Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15d04
(829 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-1552|AAF52701.1| 219|Drosophila melanogaster CG9298-PA... 254 1e-67
AE014297-4558|AAF57019.1| 145|Drosophila melanogaster CG1359-PA... 43 6e-04
DQ787107-1|ABH06966.1| 126|Drosophila melanogaster varicose pro... 30 3.4
DQ787106-1|ABH06965.1| 128|Drosophila melanogaster varicose pro... 30 3.4
DQ787105-1|ABH06964.1| 285|Drosophila melanogaster varicose pro... 30 3.4
DQ787104-1|ABH06963.1| 308|Drosophila melanogaster varicose pro... 30 3.4
DQ787103-1|ABH06962.1| 126|Drosophila melanogaster varicose pro... 30 3.4
DQ787102-1|ABH06961.1| 306|Drosophila melanogaster varicose pro... 30 3.4
AY121709-1|AAM52036.1| 548|Drosophila melanogaster RH61449p pro... 30 3.4
AY089616-1|AAL90354.1| 636|Drosophila melanogaster RE31492p pro... 30 3.4
AE014134-3287|AAN11090.2| 469|Drosophila melanogaster CG9326-PC... 30 3.4
AE014134-3286|AAN11089.3| 636|Drosophila melanogaster CG9326-PB... 30 3.4
AE014134-3285|AAF53925.4| 615|Drosophila melanogaster CG9326-PD... 30 3.4
AF264756-1|AAK20948.1| 836|Drosophila melanogaster Mlx interact... 29 7.8
AF264755-1|AAK20947.1| 1062|Drosophila melanogaster Mlx interact... 29 7.8
AF264754-1|AAK20946.1| 1119|Drosophila melanogaster Mlx interact... 29 7.8
AE014134-3382|AAN11113.1| 836|Drosophila melanogaster CG18362-P... 29 7.8
AE014134-3381|AAN11112.1| 925|Drosophila melanogaster CG18362-P... 29 7.8
AE014134-3380|AAF53989.2| 1119|Drosophila melanogaster CG18362-P... 29 7.8
AE014134-3379|AAF53988.2| 1119|Drosophila melanogaster CG18362-P... 29 7.8
AE014134-3378|AAN11111.1| 1070|Drosophila melanogaster CG18362-P... 29 7.8
>AE014134-1552|AAF52701.1| 219|Drosophila melanogaster CG9298-PA
protein.
Length = 219
Score = 254 bits (622), Expect = 1e-67
Identities = 117/173 (67%), Positives = 142/173 (82%)
Frame = -1
Query: 799 KKVVVAFGQRDGINVGHVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFGRVRAT 620
KKV V+F ++DGINVGHVL++VNG PV G T +D RDV ++A ENYP++LKF R + T
Sbjct: 45 KKVSVSFNRKDGINVGHVLVAVNGMPVNGVTLDDGRDVRTTLDAPENYPINLKFSRPKMT 104
Query: 619 TNEKIVLASMFYPLFALASQLSPIPKSSGIESLTADTFKLSCFQTLTGVKFIIVTDTNMQ 440
TNEKI LASMFYPLFA+ASQLSP PKSSGIE L ADTF L CFQTLTG+KFII+++T +
Sbjct: 105 TNEKIFLASMFYPLFAIASQLSPEPKSSGIEILEADTFTLHCFQTLTGIKFIIISETGLN 164
Query: 439 GTDVVLKRIYELYSDYALKNPFYSLEMPIRCELFDTSLHTLLELVEKSGTANL 281
G D++L+++YELYSDY LKNPFYSLEMPIRCELFD L LL VEK+G +N+
Sbjct: 165 GIDLLLRKVYELYSDYVLKNPFYSLEMPIRCELFDNKLQELLAQVEKTGISNI 217
>AE014297-4558|AAF57019.1| 145|Drosophila melanogaster CG1359-PA
protein.
Length = 145
Score = 42.7 bits (96), Expect = 6e-04
Identities = 22/105 (20%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = -1
Query: 592 MFYPLFALASQLSPIPKSSGIESLTADTFKLSCFQTLTGVKFIIVTDTNMQGTDVVLKRI 413
M + + + S++SP G + + L +T +G+KF++ TDT +L+++
Sbjct: 41 MLFSIKSFVSKISPHDPKEGFLYYKTNRYALHYLETPSGLKFVLNTDTTAINVKELLQQL 100
Query: 412 Y-ELYSDYALKNPFYSLEMPIRCELFDTSLHTLLELVEKSGTANL 281
Y +++ ++ +++P ++ + ELF + L + G N+
Sbjct: 101 YAKVWVEFVVRDPLWTPGTVVTSELFQSKLDEFVRQSPIFGIRNI 145
>DQ787107-1|ABH06966.1| 126|Drosophila melanogaster varicose
protein.
Length = 126
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1
Query: 763 INVGHVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFG 635
++VG V+L VNG+PV T D V ++ AKEN L+LK G
Sbjct: 48 LHVGDVILEVNGTPV---RTPDELQV-EVSRAKEN--LTLKIG 84
>DQ787106-1|ABH06965.1| 128|Drosophila melanogaster varicose
protein.
Length = 128
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1
Query: 763 INVGHVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFG 635
++VG V+L VNG+PV T D V ++ AKEN L+LK G
Sbjct: 48 LHVGDVILEVNGTPV---RTPDELQV-EVSRAKEN--LTLKIG 84
>DQ787105-1|ABH06964.1| 285|Drosophila melanogaster varicose
protein.
Length = 285
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1
Query: 763 INVGHVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFG 635
++VG V+L VNG+PV T D V ++ AKEN L+LK G
Sbjct: 215 LHVGDVILEVNGTPV---RTPDELQV-EVSRAKEN--LTLKIG 251
>DQ787104-1|ABH06963.1| 308|Drosophila melanogaster varicose
protein.
Length = 308
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1
Query: 763 INVGHVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFG 635
++VG V+L VNG+PV T D V ++ AKEN L+LK G
Sbjct: 215 LHVGDVILEVNGTPV---RTPDELQV-EVSRAKEN--LTLKIG 251
>DQ787103-1|ABH06962.1| 126|Drosophila melanogaster varicose
protein.
Length = 126
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1
Query: 763 INVGHVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFG 635
++VG V+L VNG+PV T D V ++ AKEN L+LK G
Sbjct: 48 LHVGDVILEVNGTPV---RTPDELQV-EVSRAKEN--LTLKIG 84
>DQ787102-1|ABH06961.1| 306|Drosophila melanogaster varicose
protein.
Length = 306
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1
Query: 763 INVGHVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFG 635
++VG V+L VNG+PV T D V ++ AKEN L+LK G
Sbjct: 215 LHVGDVILEVNGTPV---RTPDELQV-EVSRAKEN--LTLKIG 251
>AY121709-1|AAM52036.1| 548|Drosophila melanogaster RH61449p
protein.
Length = 548
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1
Query: 763 INVGHVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFG 635
++VG V+L VNG+PV T D V ++ AKEN L+LK G
Sbjct: 148 LHVGDVILEVNGTPV---RTPDELQV-EVSRAKEN--LTLKIG 184
>AY089616-1|AAL90354.1| 636|Drosophila melanogaster RE31492p
protein.
Length = 636
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1
Query: 763 INVGHVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFG 635
++VG V+L VNG+PV T D V ++ AKEN L+LK G
Sbjct: 215 LHVGDVILEVNGTPV---RTPDELQV-EVSRAKEN--LTLKIG 251
>AE014134-3287|AAN11090.2| 469|Drosophila melanogaster CG9326-PC,
isoform C protein.
Length = 469
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1
Query: 763 INVGHVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFG 635
++VG V+L VNG+PV T D V ++ AKEN L+LK G
Sbjct: 48 LHVGDVILEVNGTPV---RTPDELQV-EVSRAKEN--LTLKIG 84
>AE014134-3286|AAN11089.3| 636|Drosophila melanogaster CG9326-PB,
isoform B protein.
Length = 636
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1
Query: 763 INVGHVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFG 635
++VG V+L VNG+PV T D V ++ AKEN L+LK G
Sbjct: 215 LHVGDVILEVNGTPV---RTPDELQV-EVSRAKEN--LTLKIG 251
>AE014134-3285|AAF53925.4| 615|Drosophila melanogaster CG9326-PD,
isoform D protein.
Length = 615
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1
Query: 763 INVGHVLLSVNGSPVTGRTTEDNRDVFDIIEAKENYPLSLKFG 635
++VG V+L VNG+PV T D V ++ AKEN L+LK G
Sbjct: 215 LHVGDVILEVNGTPV---RTPDELQV-EVSRAKEN--LTLKIG 251
>AF264756-1|AAK20948.1| 836|Drosophila melanogaster Mlx interactor
gamma protein.
Length = 836
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 751 HVLLSVNGSPVTGRTTEDNRDVFDI 677
H +L NG+PVT + TE R ++DI
Sbjct: 711 HSILPANGAPVTRQGTEHVRQLYDI 735
>AF264755-1|AAK20947.1| 1062|Drosophila melanogaster Mlx interactor
beta protein.
Length = 1062
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 751 HVLLSVNGSPVTGRTTEDNRDVFDI 677
H +L NG+PVT + TE R ++DI
Sbjct: 937 HSILPANGAPVTRQGTEHVRQLYDI 961
>AF264754-1|AAK20946.1| 1119|Drosophila melanogaster Mlx interactor
alpha protein.
Length = 1119
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 751 HVLLSVNGSPVTGRTTEDNRDVFDI 677
H +L NG+PVT + TE R ++DI
Sbjct: 994 HSILPANGAPVTRQGTEHVRQLYDI 1018
>AE014134-3382|AAN11113.1| 836|Drosophila melanogaster CG18362-PD,
isoform D protein.
Length = 836
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 751 HVLLSVNGSPVTGRTTEDNRDVFDI 677
H +L NG+PVT + TE R ++DI
Sbjct: 711 HSILPANGAPVTRQGTEHVRQLYDI 735
>AE014134-3381|AAN11112.1| 925|Drosophila melanogaster CG18362-PE,
isoform E protein.
Length = 925
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 751 HVLLSVNGSPVTGRTTEDNRDVFDI 677
H +L NG+PVT + TE R ++DI
Sbjct: 800 HSILPANGAPVTRQGTEHVRQLYDI 824
>AE014134-3380|AAF53989.2| 1119|Drosophila melanogaster CG18362-PB,
isoform B protein.
Length = 1119
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 751 HVLLSVNGSPVTGRTTEDNRDVFDI 677
H +L NG+PVT + TE R ++DI
Sbjct: 994 HSILPANGAPVTRQGTEHVRQLYDI 1018
>AE014134-3379|AAF53988.2| 1119|Drosophila melanogaster CG18362-PA,
isoform A protein.
Length = 1119
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 751 HVLLSVNGSPVTGRTTEDNRDVFDI 677
H +L NG+PVT + TE R ++DI
Sbjct: 994 HSILPANGAPVTRQGTEHVRQLYDI 1018
>AE014134-3378|AAN11111.1| 1070|Drosophila melanogaster CG18362-PC,
isoform C protein.
Length = 1070
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 751 HVLLSVNGSPVTGRTTEDNRDVFDI 677
H +L NG+PVT + TE R ++DI
Sbjct: 945 HSILPANGAPVTRQGTEHVRQLYDI 969
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,443,870
Number of Sequences: 53049
Number of extensions: 669916
Number of successful extensions: 2256
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2256
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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