Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15d17
(816 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25821-1|CAA81066.1| 302|Homo sapiens dodecenoyl-CoA delta-isom... 57 9e-08
Z25820-1|CAA81065.1| 302|Homo sapiens dodecenoyl-CoA delta-isom... 57 9e-08
BC020228-1|AAH20228.1| 285|Homo sapiens DCI protein protein. 57 9e-08
BC019316-1|AAH19316.1| 302|Homo sapiens dodecenoyl-Coenzyme A d... 57 9e-08
BC009631-1|AAH09631.1| 243|Homo sapiens DCI protein protein. 57 9e-08
BC002746-1|AAH02746.1| 285|Homo sapiens DCI protein protein. 57 9e-08
BC000762-1|AAH00762.1| 302|Homo sapiens dodecenoyl-Coenzyme A d... 57 9e-08
L24774-1|AAA35485.1| 266|Homo sapiens delta3, delta2-enoyl-CoA ... 55 3e-07
AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle) ... 31 5.0
AK001379-1|BAA91660.1| 285|Homo sapiens protein ( Homo sapiens ... 31 5.0
>Z25821-1|CAA81066.1| 302|Homo sapiens dodecenoyl-CoA
delta-isomerase protein.
Length = 302
Score = 56.8 bits (131), Expect = 9e-08
Identities = 33/107 (30%), Positives = 54/107 (50%)
Frame = -1
Query: 810 NTISKREAEYALTTARMFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARAL 631
NTI R AE AL +F EAL+VG++D + ++ I AR L
Sbjct: 195 NTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEE-QVQSTALSAIAQWMAIPDHARQL 253
Query: 630 TKQKIRAEPLTWLIKNRKQDTDEFLTFVQNPKVQQSLELYIQALKQK 490
TK +R + L+ R D F++F+ +Q+SL++Y++ LK++
Sbjct: 254 TKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEE 300
>Z25820-1|CAA81065.1| 302|Homo sapiens dodecenoyl-CoA
delta-isomerase protein.
Length = 302
Score = 56.8 bits (131), Expect = 9e-08
Identities = 33/107 (30%), Positives = 54/107 (50%)
Frame = -1
Query: 810 NTISKREAEYALTTARMFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARAL 631
NTI R AE AL +F EAL+VG++D + ++ I AR L
Sbjct: 195 NTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEE-QVQSTALSAIAQWMAIPDHARQL 253
Query: 630 TKQKIRAEPLTWLIKNRKQDTDEFLTFVQNPKVQQSLELYIQALKQK 490
TK +R + L+ R D F++F+ +Q+SL++Y++ LK++
Sbjct: 254 TKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEE 300
>BC020228-1|AAH20228.1| 285|Homo sapiens DCI protein protein.
Length = 285
Score = 56.8 bits (131), Expect = 9e-08
Identities = 33/107 (30%), Positives = 54/107 (50%)
Frame = -1
Query: 810 NTISKREAEYALTTARMFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARAL 631
NTI R AE AL +F EAL+VG++D + ++ I AR L
Sbjct: 178 NTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEE-QVQSTALSAIAQWMAIPDHARQL 236
Query: 630 TKQKIRAEPLTWLIKNRKQDTDEFLTFVQNPKVQQSLELYIQALKQK 490
TK +R + L+ R D F++F+ +Q+SL++Y++ LK++
Sbjct: 237 TKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEE 283
>BC019316-1|AAH19316.1| 302|Homo sapiens dodecenoyl-Coenzyme A
delta isomerase (3,2 trans-enoyl-Coenzyme A isomerase)
protein.
Length = 302
Score = 56.8 bits (131), Expect = 9e-08
Identities = 33/107 (30%), Positives = 54/107 (50%)
Frame = -1
Query: 810 NTISKREAEYALTTARMFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARAL 631
NTI R AE AL +F EAL+VG++D + ++ I AR L
Sbjct: 195 NTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEE-QVQSTALSAIAQWMAIPDHARQL 253
Query: 630 TKQKIRAEPLTWLIKNRKQDTDEFLTFVQNPKVQQSLELYIQALKQK 490
TK +R + L+ R D F++F+ +Q+SL++Y++ LK++
Sbjct: 254 TKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEE 300
>BC009631-1|AAH09631.1| 243|Homo sapiens DCI protein protein.
Length = 243
Score = 56.8 bits (131), Expect = 9e-08
Identities = 33/107 (30%), Positives = 54/107 (50%)
Frame = -1
Query: 810 NTISKREAEYALTTARMFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARAL 631
NTI R AE AL +F EAL+VG++D + ++ I AR L
Sbjct: 136 NTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEE-QVQSTALSAIAQWMAIPDHARQL 194
Query: 630 TKQKIRAEPLTWLIKNRKQDTDEFLTFVQNPKVQQSLELYIQALKQK 490
TK +R + L+ R D F++F+ +Q+SL++Y++ LK++
Sbjct: 195 TKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEE 241
>BC002746-1|AAH02746.1| 285|Homo sapiens DCI protein protein.
Length = 285
Score = 56.8 bits (131), Expect = 9e-08
Identities = 33/107 (30%), Positives = 54/107 (50%)
Frame = -1
Query: 810 NTISKREAEYALTTARMFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARAL 631
NTI R AE AL +F EAL+VG++D + ++ I AR L
Sbjct: 178 NTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEE-QVQSTALSAIAQWMAIPDHARQL 236
Query: 630 TKQKIRAEPLTWLIKNRKQDTDEFLTFVQNPKVQQSLELYIQALKQK 490
TK +R + L+ R D F++F+ +Q+SL++Y++ LK++
Sbjct: 237 TKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEE 283
>BC000762-1|AAH00762.1| 302|Homo sapiens dodecenoyl-Coenzyme A
delta isomerase (3,2 trans-enoyl-Coenzyme A isomerase)
protein.
Length = 302
Score = 56.8 bits (131), Expect = 9e-08
Identities = 33/107 (30%), Positives = 54/107 (50%)
Frame = -1
Query: 810 NTISKREAEYALTTARMFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARAL 631
NTI R AE AL +F EAL+VG++D + ++ I AR L
Sbjct: 195 NTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEE-QVQSTALSAIAQWMAIPDHARQL 253
Query: 630 TKQKIRAEPLTWLIKNRKQDTDEFLTFVQNPKVQQSLELYIQALKQK 490
TK +R + L+ R D F++F+ +Q+SL++Y++ LK++
Sbjct: 254 TKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEE 300
>L24774-1|AAA35485.1| 266|Homo sapiens delta3, delta2-enoyl-CoA
isomerase protein.
Length = 266
Score = 55.2 bits (127), Expect = 3e-07
Identities = 32/107 (29%), Positives = 53/107 (49%)
Frame = -1
Query: 810 NTISKREAEYALTTARMFNTDEALKVGLIDVLATDKADAVXXXXXXXXXXXXISPIARAL 631
NTI R AE A +F EAL+VG++D + ++ I AR L
Sbjct: 159 NTIGHRAAESAPELGLLFRRPEALQVGIVDQVVPEE-QVQSTALSAIAQWMAIPDHARQL 217
Query: 630 TKQKIRAEPLTWLIKNRKQDTDEFLTFVQNPKVQQSLELYIQALKQK 490
TK +R + L+ R D F++F+ +Q+SL++Y++ LK++
Sbjct: 218 TKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEE 264
>AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle)
homolog, microcephaly associated (Drosophila) protein.
Length = 3477
Score = 31.1 bits (67), Expect = 5.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 621 KIRAEPLTWLIKNRKQDTDEFLTFVQNPKVQQSLELYIQALKQKS 487
KI++ W+I+ R ++ TF+Q+ L + QALKQ S
Sbjct: 2317 KIQSSYRRWMIRKRMREMHRAATFIQSTFRMHRLHMRYQALKQAS 2361
>AK001379-1|BAA91660.1| 285|Homo sapiens protein ( Homo sapiens
cDNA FLJ10517 fis, clone NT2RP2000812. ).
Length = 285
Score = 31.1 bits (67), Expect = 5.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 621 KIRAEPLTWLIKNRKQDTDEFLTFVQNPKVQQSLELYIQALKQKS 487
KI++ W+I+ R ++ TF+Q+ L + QALKQ S
Sbjct: 92 KIQSSYRRWMIRKRMREMHRAATFIQSTFRMHRLHMRYQALKQAS 136
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,377,863
Number of Sequences: 237096
Number of extensions: 1832636
Number of successful extensions: 2308
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2308
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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