Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt15d06
         (832 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118499-1|AAM49868.1|  231|Drosophila melanogaster LD08826p pro...   227   1e-59
AE013599-1170|AAF58754.1|  231|Drosophila melanogaster CG12935-P...   227   1e-59

>AY118499-1|AAM49868.1|  231|Drosophila melanogaster LD08826p
           protein.
          Length = 231

 Score =  227 bits (555), Expect = 1e-59
 Identities = 102/180 (56%), Positives = 137/180 (76%)
 Frame = -2

Query: 630 DVNTNVAKDVILFKYENPSFYKYMNIFAVVQYAFWMYLGIFAFSTLKDAPVDKSKITEDT 451
           DVNT+V KD+ILFKYENP FY+ +N F V Q+ FW YL  FAF+TLKDAPV + K  E+ 
Sbjct: 52  DVNTSVPKDIILFKYENPRFYQMLNFFGVCQFVFWTYLSHFAFTTLKDAPVVE-KPGEEL 110

Query: 450 PWYRKINLGENKYKNTLGTLAVIIGAGSLTMIWMYTLRSVRYLVLHKGGKHVSLVTYAPF 271
            W+++INLG+NKY+N +   + +IG G L  +WM+TLRSVR+L+L KGG+ VS VTY PF
Sbjct: 111 KWFQRINLGDNKYRNGITACSFLIGYGILFAVWMFTLRSVRFLILRKGGQSVSFVTYGPF 170

Query: 270 GRNRSMKVPIEDICCQERRTVAKVQLPLKVRNRMMHYMLDMRGEFKNPLLFDCTAGLLRK 91
            RNR M VP++ +  +E R +A+VQLP+KV+ + ++Y+LDMRGEF+N  LFD TAGL R+
Sbjct: 171 NRNRIMTVPLKCVSAEESRNMARVQLPIKVKGKTLYYVLDMRGEFRNGELFDYTAGLKRR 230


>AE013599-1170|AAF58754.1|  231|Drosophila melanogaster CG12935-PA
           protein.
          Length = 231

 Score =  227 bits (555), Expect = 1e-59
 Identities = 102/180 (56%), Positives = 137/180 (76%)
 Frame = -2

Query: 630 DVNTNVAKDVILFKYENPSFYKYMNIFAVVQYAFWMYLGIFAFSTLKDAPVDKSKITEDT 451
           DVNT+V KD+ILFKYENP FY+ +N F V Q+ FW YL  FAF+TLKDAPV + K  E+ 
Sbjct: 52  DVNTSVPKDIILFKYENPRFYQMLNFFGVCQFVFWTYLSHFAFTTLKDAPVVE-KPGEEL 110

Query: 450 PWYRKINLGENKYKNTLGTLAVIIGAGSLTMIWMYTLRSVRYLVLHKGGKHVSLVTYAPF 271
            W+++INLG+NKY+N +   + +IG G L  +WM+TLRSVR+L+L KGG+ VS VTY PF
Sbjct: 111 KWFQRINLGDNKYRNGITACSFLIGYGILFAVWMFTLRSVRFLILRKGGQSVSFVTYGPF 170

Query: 270 GRNRSMKVPIEDICCQERRTVAKVQLPLKVRNRMMHYMLDMRGEFKNPLLFDCTAGLLRK 91
            RNR M VP++ +  +E R +A+VQLP+KV+ + ++Y+LDMRGEF+N  LFD TAGL R+
Sbjct: 171 NRNRIMTVPLKCVSAEESRNMARVQLPIKVKGKTLYYVLDMRGEFRNGELFDYTAGLKRR 230


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,874,715
Number of Sequences: 53049
Number of extensions: 730628
Number of successful extensions: 1506
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)