Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15d19
(243 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37 pro... 48 4e-06
L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37 pro... 48 4e-06
D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37 pro... 48 4e-06
CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein. 48 4e-06
BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein. 48 4e-06
BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37 p... 48 4e-06
AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37 p... 48 4e-06
>S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 207 KGTSXFGKRXNXTXTLCRXCGRSSYXIPKSKC 112
KGTS FGKR N T TLCR CG +Y + KS C
Sbjct: 3 KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTC 34
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2
Query: 125 QNQNAPXCGYPAAKXRSXXWSVK 57
Q CGYPA + R WS K
Sbjct: 30 QKSTCGKCGYPAKRKRKYNWSAK 52
>L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 207 KGTSXFGKRXNXTXTLCRXCGRSSYXIPKSKC 112
KGTS FGKR N T TLCR CG +Y + KS C
Sbjct: 3 KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTC 34
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2
Query: 125 QNQNAPXCGYPAAKXRSXXWSVK 57
Q CGYPA + R WS K
Sbjct: 30 QKSTCGKCGYPAKRKRKYNWSAK 52
>D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 207 KGTSXFGKRXNXTXTLCRXCGRSSYXIPKSKC 112
KGTS FGKR N T TLCR CG +Y + KS C
Sbjct: 3 KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTC 34
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2
Query: 125 QNQNAPXCGYPAAKXRSXXWSVK 57
Q CGYPA + R WS K
Sbjct: 30 QKSTCGKCGYPAKRKRKYNWSAK 52
>CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein.
Length = 97
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 207 KGTSXFGKRXNXTXTLCRXCGRSSYXIPKSKC 112
KGTS FGKR N T TLCR CG +Y + KS C
Sbjct: 3 KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTC 34
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2
Query: 125 QNQNAPXCGYPAAKXRSXXWSVK 57
Q CGYPA + R WS K
Sbjct: 30 QKSTCGKCGYPAKRKRKYNWSAK 52
>BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein.
Length = 97
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 207 KGTSXFGKRXNXTXTLCRXCGRSSYXIPKSKC 112
KGTS FGKR N T TLCR CG +Y + KS C
Sbjct: 3 KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTC 34
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2
Query: 125 QNQNAPXCGYPAAKXRSXXWSVK 57
Q CGYPA + R WS K
Sbjct: 30 QKSTCGKCGYPAKRKRKYNWSAK 52
>BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 207 KGTSXFGKRXNXTXTLCRXCGRSSYXIPKSKC 112
KGTS FGKR N T TLCR CG +Y + KS C
Sbjct: 3 KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTC 34
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2
Query: 125 QNQNAPXCGYPAAKXRSXXWSVK 57
Q CGYPA + R WS K
Sbjct: 30 QKSTCGKCGYPAKRKRKYNWSAK 52
>AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 207 KGTSXFGKRXNXTXTLCRXCGRSSYXIPKSKC 112
KGTS FGKR N T TLCR CG +Y + KS C
Sbjct: 3 KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTC 34
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2
Query: 125 QNQNAPXCGYPAAKXRSXXWSVK 57
Q CGYPA + R WS K
Sbjct: 30 QKSTCGKCGYPAKRKRKYNWSAK 52
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,768,683
Number of Sequences: 237096
Number of extensions: 280178
Number of successful extensions: 243
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 76,859,062
effective HSP length: 58
effective length of database: 63,107,494
effective search space used: 1388364868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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