Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15d08
(508 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 50 2e-08
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 49 2e-08
AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein pro... 31 0.005
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 22 3.2
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 4.2
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 5.6
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 5.6
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 5.6
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 5.6
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 5.6
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 5.6
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 5.6
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 5.6
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 5.6
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 5.6
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 5.6
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 5.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 5.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 5.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 5.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 5.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 5.6
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 21 7.3
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 49.6 bits (113), Expect = 2e-08
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Frame = -1
Query: 394 PLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPNSIIKSVTTITN--DSEMETKS 221
P E+S +GD T +SS T FK+ +EE +P+ + T+T+ + +T++
Sbjct: 37 PSFELSKNGDEWTFTSSSGDNTYTKTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFKTET 96
Query: 220 VIPDTGAKCGRHYQFTDEECIVTLTHENASVSGKRYFRRV 101
+ D+ K R Y+F+D E +V ++ + V R ++RV
Sbjct: 97 QVNDS-LKVTRLYEFSDNELLVHISTNKSDVKATRVYKRV 135
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 49.2 bits (112), Expect = 2e-08
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = -1
Query: 436 GVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEK-MPNSIIKSV 260
GV M RK+ S SP++E++ + T+K +S + E KFKLGEE+EE+ + +KSV
Sbjct: 25 GVGIMTRKVGSSVSPVVELTENNGLYTLKTTSPFKNTEIKFKLGEEFEEETVDGRKVKSV 84
Query: 259 TTITNDSEMETK 224
T+ + ++ +
Sbjct: 85 CTLDGNKLIQVQ 96
>AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein
protein.
Length = 105
Score = 31.5 bits (68), Expect = 0.005
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 394 PLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPNSIIKSVTTITN 245
P E+S +GD T +SS T FK+ +EE +P+ + T+T+
Sbjct: 35 PSFELSKNGDEWTFTSSSGDNTYTKTFKMNVPFEETLPSLPDRKFQTVTS 84
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 153 LSHMKMQVFLGNATFAECSRPYGEI 79
LSH+ + L T EC + YG I
Sbjct: 306 LSHILQKTTLNMLTQVECYKYYGNI 330
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.8 bits (44), Expect = 4.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 304 EEYEEKMPNSIIKSVTTITNDSEMETKSVI 215
+ YE +P+ ++ SVT++ D EM + I
Sbjct: 111 KSYEIWVPDIVMHSVTSVGIDLEMPSVECI 140
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 501 LSNCFNFSCYNGN 463
LSN +N+S YN N
Sbjct: 85 LSNNYNYSNYNNN 97
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 501 LSNCFNFSCYNGN 463
LSN +N+S YN N
Sbjct: 85 LSNNYNYSNYNNN 97
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 501 LSNCFNFSCYNGN 463
LSN +N+S YN N
Sbjct: 85 LSNNYNYSNYNNN 97
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 501 LSNCFNFSCYNGN 463
LSN +N+S YN N
Sbjct: 85 LSNNYNYSNYNNN 97
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 501 LSNCFNFSCYNGN 463
LSN +N+S YN N
Sbjct: 85 LSNNYNYSNYNNN 97
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 501 LSNCFNFSCYNGN 463
LSN +N+S YN N
Sbjct: 85 LSNNYNYSNYNNN 97
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 501 LSNCFNFSCYNGNCK 457
LSN +N++ YN N K
Sbjct: 85 LSNNYNYNNYNNNYK 99
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 501 LSNCFNFSCYNGNCK 457
LSN +N++ YN N K
Sbjct: 85 LSNNYNYNNYNNNYK 99
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 501 LSNCFNFSCYNGNCK 457
LSN +N++ YN N K
Sbjct: 85 LSNNYNYNNYNNNYK 99
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 501 LSNCFNFSCYNGNCK 457
LSN +N++ YN N K
Sbjct: 85 LSNNYNYNNYNNNYK 99
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 5.6
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -3
Query: 431 TIYGSKNDVNVITINGNFN*WGYYDYKKFIIVTNSRTQI 315
TI+ + N N N N+N Y +YKK N QI
Sbjct: 89 TIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNINYIEQI 127
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 501 LSNCFNFSCYNGNCK 457
LSN +N++ YN N K
Sbjct: 318 LSNNYNYNNYNNNYK 332
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 501 LSNCFNFSCYNGNCK 457
LSN +N++ YN N K
Sbjct: 318 LSNNYNYNNYNNNYK 332
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 501 LSNCFNFSCYNGNCK 457
LSN +N++ YN N K
Sbjct: 318 LSNNYNYNNYNNNYK 332
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 501 LSNCFNFSCYNGNCK 457
LSN +N++ YN N K
Sbjct: 318 LSNNYNYNNYNNNYK 332
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 501 LSNCFNFSCYNGNCK 457
LSN +N++ YN N K
Sbjct: 318 LSNNYNYNNYNNNYK 332
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 501 LSNCFNFSCYNGNCK 457
LSN +N++ YN N K
Sbjct: 307 LSNNYNYNNYNNNYK 321
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 21.0 bits (42), Expect = 7.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 404 NVITINGNFN*WGYYDYKKFIIVTNSRTQI 315
NV+ NGNFN D + ++ N Q+
Sbjct: 71 NVVDENGNFNEKNTRDIVQAVLDDNETDQL 100
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,852
Number of Sequences: 438
Number of extensions: 2895
Number of successful extensions: 23
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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