Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt15d19
         (243 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2108|AAF48428.1|   93|Drosophila melanogaster CG9091-PA...    56   7e-09
BT023224-1|AAY55640.1|  103|Drosophila melanogaster IP02862p pro...    52   8e-08
BT023213-1|AAY55629.1|   89|Drosophila melanogaster IP02962p pro...    52   8e-08
AE013599-3544|AAF46957.1|   89|Drosophila melanogaster CG9873-PA...    52   8e-08
BT023192-1|AAY55608.1|   78|Drosophila melanogaster IP03162p pro...    47   3e-06

>AE014298-2108|AAF48428.1|   93|Drosophila melanogaster CG9091-PA
           protein.
          Length = 93

 Score = 56.0 bits (129), Expect = 7e-09
 Identities = 25/33 (75%), Positives = 25/33 (75%)
 Frame = -1

Query: 207 KGTSXFGKRXNXTXTLCRXCGRSSYXIPKSKCA 109
           KGTS FGKR N T TLCR CGRSSY I KS CA
Sbjct: 3   KGTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCA 35



 Score = 34.3 bits (75), Expect = 0.023
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = -2

Query: 125 QNQNAPXCGYPAAKXRSXXWSVK 57
           Q      CGYPAAK RS  WSVK
Sbjct: 30  QKSTCAQCGYPAAKLRSYNWSVK 52


>BT023224-1|AAY55640.1|  103|Drosophila melanogaster IP02862p
           protein.
          Length = 103

 Score = 52.4 bits (120), Expect = 8e-08
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = -1

Query: 207 KGTSXFGKRXNXTXTLCRXCGRSSYXIPKSKCA 109
           KGT+ FGKR N T T+CR CG SSY + KSKC+
Sbjct: 3   KGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCS 35


>BT023213-1|AAY55629.1|   89|Drosophila melanogaster IP02962p
           protein.
          Length = 89

 Score = 52.4 bits (120), Expect = 8e-08
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = -1

Query: 207 KGTSXFGKRXNXTXTLCRXCGRSSYXIPKSKCA 109
           KGT+ FGKR N T T+CR CG SSY + KSKC+
Sbjct: 3   KGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCS 35



 Score = 27.5 bits (58), Expect = 2.6
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -2

Query: 125 QNQNAPXCGYPAAKXRSXXWSVK 57
           Q       GYPAAK RS  WS K
Sbjct: 30  QKSKCSQSGYPAAKTRSFNWSRK 52


>AE013599-3544|AAF46957.1|   89|Drosophila melanogaster CG9873-PA
           protein.
          Length = 89

 Score = 52.4 bits (120), Expect = 8e-08
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = -1

Query: 207 KGTSXFGKRXNXTXTLCRXCGRSSYXIPKSKCA 109
           KGT+ FGKR N T T+CR CG SSY + KSKC+
Sbjct: 3   KGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCS 35



 Score = 31.5 bits (68), Expect = 0.16
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = -2

Query: 125 QNQNAPXCGYPAAKXRSXXWSVK 57
           Q      CGYPAAK RS  WS K
Sbjct: 30  QKSKCSQCGYPAAKTRSFNWSRK 52


>BT023192-1|AAY55608.1|   78|Drosophila melanogaster IP03162p
           protein.
          Length = 78

 Score = 47.2 bits (107), Expect = 3e-06
 Identities = 23/51 (45%), Positives = 31/51 (60%)
 Frame = -1

Query: 207 KGTSXFGKRXNXTXTLCRXCGRSSYXIPKSKCAXVWISCSKXTIXPLVSEG 55
           KGT+ FGKR N T T+CR CG SSY   +++ A   +SC +     LV +G
Sbjct: 3   KGTTSFGKRHNKTHTICRRCGNSSYH-RRNRSAPSRLSCGQDPKLQLVPKG 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,324,163
Number of Sequences: 53049
Number of extensions: 84006
Number of successful extensions: 289
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 289
length of database: 24,988,368
effective HSP length: 60
effective length of database: 21,805,428
effective search space used: 436108560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)