Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15d02
(752 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 69 3e-12
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 67 1e-11
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 60 2e-09
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 59 3e-09
04_03_1003 - 21631188-21631274,21631939-21632043,21632171-216322... 33 0.24
06_02_0086 - 11567390-11567634,11568316-11568341,11571082-115712... 31 0.74
05_05_0229 - 23457438-23457629,23457706-23457828,23457913-234580... 31 0.98
07_03_1201 + 24791588-24792619 30 2.3
11_06_0759 + 27008772-27009571,27010457-27010576,27011683-270119... 29 3.0
07_01_0025 - 172742-173260,174559-174621,174701-174763,174852-17... 29 3.0
04_04_0648 - 26936123-26936447,26936540-26936841,26937043-269379... 29 3.0
11_01_0151 - 1263237-1263406,1267405-1267646,1267681-1267781,126... 29 4.0
03_06_0672 + 35443883-35444051,35444151-35444482 29 4.0
02_02_0179 + 7500647-7500779,7503021-7503222,7503356-7503427,750... 29 5.2
02_01_0150 + 1063732-1064214,1064290-1064355,1064721-1064803,106... 29 5.2
12_02_0233 - 16023062-16023253,16023528-16023609,16023699-160238... 28 6.9
08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821 28 6.9
04_04_0261 + 24007790-24009098,24009191-24011118 28 6.9
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340... 28 6.9
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 28 9.2
11_06_0578 + 25176304-25176388,25176503-25177032,25177267-251779... 28 9.2
10_08_0444 + 17971724-17971797,17972119-17972176,17972613-179727... 28 9.2
07_03_0504 - 18842442-18844668,18845418-18845428 28 9.2
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677... 28 9.2
01_06_1147 + 34892415-34893702,34894051-34894676 28 9.2
01_06_0876 - 32654209-32654238,32654357-32654672,32654833-326549... 28 9.2
01_03_0260 - 14323503-14323603,14323751-14323990,14324212-143242... 28 9.2
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 69.3 bits (162), Expect = 3e-12
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Frame = -2
Query: 736 EVSALLGRIPSAVGYQPTLATDMGTMQERITTT--KKGSITSVQAIYVPADDLTDPAPAT 563
EVSA +P GY + TD+ T+ ER +KGSIT + + +P DD+T P P
Sbjct: 296 EVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDL 355
Query: 562 TFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQD 395
T + + R + IYP ++ L S SR+M I +H +V+ +
Sbjct: 356 TGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAI 415
Query: 394 YKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 287
K +Q + A++G + LS ED L + K +R F++Q
Sbjct: 416 GKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQ 452
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 67.3 bits (157), Expect = 1e-11
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Frame = -2
Query: 736 EVSALLGRIPSAVGYQPTLATDMGTMQERITTT--KKGSITSVQAIYVPADDLTDPAPAT 563
EVSA +P GY + TD+ T+ ER + GSIT + + +P DD+T P P
Sbjct: 326 EVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRSGSITQIPILTMPNDDITHPTPDL 385
Query: 562 TFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQD 395
T + + R + IYP ++ L S SR+M I +H +V+ +
Sbjct: 386 TGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAI 445
Query: 394 YKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 287
K +Q + A++G + LS ED L + K +R F++Q
Sbjct: 446 GKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQ 482
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 59.7 bits (138), Expect = 2e-09
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Frame = -2
Query: 748 QAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI-------TTTKKGSITSVQAIYVPAD 590
+A E+S L +P+ GY LA + + ER + + GS+T V A+ P
Sbjct: 362 EALREISGRLAEMPADSGYPAYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGG 421
Query: 589 DLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHY------- 431
D +DP + T + + L + +A+ +P+V+ L S S+ HY
Sbjct: 422 DFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKIPTALEPHYEREDPDF 481
Query: 430 -NVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 287
++ +++LQ L +I+ ++G D L+E DK+T+ A+ ++ +L+Q
Sbjct: 482 IDIRTKAREVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQ 531
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 59.3 bits (137), Expect = 3e-09
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Frame = -2
Query: 748 QAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-------KGSITSVQAIYVPAD 590
+A E+S L +P+ GY LA + + ER K GS+T V A+ P
Sbjct: 376 EALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGSPDRTGSVTIVGAVSPPGG 435
Query: 589 DLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDP-----NIIGAEHYNV 425
D +DP + T + + L + +A+ +P+V+ L S S+ + ++
Sbjct: 436 DFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALESFYEKFDQDFIDI 495
Query: 424 ARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 287
+++LQ L +I+ ++G D L+E DK+T+ A+ ++ +L+Q
Sbjct: 496 RTKAREVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQ 542
>04_03_1003 -
21631188-21631274,21631939-21632043,21632171-21632248,
21632337-21632411,21632908-21632994,21633091-21633158,
21633478-21633565,21633684-21633784,21633831-21633990,
21635088-21635246,21635351-21635527
Length = 394
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 452 IGVHDTGC*VKRIHSWVDTQFSNGSRKYSGSIQVSKSGG---WSRISQVISWYINSL 613
+G HD+G K I W +NGS ++ ++ + G +SR +++W +N+L
Sbjct: 115 LGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGNITFSRFRFLVAWLVNAL 171
>06_02_0086 -
11567390-11567634,11568316-11568341,11571082-11571224,
11571569-11571682,11571855-11572888,11574723-11575047,
11576843-11577124
Length = 722
Score = 31.5 bits (68), Expect = 0.74
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = -2
Query: 718 GRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDL--TDPAPATT-FAH- 551
GR PSA+GY+P A ++ ERI TK+ +A P ++ T ATT F H
Sbjct: 69 GRDPSAMGYRPRRA----SIAERILLTKRKMEEIKEAPVYPTTNVSQTTATRATTVFQHG 124
Query: 550 -LDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYN 428
TT L I+ + +P P I PNI+ N
Sbjct: 125 ASKPTTGLPMNISAVASFPVTTP----PTIPSPNILKQTQLN 162
>05_05_0229 -
23457438-23457629,23457706-23457828,23457913-23458026,
23462062-23462597,23463258-23464545
Length = 750
Score = 31.1 bits (67), Expect = 0.98
Identities = 23/67 (34%), Positives = 29/67 (43%)
Frame = -2
Query: 727 ALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHL 548
A +P TL T + T IT T G V+ + +PA L P P+ T L
Sbjct: 36 AFAASVPHGRKLNWTLTTQVCTSWVGITCTPDGR--RVRELRLPAVGLFGPIPSDTLGKL 93
Query: 547 DATTVLS 527
DA VLS
Sbjct: 94 DALQVLS 100
>07_03_1201 + 24791588-24792619
Length = 343
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Frame = -2
Query: 388 SLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPL--EETIKG 215
S D + +L ++L D R + RF+ +PF AE G +V L E +K
Sbjct: 227 SRPDRVLLLRYEDLLR-DGAAGEHVRAMARFMGRPFSAAEEAAGAVASVVELCSFERMKA 285
Query: 214 FS---KILAGDYDHLPEVAFYMVG 152
+ AG Y +P AF+ G
Sbjct: 286 LEVNRRGTAGSYKSMPRDAFFRKG 309
>11_06_0759 +
27008772-27009571,27010457-27010576,27011683-27011957,
27012516-27013783
Length = 820
Score = 29.5 bits (63), Expect = 3.0
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Frame = +2
Query: 209 GESFDGFLKWY*FTRMSSEHLSYLER------L*EEPLNFTCTCHCQLVFFR*LVHTQNS 370
G +FD + W F + L YLE + P TC V R LVH Q+S
Sbjct: 704 GFTFDCRVPWVTFKEEAMPSLQYLELKLYAGPAGKIPSGITCLPCLTKVILRYLVHYQSS 763
Query: 371 NNVLQGFVVLKNFLNSTCNIVVLSSNNIGVHD 466
+V ++ + N++VLS N G H+
Sbjct: 764 ASVQDTISKMRKESSEHPNMIVLSQN--GEHE 793
>07_01_0025 -
172742-173260,174559-174621,174701-174763,174852-174950,
175792-175818,175946-176251
Length = 358
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/101 (22%), Positives = 45/101 (44%)
Frame = +2
Query: 392 VVLKNFLNSTCNIVVLSSNNIGVHDTGC*VKRIHSWVDTQFSNGSRKYSGSIQVSKSGGW 571
VVL+ + + ++ ++++ H+ ++HS + +S S KY ++ S S
Sbjct: 160 VVLRKMIVQEVKMNLVDTSSVNFHNPIDKKSKVHSKTEPSYSRFSTKYFSTVLSSLSPDQ 219
Query: 572 SRISQVISWYINSLHRCDGTFLGGGNSFLHSTHVSSQSRLI 694
RI + + NSL D ++ S + HV +S I
Sbjct: 220 KRI--IGDYGFNSLLMFDNAYVPNKFSSWIANHVDVKSSQI 258
>04_04_0648 -
26936123-26936447,26936540-26936841,26937043-26937915,
26937995-26938108,26938285-26938612,26938719-26938843,
26938926-26938991,26939099-26939166,26939262-26939343,
26939433-26939546,26939647-26939747,26940429-26940678
Length = 915
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 506 TQFSNGSRKYSGSIQVSKSGGWSRISQVISWYINSLHRCDGTFLGGGNSFLHSTHVSSQS 685
+++S S +SG + ++S S+IS S I RC T GGN L S+ V S S
Sbjct: 476 SRYSVSSPPFSGMLPTNRSDHLSQISNEDSDDICKEVRCIETNETGGNECLESSAVGSNS 535
>11_01_0151 -
1263237-1263406,1267405-1267646,1267681-1267781,
1268010-1268780
Length = 427
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 252 ACPVNTSATWKGCERNL*ILRARATVNLSSSDNSSI 359
A P+ +S TWKG E L +++ R + + DN I
Sbjct: 42 AFPLVSSPTWKGIEHGLELVKQRIIWRVGNGDNIKI 77
>03_06_0672 + 35443883-35444051,35444151-35444482
Length = 166
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2
Query: 427 VARGVQKILQDYKSLQDIIAILGMDELSEEDK 332
VA GVQ++++ KSL I A+ +E EE++
Sbjct: 84 VATGVQRLIKGIKSLSQIFAMYDDEEEDEEER 115
>02_02_0179 +
7500647-7500779,7503021-7503222,7503356-7503427,
7503655-7503726,7504212-7504283,7504711-7504782,
7505045-7505116,7505209-7505280,7505688-7505759,
7506215-7506292,7506670-7506729,7506810-7506848,
7506949-7506998,7507110-7507480,7508467-7508662,
7508856-7508936,7509694-7509848,7510302-7510512,
7510648-7510882,7510995-7511145,7511813-7512181
Length = 944
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -2
Query: 751 TQAGSEVSALLGRIPSAVGYQPTLATDM--GTMQERITTTKKGSITSVQAIYVPADDLTD 578
T + + + G +P +G P L + G E + G+I S++ ++ A+D+T
Sbjct: 134 TNLSLQGNRISGTVPKELGRMPFLKSINLEGNQLEGHIPPEFGNIISLERFFISANDITG 193
Query: 577 PAPATTFAHLDATTVL 530
P +TF+ L T L
Sbjct: 194 ELP-STFSRLTNMTDL 208
>02_01_0150 +
1063732-1064214,1064290-1064355,1064721-1064803,
1065100-1065155,1065247-1066061
Length = 500
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/74 (28%), Positives = 40/74 (54%)
Frame = -2
Query: 412 QKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPL 233
+K+L+ ++Q+ ++ ++ E + A + + R LS F+ ++ AG LVP+
Sbjct: 181 KKMLKHRYAMQEAKHLVCDKNVTVEQSIHTALSSQFVR-LSSYFK--KIHMSGAGNLVPM 237
Query: 232 EETIKGFSKILAGD 191
E +K SKI AG+
Sbjct: 238 EIALKVASKIAAGE 251
>12_02_0233 -
16023062-16023253,16023528-16023609,16023699-16023809,
16023890-16024141,16024227-16024580,16024893-16025548,
16025554-16026459,16026550-16026747
Length = 916
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -2
Query: 688 PTLATD--MGTMQERITTTKKGSITSVQAIYVPADDLTDPAPAT 563
P L TD T + TT S+ SVQ P D +T P P +
Sbjct: 421 PRLFTDGQQPTQSAQQTTNVPSSVGSVQTTPFPVDSITGPTPCS 464
>08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821
Length = 716
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -2
Query: 586 LTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPL--DSTSRIMDPNIIGAEHYNVARGV 413
L + A T LDA+ L +A I + PL D S + PN GAE N+AR +
Sbjct: 514 LLESAEDTALDILDASDELGLFLARAVIDDVLAPLNLDEISGKLPPNCSGAETLNMARSL 573
>04_04_0261 + 24007790-24009098,24009191-24011118
Length = 1078
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Frame = -2
Query: 727 ALLGRIPSAVGYQPTLATDMGTMQERIT-----TTKKGSITSVQAIYVPADDLTDPAPAT 563
A+ G IPS+VG T ++ Q +T +KG+ +++ + + + L+ P PA
Sbjct: 410 AISGEIPSSVG-NLTRLRELDLSQNNLTGPITSINRKGAFLNLEILQLCCNSLSGPVPAF 468
Query: 562 TFA--HLDATTVLSRAIA 515
F+ L+ +++S +A
Sbjct: 469 LFSLPRLEFISLMSNNLA 486
>02_01_0473 -
3403547-3404241,3404455-3404983,3405299-3405477,
3405868-3405952,3406136-3406482,3407061-3407159,
3408135-3408636
Length = 811
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 252 ACPVNTSATWKGCERNL*ILR 314
A P NTS TWKG E L +L+
Sbjct: 440 AFPSNTSPTWKGIEHGLELLK 460
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 509 GYLPSCGSS*LNIPYHGPQYYWS*ALQCCTWSSE 408
GYL S + + G YY AL CCTWSS+
Sbjct: 361 GYLRVFDFSKEQLIFGGKSYYG--ALLCCTWSSD 392
>11_06_0578 +
25176304-25176388,25176503-25177032,25177267-25177997,
25178122-25178172,25178562-25178813,25178894-25179004,
25179102-25179183,25179460-25179489
Length = 623
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 664 TMQERITTTKKGSITSVQAIYVPADDLTDPAPAT 563
T E+ TT S+ SV+ P D +T P P +
Sbjct: 230 TQSEQQTTNVPNSVGSVETTPFPVDSITGPTPCS 263
>10_08_0444 +
17971724-17971797,17972119-17972176,17972613-17972708,
17972974-17973000,17973019-17973075,17973604-17973687,
17974304-17974384,17974928-17975071,17975218-17975309,
17975998-17976079,17976818-17977000,17977360-17977438,
17977555-17977613,17978162-17978290,17979188-17979367,
17980312-17980446,17980528-17980602,17980890-17980947,
17981035-17981282,17981594-17981733,17981961-17982132,
17982797-17982887,17983099-17983221,17984951-17985032,
17985715-17985835,17985886-17985915,17986427-17986549
Length = 940
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 569 WSRISQVISWYINSLHRCDGTFLGGGNSFLH 661
W R V Y+ SL+RCD L S H
Sbjct: 421 WPRFKTVFDMYLQSLYRCDTKLLWVDGSHPH 451
>07_03_0504 - 18842442-18844668,18845418-18845428
Length = 745
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -2
Query: 388 SLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVP 236
S +++++++ MD+ S +TV K+ FL A H+G +P
Sbjct: 310 SARNLVSLVQMDDDSNVSNMTVTIQNKVHEFLQFEAHEASFLEVHSGDDIP 360
>02_02_0099 +
6768115-6768285,6769950-6770034,6770501-6770628,
6771429-6771465,6773108-6774193,6774337-6774447,
6774701-6774817,6774818-6775120,6776092-6776513,
6776645-6777274
Length = 1029
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 220 KGFSKILAGD--YDHLPEVAFYMVGPIEEVVAK 128
KG +++AG + H FYM+ P EEVV K
Sbjct: 163 KGTERLVAGAQLFGHSTRQPFYMIQPSEEVVQK 195
>01_06_1147 + 34892415-34893702,34894051-34894676
Length = 637
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 616 VQAIYVPADDLTDPAPATTFAHLDATTVLS 527
VQ + +PA L P P+ T LDA VLS
Sbjct: 71 VQTLRLPAVGLFGPLPSDTLGKLDALEVLS 100
>01_06_0876 -
32654209-32654238,32654357-32654672,32654833-32654901,
32655238-32655275,32655418-32655478,32655550-32655617,
32655729-32655889,32656687-32656751,32656883-32656956,
32658158-32658245,32658800-32658879,32659168-32659224,
32659332-32659404,32659524-32659762,32659846-32660025,
32660150-32660440
Length = 629
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 721 LGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA 608
LG+I +G QP GT +R TT++ ++ VQA
Sbjct: 251 LGKIGKMLGLQPRSFGFAGTKDKRAVTTQQVTVFKVQA 288
>01_03_0260 - 14323503-14323603,14323751-14323990,14324212-14324275,
14324349-14324654,14324841-14325055,14325551-14325845,
14325965-14326129,14326324-14327352,14333553-14333814,
14334135-14334631,14338714-14340123
Length = 1527
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = -3
Query: 528 LEPLLNWVSTQLWI-----LLTQHPVSWTPILLELSTTMLHVEFRKFFRTTN 388
L P W+S ++I ++ V+W ++L + ML++ FRK++ +T+
Sbjct: 1077 LLPFFVWMSVSMYITVIGVVIMTCQVAWPSVVLVVPLLMLNLWFRKYYISTS 1128
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,349,544
Number of Sequences: 37544
Number of extensions: 443669
Number of successful extensions: 1227
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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