Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15d12
(829 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF160913-1|AAD46853.2| 340|Drosophila melanogaster LD07532p pro... 347 8e-96
AF132155-1|AAD34743.1| 330|Drosophila melanogaster unknown prot... 347 8e-96
AE013599-1338|AAM68717.1| 330|Drosophila melanogaster CG8996-PB... 347 8e-96
AE013599-1337|AAF58627.1| 330|Drosophila melanogaster CG8996-PA... 347 8e-96
DQ177377-1|ABA60838.1| 528|Drosophila melanogaster Iris protein. 31 1.5
DQ177376-1|ABA60837.1| 528|Drosophila melanogaster Iris protein. 31 1.5
DQ177372-1|ABA60833.1| 528|Drosophila melanogaster Iris protein. 31 1.5
DQ177369-1|ABA60830.1| 528|Drosophila melanogaster Iris protein. 31 1.5
DQ177379-1|ABA60840.1| 531|Drosophila melanogaster Iris protein. 30 3.4
DQ177378-1|ABA60839.1| 528|Drosophila melanogaster Iris protein. 30 3.4
DQ177373-1|ABA60834.1| 528|Drosophila melanogaster Iris protein. 29 7.8
>AF160913-1|AAD46853.2| 340|Drosophila melanogaster LD07532p
protein.
Length = 340
Score = 347 bits (854), Expect = 8e-96
Identities = 173/229 (75%), Positives = 190/229 (82%)
Frame = -1
Query: 829 FXFTHILAPATAFGKTVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDP 650
F FTHILA A+AFGK VLPRVAAKLDVSPI++II +K +TFVRTIYAGNAILTL++KD
Sbjct: 112 FKFTHILAGASAFGKNVLPRVAAKLDVSPISEIIDVKSDDTFVRTIYAGNAILTLKSKDA 171
Query: 649 IKVITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSG 470
+KVITVR T FP GGS A+++AP GD+ + L EF+ QELTKSDRPEL AK IVSG
Sbjct: 172 VKVITVRSTNFPPAATSGGSGAVEQAPAGDFASSLSEFVSQELTKSDRPELAGAKVIVSG 231
Query: 469 GRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGIS 290
GRGLKSGDNFKLLYDLADK GFVPNDLQIGQTGKIVAP+LYIAVGIS
Sbjct: 232 GRGLKSGDNFKLLYDLADKFGAAVGASRAAVDAGFVPNDLQIGQTGKIVAPELYIAVGIS 291
Query: 289 GAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 143
GAIQHLAGMKDSKTIVAINKDPEAPIFQV+D G+VADLFKAVPELT KL
Sbjct: 292 GAIQHLAGMKDSKTIVAINKDPEAPIFQVADIGIVADLFKAVPELTGKL 340
>AF132155-1|AAD34743.1| 330|Drosophila melanogaster unknown
protein.
Length = 330
Score = 347 bits (854), Expect = 8e-96
Identities = 173/229 (75%), Positives = 190/229 (82%)
Frame = -1
Query: 829 FXFTHILAPATAFGKTVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDP 650
F FTHILA A+AFGK VLPRVAAKLDVSPI++II +K +TFVRTIYAGNAILTL++KD
Sbjct: 102 FKFTHILAGASAFGKNVLPRVAAKLDVSPISEIIDVKSDDTFVRTIYAGNAILTLKSKDA 161
Query: 649 IKVITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSG 470
+KVITVR T FP GGS A+++AP GD+ + L EF+ QELTKSDRPEL AK IVSG
Sbjct: 162 VKVITVRSTNFPPAATSGGSGAVEQAPAGDFASSLSEFVSQELTKSDRPELAGAKVIVSG 221
Query: 469 GRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGIS 290
GRGLKSGDNFKLLYDLADK GFVPNDLQIGQTGKIVAP+LYIAVGIS
Sbjct: 222 GRGLKSGDNFKLLYDLADKFGAAVGASRAAVDAGFVPNDLQIGQTGKIVAPELYIAVGIS 281
Query: 289 GAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 143
GAIQHLAGMKDSKTIVAINKDPEAPIFQV+D G+VADLFKAVPELT KL
Sbjct: 282 GAIQHLAGMKDSKTIVAINKDPEAPIFQVADIGIVADLFKAVPELTGKL 330
>AE013599-1338|AAM68717.1| 330|Drosophila melanogaster CG8996-PB,
isoform B protein.
Length = 330
Score = 347 bits (854), Expect = 8e-96
Identities = 173/229 (75%), Positives = 190/229 (82%)
Frame = -1
Query: 829 FXFTHILAPATAFGKTVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDP 650
F FTHILA A+AFGK VLPRVAAKLDVSPI++II +K +TFVRTIYAGNAILTL++KD
Sbjct: 102 FKFTHILAGASAFGKNVLPRVAAKLDVSPISEIIDVKSDDTFVRTIYAGNAILTLKSKDA 161
Query: 649 IKVITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSG 470
+KVITVR T FP GGS A+++AP GD+ + L EF+ QELTKSDRPEL AK IVSG
Sbjct: 162 VKVITVRSTNFPPAATSGGSGAVEQAPAGDFASSLSEFVSQELTKSDRPELAGAKVIVSG 221
Query: 469 GRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGIS 290
GRGLKSGDNFKLLYDLADK GFVPNDLQIGQTGKIVAP+LYIAVGIS
Sbjct: 222 GRGLKSGDNFKLLYDLADKFGAAVGASRAAVDAGFVPNDLQIGQTGKIVAPELYIAVGIS 281
Query: 289 GAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 143
GAIQHLAGMKDSKTIVAINKDPEAPIFQV+D G+VADLFKAVPELT KL
Sbjct: 282 GAIQHLAGMKDSKTIVAINKDPEAPIFQVADIGIVADLFKAVPELTGKL 330
>AE013599-1337|AAF58627.1| 330|Drosophila melanogaster CG8996-PA,
isoform A protein.
Length = 330
Score = 347 bits (854), Expect = 8e-96
Identities = 173/229 (75%), Positives = 190/229 (82%)
Frame = -1
Query: 829 FXFTHILAPATAFGKTVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDP 650
F FTHILA A+AFGK VLPRVAAKLDVSPI++II +K +TFVRTIYAGNAILTL++KD
Sbjct: 102 FKFTHILAGASAFGKNVLPRVAAKLDVSPISEIIDVKSDDTFVRTIYAGNAILTLKSKDA 161
Query: 649 IKVITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSG 470
+KVITVR T FP GGS A+++AP GD+ + L EF+ QELTKSDRPEL AK IVSG
Sbjct: 162 VKVITVRSTNFPPAATSGGSGAVEQAPAGDFASSLSEFVSQELTKSDRPELAGAKVIVSG 221
Query: 469 GRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGIS 290
GRGLKSGDNFKLLYDLADK GFVPNDLQIGQTGKIVAP+LYIAVGIS
Sbjct: 222 GRGLKSGDNFKLLYDLADKFGAAVGASRAAVDAGFVPNDLQIGQTGKIVAPELYIAVGIS 281
Query: 289 GAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 143
GAIQHLAGMKDSKTIVAINKDPEAPIFQV+D G+VADLFKAVPELT KL
Sbjct: 282 GAIQHLAGMKDSKTIVAINKDPEAPIFQVADIGIVADLFKAVPELTGKL 330
>DQ177377-1|ABA60838.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -1
Query: 685 GNAILTLEAKDPIK--VITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKS 512
G+ IL++++ ++ +T+RG P +GG A + K P+ ++ +E Q L
Sbjct: 388 GSGILSIQSDCAVRSPAVTIRGEVREGVPSKGGYATLQKDPKSSRESVTLESFNQLLAIV 447
Query: 511 DRPELTSAK 485
+ EL K
Sbjct: 448 GKLELNQKK 456
>DQ177376-1|ABA60837.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -1
Query: 685 GNAILTLEAKDPIK--VITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKS 512
G+ IL++++ ++ +T+RG P +GG A + K P+ ++ +E Q L
Sbjct: 388 GSGILSIQSDCAVRSPAVTIRGEVREGVPSKGGYATLQKDPKSSRESVTLESFNQLLAIV 447
Query: 511 DRPELTSAK 485
+ EL K
Sbjct: 448 GKLELNQKK 456
>DQ177372-1|ABA60833.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -1
Query: 685 GNAILTLEAKDPIK--VITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKS 512
G+ IL++++ ++ +T+RG P +GG A + K P+ ++ +E Q L
Sbjct: 388 GSGILSIQSDCAVRSPAVTIRGEVREGVPSKGGYATLQKDPKSSRESVTLESFNQLLAIV 447
Query: 511 DRPELTSAK 485
+ EL K
Sbjct: 448 GKLELNQKK 456
>DQ177369-1|ABA60830.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -1
Query: 685 GNAILTLEAKDPIK--VITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKS 512
G+ IL++++ ++ +T+RG P +GG A + K P+ ++ +E Q L
Sbjct: 388 GSGILSIQSDCAVRSPAVTIRGEVREGVPSKGGYATLQKDPKSSRESVTLESFNQLLAIV 447
Query: 511 DRPELTSAK 485
+ EL K
Sbjct: 448 GKLELNQKK 456
>DQ177379-1|ABA60840.1| 531|Drosophila melanogaster Iris protein.
Length = 531
Score = 30.3 bits (65), Expect = 3.4
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -1
Query: 685 GNAILTLEAKDPIK--VITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKS 512
G+ IL++++ ++ +T+RG P +GG A + K P+ ++ +E Q L
Sbjct: 388 GSGILSIQSDCAVRSPAVTLRGEVRERVPSKGGYATLQKDPKSSRESVTLESFNQLLAIV 447
Query: 511 DRPELTSAK 485
+ EL K
Sbjct: 448 GKLELNQKK 456
>DQ177378-1|ABA60839.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 30.3 bits (65), Expect = 3.4
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -1
Query: 685 GNAILTLEAKDPIK--VITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKS 512
G+ IL++++ ++ +T+RG P +GG A + K P+ ++ +E Q L
Sbjct: 388 GSGILSIQSDCAVRSPAVTLRGEVRERVPSKGGYATLQKDPKSSRESVTLESFNQLLAIV 447
Query: 511 DRPELTSAK 485
+ EL K
Sbjct: 448 GKLELNQKK 456
>DQ177373-1|ABA60834.1| 528|Drosophila melanogaster Iris protein.
Length = 528
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -1
Query: 685 GNAILTLEAKDPIK--VITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKS 512
G+ IL++++ ++ + +RG P +GG A + K P+ ++ +E Q L
Sbjct: 388 GSGILSIQSDCAVRSPAVALRGEVRERVPSKGGYATLQKEPKSSQESVTLESFNQLLAIV 447
Query: 511 DRPELTSAK 485
+ EL K
Sbjct: 448 GKLELNQKK 456
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,898,449
Number of Sequences: 53049
Number of extensions: 707041
Number of successful extensions: 2227
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2225
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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