Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt15d06
         (832 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC127679-1|AAI27680.1|  202|Homo sapiens hypothetical protein MG...   104   3e-22
BC094837-1|AAH94837.1|  201|Homo sapiens MGC3196 protein protein.     104   3e-22
BC020914-1|AAH20914.1|  206|Homo sapiens Similar to RIKEN cDNA 0...   104   3e-22
BC042801-1|AAH42801.1|  188|Homo sapiens MGC3196 protein protein.     102   1e-21
BC008643-1|AAH08643.1|  201|Homo sapiens Similar to RIKEN cDNA 0...   102   1e-21
AM746210-1|CAN88919.1|  302|Homo sapiens PDHA1/LOC79064 protein ...    33   1.7  
X69943-1|CAA49561.1|  100|Homo sapiens GTP binding protein protein.    32   2.9  

>BC127679-1|AAI27680.1|  202|Homo sapiens hypothetical protein
           MGC3196 protein.
          Length = 202

 Score =  104 bits (250), Expect = 3e-22
 Identities = 58/176 (32%), Positives = 88/176 (50%)
 Frame = -2

Query: 621 TNVAKDVILFKYENPSFYKYMNIFAVVQYAFWMYLGIFAFSTLKDAPVDKSKITEDTPWY 442
           T + +DV+LF+++   F+  + +F   Q  FW  + + A S     PV    +  + P  
Sbjct: 28  TTLQRDVLLFEHDRGRFFTILGLFCAGQGVFWASMAVAAVSR---PPVPVQPLDAEVPNR 84

Query: 441 RKINLGENKYKNTLGTLAVIIGAGSLTMIWMYTLRSVRYLVLHKGGKHVSLVTYAPFGRN 262
              +L    ++  L      IGA  L    +++LRSVR +VL  GG+ V+L T+APFG  
Sbjct: 85  GPFDLRSALWRYGLAVGCGAIGALVLGAGLLFSLRSVRSVVLRAGGQQVTLTTHAPFGLG 144

Query: 261 RSMKVPIEDICCQERRTVAKVQLPLKVRNRMMHYMLDMRGEFKNPLLFDCTAGLLR 94
               VP++ + C   R      LPLKV+ R  +++LD  G F N  LFD T G  R
Sbjct: 145 AHFTVPLKQVSCMAHRGEVPAMLPLKVKGRRFYFLLDKTGHFPNTKLFDNTVGAYR 200


>BC094837-1|AAH94837.1|  201|Homo sapiens MGC3196 protein protein.
          Length = 201

 Score =  104 bits (250), Expect = 3e-22
 Identities = 58/176 (32%), Positives = 88/176 (50%)
 Frame = -2

Query: 621 TNVAKDVILFKYENPSFYKYMNIFAVVQYAFWMYLGIFAFSTLKDAPVDKSKITEDTPWY 442
           T + +DV+LF+++   F+  + +F   Q  FW  + + A S     PV    +  + P  
Sbjct: 27  TTLQRDVLLFEHDRGRFFTILGLFCAGQGVFWASMAVAAVSR---PPVPVQPLDAEVPNR 83

Query: 441 RKINLGENKYKNTLGTLAVIIGAGSLTMIWMYTLRSVRYLVLHKGGKHVSLVTYAPFGRN 262
              +L    ++  L      IGA  L    +++LRSVR +VL  GG+ V+L T+APFG  
Sbjct: 84  GPFDLRSALWRYGLAVGCGAIGALVLGAGLLFSLRSVRSVVLRAGGQQVTLTTHAPFGLG 143

Query: 261 RSMKVPIEDICCQERRTVAKVQLPLKVRNRMMHYMLDMRGEFKNPLLFDCTAGLLR 94
               VP++ + C   R      LPLKV+ R  +++LD  G F N  LFD T G  R
Sbjct: 144 AHFTVPLKQVSCMAHRGEVPAMLPLKVKGRRFYFLLDKTGHFPNTKLFDNTVGAYR 199


>BC020914-1|AAH20914.1|  206|Homo sapiens Similar to RIKEN cDNA
           0610006I08 gene protein.
          Length = 206

 Score =  104 bits (250), Expect = 3e-22
 Identities = 58/176 (32%), Positives = 88/176 (50%)
 Frame = -2

Query: 621 TNVAKDVILFKYENPSFYKYMNIFAVVQYAFWMYLGIFAFSTLKDAPVDKSKITEDTPWY 442
           T + +DV+LF+++   F+  + +F   Q  FW  + + A S     PV    +  + P  
Sbjct: 32  TTLQRDVLLFEHDRGRFFTILGLFCAGQGVFWASMAVAAVSR---PPVPVQPLDAEVPNR 88

Query: 441 RKINLGENKYKNTLGTLAVIIGAGSLTMIWMYTLRSVRYLVLHKGGKHVSLVTYAPFGRN 262
              +L    ++  L      IGA  L    +++LRSVR +VL  GG+ V+L T+APFG  
Sbjct: 89  GPFDLRSALWRYGLAVGCGAIGALVLGAGLLFSLRSVRSVVLRAGGQQVTLTTHAPFGLG 148

Query: 261 RSMKVPIEDICCQERRTVAKVQLPLKVRNRMMHYMLDMRGEFKNPLLFDCTAGLLR 94
               VP++ + C   R      LPLKV+ R  +++LD  G F N  LFD T G  R
Sbjct: 149 AHFTVPLKQVSCMAHRGEVPAMLPLKVKGRRFYFLLDKTGHFPNTKLFDNTVGAYR 204


>BC042801-1|AAH42801.1|  188|Homo sapiens MGC3196 protein protein.
          Length = 188

 Score =  102 bits (245), Expect = 1e-21
 Identities = 57/172 (33%), Positives = 86/172 (50%)
 Frame = -2

Query: 609 KDVILFKYENPSFYKYMNIFAVVQYAFWMYLGIFAFSTLKDAPVDKSKITEDTPWYRKIN 430
           +DV+LF+++   F+  + +F   Q  FW  + + A S     PV    +  + P     +
Sbjct: 18  RDVLLFEHDRGRFFTILGLFCAGQGVFWASMAVAAVSR---PPVPVQPLDAEVPNRGPFD 74

Query: 429 LGENKYKNTLGTLAVIIGAGSLTMIWMYTLRSVRYLVLHKGGKHVSLVTYAPFGRNRSMK 250
           L    ++  L      IGA  L    +++LRSVR +VL  GG+ V+L T+APFG      
Sbjct: 75  LRSALWRYGLAVGCGAIGALVLGAGLLFSLRSVRSVVLRAGGQQVTLTTHAPFGLGAHFT 134

Query: 249 VPIEDICCQERRTVAKVQLPLKVRNRMMHYMLDMRGEFKNPLLFDCTAGLLR 94
           VP++ + C   R      LPLKV+ R  +++LD  G F N  LFD T G  R
Sbjct: 135 VPLKQVSCMAHRGEVPAMLPLKVKGRSFYFLLDKTGHFPNTKLFDNTVGAYR 186


>BC008643-1|AAH08643.1|  201|Homo sapiens Similar to RIKEN cDNA
           0610006I08 gene protein.
          Length = 201

 Score =  102 bits (245), Expect = 1e-21
 Identities = 57/172 (33%), Positives = 86/172 (50%)
 Frame = -2

Query: 609 KDVILFKYENPSFYKYMNIFAVVQYAFWMYLGIFAFSTLKDAPVDKSKITEDTPWYRKIN 430
           +DV+LF+++   F+  + +F   Q  FW  + + A S     PV    +  + P     +
Sbjct: 31  RDVLLFEHDRGRFFTILGLFCAGQGVFWASMAVAAVSR---PPVPVQPLDAEVPNRGPFD 87

Query: 429 LGENKYKNTLGTLAVIIGAGSLTMIWMYTLRSVRYLVLHKGGKHVSLVTYAPFGRNRSMK 250
           L    ++  L      IGA  L    +++LRSVR +VL  GG+ V+L T+APFG      
Sbjct: 88  LRSALWRYGLAVGCGAIGALVLGAGLLFSLRSVRSVVLRAGGQQVTLTTHAPFGLGAHFT 147

Query: 249 VPIEDICCQERRTVAKVQLPLKVRNRMMHYMLDMRGEFKNPLLFDCTAGLLR 94
           VP++ + C   R      LPLKV+ R  +++LD  G F N  LFD T G  R
Sbjct: 148 VPLKQVSCMAHRGEVPAMLPLKVKGRRFYFLLDKTGHFPNTKLFDNTVGAYR 199


>AM746210-1|CAN88919.1|  302|Homo sapiens PDHA1/LOC79064 protein
           protein.
          Length = 302

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = -2

Query: 621 TNVAKDVILFKYENPSFYKYMNIFAVVQYAFWMYLGIFAFS 499
           T + +DV+LF+++   F+  + +F   Q  FW  + + A S
Sbjct: 30  TTLQRDVLLFEHDRGRFFTILGLFCAGQGVFWASMAVAAVS 70


>X69943-1|CAA49561.1|  100|Homo sapiens GTP binding protein protein.
          Length = 100

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 24/63 (38%), Positives = 31/63 (49%)
 Frame = -2

Query: 330 RYLVLHKGGKHVSLVTYAPFGRNRSMKVPIEDICCQERRTVAKVQLPLKVRNRMMHYMLD 151
           +Y VL  GG  +  V  AP GR     V  ED+   E R     +LPL VR+R   + L 
Sbjct: 29  QYPVLTHGGL-LPRVRRAPAGRPGGAGVHPEDVSGHEPRQRQDHRLPLHVRHRHEEHPLR 87

Query: 150 MRG 142
           +RG
Sbjct: 88  VRG 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,623,595
Number of Sequences: 237096
Number of extensions: 2522363
Number of successful extensions: 4840
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4835
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)