Y LL
Sbjct: 221 NFDSSLNIQLSRILAAST-NPDLAEMCLELLHYQAESDEVKLILAKDGLCETIYNLL 276
>AY089490-1|AAL90228.1| 739|Drosophila melanogaster GH03557p
protein.
Length = 739
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = -3
Query: 805 ENPKAKHILLYKAEIQDRKHELLSNEEEYLKILNIVDQVL-NQIEEQLKLQP 653
+ P A +++ Y+ E+ + HEL + E+E ++ LN DQ + + E+ K QP
Sbjct: 46 QEPPAMYLIEYQ-ELTSKLHELEAKEQELMERLNSQDQQEDSSLVERFKEQP 96
>AY069865-1|AAL40010.1| 533|Drosophila melanogaster SD10607p
protein.
Length = 533
Score = 30.3 bits (65), Expect = 3.6
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 625 NFRSITNYRQVVILTAPLFGSELGQQCLEFLNIPLHYSEVRVFDLESQLCTTGYVLL 795
NF S N + IL A +L + CLE L+ EV++ + LC T Y LL
Sbjct: 119 NFDSSLNIQLSRILAAST-NPDLAEMCLELLHYQAESDEVKLILAKDGLCETIYNLL 174
>AF034421-1|AAB87984.1| 634|Drosophila melanogaster Vimar protein.
Length = 634
Score = 30.3 bits (65), Expect = 3.6
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 625 NFRSITNYRQVVILTAPLFGSELGQQCLEFLNIPLHYSEVRVFDLESQLCTTGYVLL 795
NF S N + IL A +L + CLE L+ EV++ + LC T Y LL
Sbjct: 220 NFDSSLNIQLSRILAAST-NPDLAEMCLELLHYQAESDEVKLILAKDGLCETIYNLL 275
>AE014298-388|AAF45774.1| 739|Drosophila melanogaster CG2845-PA,
isoform A protein.
Length = 739
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = -3
Query: 805 ENPKAKHILLYKAEIQDRKHELLSNEEEYLKILNIVDQVL-NQIEEQLKLQP 653
+ P A +++ Y+ E+ + HEL + E+E ++ LN DQ + + E+ K QP
Sbjct: 46 QEPPAMYLIEYQ-ELTSKLHELEAKEQELMERLNSQDQQEDSSLVERFKEQP 96
>AE013599-268|AAS64794.1| 635|Drosophila melanogaster CG3572-PC,
isoform C protein.
Length = 635
Score = 30.3 bits (65), Expect = 3.6
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 625 NFRSITNYRQVVILTAPLFGSELGQQCLEFLNIPLHYSEVRVFDLESQLCTTGYVLL 795
NF S N + IL A +L + CLE L+ EV++ + LC T Y LL
Sbjct: 221 NFDSSLNIQLSRILAAST-NPDLAEMCLELLHYQAESDEVKLILAKDGLCETIYNLL 276
>AE013599-267|AAF57418.1| 634|Drosophila melanogaster CG3572-PB,
isoform B protein.
Length = 634
Score = 30.3 bits (65), Expect = 3.6
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 625 NFRSITNYRQVVILTAPLFGSELGQQCLEFLNIPLHYSEVRVFDLESQLCTTGYVLL 795
NF S N + IL A +L + CLE L+ EV++ + LC T Y LL
Sbjct: 220 NFDSSLNIQLSRILAAST-NPDLAEMCLELLHYQAESDEVKLILAKDGLCETIYNLL 275
>AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-PB,
isoform B protein.
Length = 4106
Score = 29.9 bits (64), Expect = 4.8
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = -3
Query: 859 ILKTGDLSSSQNLRKLADENPKAKHILLYKAEIQDRKHELLS-------NEEEYLKILNI 701
+LK G+L Q + L E H+L + E+QD+ E LS E+ L+ LN
Sbjct: 3303 VLKNGELEQ-QRIELLQKEG----HLLKQRMEMQDKLLEQLSKSEGDILKNEQLLESLNE 3357
Query: 700 VDQVLNQIEEQLK 662
+ Q QI+E LK
Sbjct: 3358 IKQGSTQIDEALK 3370
>AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-PC,
isoform C protein.
Length = 4061
Score = 29.9 bits (64), Expect = 4.8
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = -3
Query: 859 ILKTGDLSSSQNLRKLADENPKAKHILLYKAEIQDRKHELLS-------NEEEYLKILNI 701
+LK G+L Q + L E H+L + E+QD+ E LS E+ L+ LN
Sbjct: 3258 VLKNGELEQ-QRIELLQKEG----HLLKQRMEMQDKLLEQLSKSEGDILKNEQLLESLNE 3312
Query: 700 VDQVLNQIEEQLK 662
+ Q QI+E LK
Sbjct: 3313 IKQGSTQIDEALK 3325
>AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-PA,
isoform A protein.
Length = 4019
Score = 29.9 bits (64), Expect = 4.8
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = -3
Query: 859 ILKTGDLSSSQNLRKLADENPKAKHILLYKAEIQDRKHELLS-------NEEEYLKILNI 701
+LK G+L Q + L E H+L + E+QD+ E LS E+ L+ LN
Sbjct: 3216 VLKNGELEQ-QRIELLQKEG----HLLKQRMEMQDKLLEQLSKSEGDILKNEQLLESLNE 3270
Query: 700 VDQVLNQIEEQLK 662
+ Q QI+E LK
Sbjct: 3271 IKQGSTQIDEALK 3283
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,504,230
Number of Sequences: 53049
Number of extensions: 645992
Number of successful extensions: 1978
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1973
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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