Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15d16
(801 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069288-1|AAL39433.1| 477|Drosophila melanogaster GM14349p pro... 202 3e-52
AE014297-4508|AAF56990.1| 477|Drosophila melanogaster CG7920-PA... 202 3e-52
X56689-1|CAA40017.1| 716|Drosophila melanogaster Protein on Ecd... 29 5.6
BT001867-1|AAN71637.1| 502|Drosophila melanogaster SD02426p pro... 29 5.6
AY118552-1|AAM49921.1| 693|Drosophila melanogaster LD34072p pro... 29 5.6
AE014296-2942|AAF49317.3| 502|Drosophila melanogaster CG6143-PA... 29 5.6
AE014296-2941|AAS64975.1| 693|Drosophila melanogaster CG6143-PC... 29 5.6
AE014296-2940|AAF49319.3| 716|Drosophila melanogaster CG6143-PB... 29 5.6
AE013599-753|AAG22299.1| 79|Drosophila melanogaster CG33199-PA... 29 5.6
AE014298-1698|AAF48101.1| 1013|Drosophila melanogaster CG15740-P... 29 7.4
AY069099-1|AAL39244.1| 562|Drosophila melanogaster GH11670p pro... 29 9.8
AE014296-1574|AAF50325.2| 562|Drosophila melanogaster CG32031-P... 29 9.8
>AY069288-1|AAL39433.1| 477|Drosophila melanogaster GM14349p
protein.
Length = 477
Score = 202 bits (494), Expect = 3e-52
Identities = 96/123 (78%), Positives = 105/123 (85%)
Frame = -1
Query: 801 EVDLTGQICADSIGTRMYSGFGGQVDFIRGAAEAVDGKGKPIIALVSNTKKGESKIVPTL 622
EVDLTGQ+C+DSIG R YSGFGGQVDFIRGAAE +DG G PIIA+ S T KGESKIVPTL
Sbjct: 354 EVDLTGQVCSDSIGPRFYSGFGGQVDFIRGAAEGLDGLGVPIIAMPSTTNKGESKIVPTL 413
Query: 621 KVGAGVVTTRAHVHYVVTEQGIAYLFGKTLRQRAYELIKIAHPDHREALEKAAFERLKCM 442
K GAGVVT+RAHVHYVVTE GIA LFGK +RQR YELI+IA P HRE LEK AFER+K M
Sbjct: 414 KEGAGVVTSRAHVHYVVTEHGIASLFGKNVRQRMYELIQIADPKHRETLEKQAFERIKVM 473
Query: 441 PAP 433
P+P
Sbjct: 474 PSP 476
>AE014297-4508|AAF56990.1| 477|Drosophila melanogaster CG7920-PA,
isoform A protein.
Length = 477
Score = 202 bits (494), Expect = 3e-52
Identities = 96/123 (78%), Positives = 105/123 (85%)
Frame = -1
Query: 801 EVDLTGQICADSIGTRMYSGFGGQVDFIRGAAEAVDGKGKPIIALVSNTKKGESKIVPTL 622
EVDLTGQ+C+DSIG R YSGFGGQVDFIRGAAE +DG G PIIA+ S T KGESKIVPTL
Sbjct: 354 EVDLTGQVCSDSIGPRFYSGFGGQVDFIRGAAEGLDGLGVPIIAMPSTTNKGESKIVPTL 413
Query: 621 KVGAGVVTTRAHVHYVVTEQGIAYLFGKTLRQRAYELIKIAHPDHREALEKAAFERLKCM 442
K GAGVVT+RAHVHYVVTE GIA LFGK +RQR YELI+IA P HRE LEK AFER+K M
Sbjct: 414 KEGAGVVTSRAHVHYVVTEHGIASLFGKNVRQRMYELIQIADPKHRETLEKQAFERIKVM 473
Query: 441 PAP 433
P+P
Sbjct: 474 PSP 476
>X56689-1|CAA40017.1| 716|Drosophila melanogaster Protein on
Ecdysone Puffs protein.
Length = 716
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 791 SPDRYAPTLSVPACTPVSAGRLTSSAAPRRLWT-VKANPS*LSSPTPRRARA 639
+P AP PA TP A + A+P T A+PS TP RA A
Sbjct: 647 APAEPAPPAKTPAKTPTKAAAPAAVASPAAAATSADASPSPAKKATPARAAA 698
>BT001867-1|AAN71637.1| 502|Drosophila melanogaster SD02426p
protein.
Length = 502
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 791 SPDRYAPTLSVPACTPVSAGRLTSSAAPRRLWT-VKANPS*LSSPTPRRARA 639
+P AP PA TP A + A+P T A+PS TP RA A
Sbjct: 433 APAEPAPPAKTPAKTPTKAAAPAAVASPAAAATSADASPSPAKKATPARAAA 484
>AY118552-1|AAM49921.1| 693|Drosophila melanogaster LD34072p
protein.
Length = 693
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 791 SPDRYAPTLSVPACTPVSAGRLTSSAAPRRLWT-VKANPS*LSSPTPRRARA 639
+P AP PA TP A + A+P T A+PS TP RA A
Sbjct: 624 APAEPAPPAKTPAKTPTKAAAPAAVASPAAAATSADASPSPAKKATPARAAA 675
>AE014296-2942|AAF49317.3| 502|Drosophila melanogaster CG6143-PA,
isoform A protein.
Length = 502
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 791 SPDRYAPTLSVPACTPVSAGRLTSSAAPRRLWT-VKANPS*LSSPTPRRARA 639
+P AP PA TP A + A+P T A+PS TP RA A
Sbjct: 433 APAEPAPPAKTPAKTPTKAAAPAAVASPAAAATSADASPSPAKKATPARAAA 484
>AE014296-2941|AAS64975.1| 693|Drosophila melanogaster CG6143-PC,
isoform C protein.
Length = 693
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 791 SPDRYAPTLSVPACTPVSAGRLTSSAAPRRLWT-VKANPS*LSSPTPRRARA 639
+P AP PA TP A + A+P T A+PS TP RA A
Sbjct: 624 APAEPAPPAKTPAKTPTKAAAPAAVASPAAAATSADASPSPAKKATPARAAA 675
>AE014296-2940|AAF49319.3| 716|Drosophila melanogaster CG6143-PB,
isoform B protein.
Length = 716
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 791 SPDRYAPTLSVPACTPVSAGRLTSSAAPRRLWT-VKANPS*LSSPTPRRARA 639
+P AP PA TP A + A+P T A+PS TP RA A
Sbjct: 647 APAEPAPPAKTPAKTPTKAAAPAAVASPAAAATSADASPSPAKKATPARAAA 698
>AE013599-753|AAG22299.1| 79|Drosophila melanogaster CG33199-PA,
isoform A protein.
Length = 79
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -2
Query: 776 APTLSVPACTPVSAGRLTSSAAPRRLWTVKA 684
APTLS A T S G TSS++P R+ T A
Sbjct: 18 APTLSTQATTHCSHGFTTSSSSPNRVVTRSA 48
>AE014298-1698|AAF48101.1| 1013|Drosophila melanogaster CG15740-PA
protein.
Length = 1013
Score = 29.1 bits (62), Expect = 7.4
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -2
Query: 800 RWTSPDRYAPTLSVPACTPVSAGRLTSSAAPRRLWTVKANPS*LSSPTP 654
++T+P PT + PA +PV+A S AAP L V P+ +P P
Sbjct: 611 QFTAPAYLPPTATAPAPSPVAAPAPVSIAAPAPL--VAPAPAPAPAPAP 657
>AY069099-1|AAL39244.1| 562|Drosophila melanogaster GH11670p
protein.
Length = 562
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 683 LPLPSTASAAPRMKSTCPPKPEYMRVPIESAHICPVRST 799
+P+P+TA A P+ + PKPE P+ S + P + T
Sbjct: 81 VPVPATAPAPPKEEPAPKPKPE----PVPSPVVAPPKPT 115
>AE014296-1574|AAF50325.2| 562|Drosophila melanogaster CG32031-PA,
isoform A protein.
Length = 562
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 683 LPLPSTASAAPRMKSTCPPKPEYMRVPIESAHICPVRST 799
+P+P+TA A P+ + PKPE P+ S + P + T
Sbjct: 81 VPVPATAPAPPKEEPAPKPKPE----PVPSPVVAPPKPT 115
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,070,311
Number of Sequences: 53049
Number of extensions: 648399
Number of successful extensions: 1903
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1903
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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