Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15d12
(829 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J04058-1|AAA52406.1| 333|Homo sapiens ETFA protein. 313 4e-85
BT009796-1|AAP88798.1| 333|Homo sapiens electron-transfer-flavo... 313 4e-85
BC095457-1|AAH95457.1| 333|Homo sapiens electron-transfer-flavo... 313 4e-85
BC015526-1|AAH15526.1| 333|Homo sapiens electron-transfer-flavo... 313 4e-85
AF436657-1|AAN03712.1| 333|Homo sapiens electron transfer flavo... 313 4e-85
AK096678-1|BAC04838.1| 738|Homo sapiens protein ( Homo sapiens ... 32 2.9
AB002340-1|BAA20800.3| 2467|Homo sapiens KIAA0342 protein protein. 32 2.9
>J04058-1|AAA52406.1| 333|Homo sapiens ETFA protein.
Length = 333
Score = 313 bits (769), Expect = 4e-85
Identities = 155/229 (67%), Positives = 185/229 (80%)
Frame = -1
Query: 829 FXFTHILAPATAFGKTVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDP 650
F +THI A A+AFGK +LPRVAAKL+V+PI+DII IK +TFVRTIYAGNA+ T++ +
Sbjct: 103 FNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEK 162
Query: 649 IKVITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSG 470
+KV +VRGT+F A GGSA+ +KA ++ E+L Q+LTKSDRPELT AK +VSG
Sbjct: 163 VKVFSVRGTSFDAAATSGGSASSEKASSTS-PVEISEWLDQKLTKSDRPELTGAKVVVSG 221
Query: 469 GRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGIS 290
GRGLKSG+NFKLLYDLAD+L+ GFVPND+Q+GQTGKIVAP+LYIAVGIS
Sbjct: 222 GRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGIS 281
Query: 289 GAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 143
GAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+T L
Sbjct: 282 GAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330
>BT009796-1|AAP88798.1| 333|Homo sapiens
electron-transfer-flavoprotein, alpha polypeptide
(glutaric aciduria II) protein.
Length = 333
Score = 313 bits (769), Expect = 4e-85
Identities = 155/229 (67%), Positives = 185/229 (80%)
Frame = -1
Query: 829 FXFTHILAPATAFGKTVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDP 650
F +THI A A+AFGK +LPRVAAKL+V+PI+DII IK +TFVRTIYAGNA+ T++ +
Sbjct: 103 FNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEK 162
Query: 649 IKVITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSG 470
+KV +VRGT+F A GGSA+ +KA ++ E+L Q+LTKSDRPELT AK +VSG
Sbjct: 163 VKVFSVRGTSFDAAATSGGSASSEKASSTS-PVEISEWLDQKLTKSDRPELTGAKVVVSG 221
Query: 469 GRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGIS 290
GRGLKSG+NFKLLYDLAD+L+ GFVPND+Q+GQTGKIVAP+LYIAVGIS
Sbjct: 222 GRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGIS 281
Query: 289 GAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 143
GAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+T L
Sbjct: 282 GAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330
>BC095457-1|AAH95457.1| 333|Homo sapiens
electron-transfer-flavoprotein, alpha polypeptide
(glutaric aciduria II) protein.
Length = 333
Score = 313 bits (769), Expect = 4e-85
Identities = 155/229 (67%), Positives = 185/229 (80%)
Frame = -1
Query: 829 FXFTHILAPATAFGKTVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDP 650
F +THI A A+AFGK +LPRVAAKL+V+PI+DII IK +TFVRTIYAGNA+ T++ +
Sbjct: 103 FNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEK 162
Query: 649 IKVITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSG 470
+KV +VRGT+F A GGSA+ +KA ++ E+L Q+LTKSDRPELT AK +VSG
Sbjct: 163 VKVFSVRGTSFDAAATSGGSASSEKASSTS-PVEISEWLDQKLTKSDRPELTGAKVVVSG 221
Query: 469 GRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGIS 290
GRGLKSG+NFKLLYDLAD+L+ GFVPND+Q+GQTGKIVAP+LYIAVGIS
Sbjct: 222 GRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGIS 281
Query: 289 GAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 143
GAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+T L
Sbjct: 282 GAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330
>BC015526-1|AAH15526.1| 333|Homo sapiens
electron-transfer-flavoprotein, alpha polypeptide
(glutaric aciduria II) protein.
Length = 333
Score = 313 bits (769), Expect = 4e-85
Identities = 155/229 (67%), Positives = 185/229 (80%)
Frame = -1
Query: 829 FXFTHILAPATAFGKTVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDP 650
F +THI A A+AFGK +LPRVAAKL+V+PI+DII IK +TFVRTIYAGNA+ T++ +
Sbjct: 103 FNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEK 162
Query: 649 IKVITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSG 470
+KV +VRGT+F A GGSA+ +KA ++ E+L Q+LTKSDRPELT AK +VSG
Sbjct: 163 VKVFSVRGTSFDAAATSGGSASSEKASSTS-PVEISEWLDQKLTKSDRPELTGAKVVVSG 221
Query: 469 GRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGIS 290
GRGLKSG+NFKLLYDLAD+L+ GFVPND+Q+GQTGKIVAP+LYIAVGIS
Sbjct: 222 GRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGIS 281
Query: 289 GAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 143
GAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+T L
Sbjct: 282 GAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330
>AF436657-1|AAN03712.1| 333|Homo sapiens electron transfer
flavoprotein alpha-subunit protein.
Length = 333
Score = 313 bits (769), Expect = 4e-85
Identities = 155/229 (67%), Positives = 185/229 (80%)
Frame = -1
Query: 829 FXFTHILAPATAFGKTVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDP 650
F +THI A A+AFGK +LPRVAAKL+V+PI+DII IK +TFVRTIYAGNA+ T++ +
Sbjct: 103 FNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEK 162
Query: 649 IKVITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSG 470
+KV +VRGT+F A GGSA+ +KA ++ E+L Q+LTKSDRPELT AK +VSG
Sbjct: 163 VKVFSVRGTSFDAAATSGGSASSEKASSTS-PVEISEWLDQKLTKSDRPELTGAKVVVSG 221
Query: 469 GRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGIS 290
GRGLKSG+NFKLLYDLAD+L+ GFVPND+Q+GQTGKIVAP+LYIAVGIS
Sbjct: 222 GRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGIS 281
Query: 289 GAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 143
GAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+T L
Sbjct: 282 GAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330
>AK096678-1|BAC04838.1| 738|Homo sapiens protein ( Homo sapiens
cDNA FLJ39359 fis, clone PEBLM2004290. ).
Length = 738
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -2
Query: 690 MLVTLY*PLRPKILSRSSLFVAQHSLQSHWREGLQQLIKHLRATIRL 550
ML L + K++ + + Q W +GLQ+ +KHL+ +I+L
Sbjct: 11 MLKKLSSKVMTKVIKKKIILAIQQLGNGEWTQGLQKRLKHLKGSIQL 57
>AB002340-1|BAA20800.3| 2467|Homo sapiens KIAA0342 protein protein.
Length = 2467
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -2
Query: 690 MLVTLY*PLRPKILSRSSLFVAQHSLQSHWREGLQQLIKHLRATIRL 550
ML L + K++ + + Q W +GLQ+ +KHL+ +I+L
Sbjct: 340 MLKKLSSKVMTKVIKKKIILAIQQLGNGEWTQGLQKRLKHLKGSIQL 386
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,535,932
Number of Sequences: 237096
Number of extensions: 2254129
Number of successful extensions: 9221
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9213
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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