Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15d10
(844 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D00726-1|BAA00628.1| 423|Homo sapiens ferrochelatase precursor ... 73 1e-12
BX571744-1|CAE11869.1| 416|Homo sapiens hypothetical protein pr... 73 1e-12
BT019959-1|AAV38762.1| 422|Homo sapiens ferrochelatase (protopo... 73 1e-12
BT019958-1|AAV38761.1| 423|Homo sapiens ferrochelatase (protopo... 73 1e-12
BC039841-1|AAH39841.2| 423|Homo sapiens ferrochelatase (protopo... 73 1e-12
AK223190-1|BAD96910.1| 420|Homo sapiens Hypothetical protein DK... 73 1e-12
AK092416-1|BAC03882.1| 429|Homo sapiens protein ( Homo sapiens ... 73 1e-12
AJ250235-1|CAB65962.1| 423|Homo sapiens ferrochelatase protein. 73 1e-12
>D00726-1|BAA00628.1| 423|Homo sapiens ferrochelatase precursor
protein.
Length = 423
Score = 73.3 bits (172), Expect = 1e-12
Identities = 36/74 (48%), Positives = 45/74 (60%)
Frame = -1
Query: 844 LHELDIEYCDEVAKEAGILQIERAEAPNVHPTFIAALADVVAGHISNGPRISKQFLTRCP 665
L+ELDIEY +AKE G+ I RAE+ N +P F ALAD+V HI + SKQ CP
Sbjct: 345 LYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCP 404
Query: 664 HCVSQRCLASKEFF 623
CV+ C +K FF
Sbjct: 405 LCVNPVCRETKSFF 418
>BX571744-1|CAE11869.1| 416|Homo sapiens hypothetical protein
protein.
Length = 416
Score = 73.3 bits (172), Expect = 1e-12
Identities = 36/74 (48%), Positives = 45/74 (60%)
Frame = -1
Query: 844 LHELDIEYCDEVAKEAGILQIERAEAPNVHPTFIAALADVVAGHISNGPRISKQFLTRCP 665
L+ELDIEY +AKE G+ I RAE+ N +P F ALAD+V HI + SKQ CP
Sbjct: 338 LYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCP 397
Query: 664 HCVSQRCLASKEFF 623
CV+ C +K FF
Sbjct: 398 LCVNPVCRETKSFF 411
>BT019959-1|AAV38762.1| 422|Homo sapiens ferrochelatase
(protoporphyria) protein.
Length = 422
Score = 73.3 bits (172), Expect = 1e-12
Identities = 36/74 (48%), Positives = 45/74 (60%)
Frame = -1
Query: 844 LHELDIEYCDEVAKEAGILQIERAEAPNVHPTFIAALADVVAGHISNGPRISKQFLTRCP 665
L+ELDIEY +AKE G+ I RAE+ N +P F ALAD+V HI + SKQ CP
Sbjct: 344 LYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCP 403
Query: 664 HCVSQRCLASKEFF 623
CV+ C +K FF
Sbjct: 404 LCVNPVCRETKSFF 417
>BT019958-1|AAV38761.1| 423|Homo sapiens ferrochelatase
(protoporphyria) protein.
Length = 423
Score = 73.3 bits (172), Expect = 1e-12
Identities = 36/74 (48%), Positives = 45/74 (60%)
Frame = -1
Query: 844 LHELDIEYCDEVAKEAGILQIERAEAPNVHPTFIAALADVVAGHISNGPRISKQFLTRCP 665
L+ELDIEY +AKE G+ I RAE+ N +P F ALAD+V HI + SKQ CP
Sbjct: 345 LYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCP 404
Query: 664 HCVSQRCLASKEFF 623
CV+ C +K FF
Sbjct: 405 LCVNPVCRETKSFF 418
>BC039841-1|AAH39841.2| 423|Homo sapiens ferrochelatase
(protoporphyria) protein.
Length = 423
Score = 73.3 bits (172), Expect = 1e-12
Identities = 36/74 (48%), Positives = 45/74 (60%)
Frame = -1
Query: 844 LHELDIEYCDEVAKEAGILQIERAEAPNVHPTFIAALADVVAGHISNGPRISKQFLTRCP 665
L+ELDIEY +AKE G+ I RAE+ N +P F ALAD+V HI + SKQ CP
Sbjct: 345 LYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCP 404
Query: 664 HCVSQRCLASKEFF 623
CV+ C +K FF
Sbjct: 405 LCVNPVCRETKSFF 418
>AK223190-1|BAD96910.1| 420|Homo sapiens Hypothetical protein
DKFZp686P18130 variant protein.
Length = 420
Score = 73.3 bits (172), Expect = 1e-12
Identities = 36/74 (48%), Positives = 45/74 (60%)
Frame = -1
Query: 844 LHELDIEYCDEVAKEAGILQIERAEAPNVHPTFIAALADVVAGHISNGPRISKQFLTRCP 665
L+ELDIEY +AKE G+ I RAE+ N +P F ALAD+V HI + SKQ CP
Sbjct: 342 LYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCP 401
Query: 664 HCVSQRCLASKEFF 623
CV+ C +K FF
Sbjct: 402 LCVNPVCRETKSFF 415
>AK092416-1|BAC03882.1| 429|Homo sapiens protein ( Homo sapiens
cDNA FLJ35097 fis, clone PLACE6006222, highly similar to
FERROCHELATASE PRECURSOR (EC 4.99.1.1). ).
Length = 429
Score = 73.3 bits (172), Expect = 1e-12
Identities = 36/74 (48%), Positives = 45/74 (60%)
Frame = -1
Query: 844 LHELDIEYCDEVAKEAGILQIERAEAPNVHPTFIAALADVVAGHISNGPRISKQFLTRCP 665
L+ELDIEY +AKE G+ I RAE+ N +P F ALAD+V HI + SKQ CP
Sbjct: 351 LYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCP 410
Query: 664 HCVSQRCLASKEFF 623
CV+ C +K FF
Sbjct: 411 LCVNPVCRETKSFF 424
>AJ250235-1|CAB65962.1| 423|Homo sapiens ferrochelatase protein.
Length = 423
Score = 73.3 bits (172), Expect = 1e-12
Identities = 36/74 (48%), Positives = 45/74 (60%)
Frame = -1
Query: 844 LHELDIEYCDEVAKEAGILQIERAEAPNVHPTFIAALADVVAGHISNGPRISKQFLTRCP 665
L+ELDIEY +AKE G+ I RAE+ N +P F ALAD+V HI + SKQ CP
Sbjct: 345 LYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCP 404
Query: 664 HCVSQRCLASKEFF 623
CV+ C +K FF
Sbjct: 405 LCVNPVCRETKSFF 418
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,532,397
Number of Sequences: 237096
Number of extensions: 2701535
Number of successful extensions: 5715
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5715
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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