Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt15e01
         (838 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060987-1|AAL28535.1|  221|Drosophila melanogaster GM14561p pro...   253   2e-67
AE014296-3105|AAF49190.2|  221|Drosophila melanogaster CG11577-P...   252   6e-67

>AY060987-1|AAL28535.1|  221|Drosophila melanogaster GM14561p
           protein.
          Length = 221

 Score =  253 bits (620), Expect = 2e-67
 Identities = 116/176 (65%), Positives = 145/176 (82%), Gaps = 1/176 (0%)
 Frame = -2

Query: 786 QILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGVCDRILEYN 607
           +ILATEL+ RL ETGK H+VIEIGYS+DDV+PKK+T+Y++SELRL+ESLE VC+R+LEYN
Sbjct: 40  KILATELEARLGETGKSHDVIEIGYSVDDVKPKKRTEYRRSELRLLESLENVCERVLEYN 99

Query: 606 IHKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHMKTQCESLLE 427
           +HKERSDSTRFAKGMSQTF+TLHGLVDKGVKVDLGIP ELWDKP  E+T MKTQCE+LLE
Sbjct: 100 LHKERSDSTRFAKGMSQTFQTLHGLVDKGVKVDLGIPYELWDKPPVEVTQMKTQCENLLE 159

Query: 426 ENEIAVEDWYWNHQGKEDLKIYLCTKHAL-KGVDDSCLYEELNNEKGEKGIKERSE 262
           E E  + DWY+ HQ ++ LK +LC  H L K  +  CL E+L   + +K  +E+++
Sbjct: 160 EYEETISDWYFKHQDEKSLKKHLCEDHVLKKKAERECLKEQLAPPEAKKAKREKAK 215


>AE014296-3105|AAF49190.2|  221|Drosophila melanogaster CG11577-PA
           protein.
          Length = 221

 Score =  252 bits (616), Expect = 6e-67
 Identities = 115/176 (65%), Positives = 145/176 (82%), Gaps = 1/176 (0%)
 Frame = -2

Query: 786 QILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGVCDRILEYN 607
           +ILATEL+ RL ETGK H+VIEIGYS+DDV+PKK+T+Y++SELRL+ESLE VC+R+LEYN
Sbjct: 40  KILATELEARLGETGKSHDVIEIGYSVDDVKPKKRTEYRRSELRLLESLENVCERVLEYN 99

Query: 606 IHKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHMKTQCESLLE 427
           +HKERSDSTRFAKGMSQTF+TLHGLVDKGVKVDLGIP ELWDKP  E+T MKTQCE+LLE
Sbjct: 100 LHKERSDSTRFAKGMSQTFQTLHGLVDKGVKVDLGIPYELWDKPPVEVTQMKTQCENLLE 159

Query: 426 ENEIAVEDWYWNHQGKEDLKIYLCTKHAL-KGVDDSCLYEELNNEKGEKGIKERSE 262
           E E  + +WY+ HQ ++ LK +LC  H L K  +  CL E+L   + +K  +E+++
Sbjct: 160 EYEETISEWYFKHQDEKSLKKHLCEDHVLKKKAERECLKEQLAPPEAKKAKREKAK 215


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,350,459
Number of Sequences: 53049
Number of extensions: 577016
Number of successful extensions: 1718
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1718
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)