Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15c20
(889 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020570-1|AAH20570.1| 341|Homo sapiens calcium binding protein... 40 0.009
AF151824-1|AAD34061.1| 341|Homo sapiens CGI-66 protein protein. 40 0.009
AF134480-1|AAP97257.1| 341|Homo sapiens MO25-like protein protein. 40 0.009
AF113536-1|AAF14873.1| 341|Homo sapiens MO25 protein protein. 40 0.009
BC010993-1|AAH10993.2| 337|Homo sapiens calcium binding protein... 32 2.4
AL138875-4|CAI10893.1| 337|Homo sapiens calcium binding protein... 32 2.4
AL138875-3|CAI10892.1| 280|Homo sapiens calcium binding protein... 32 2.4
AL136218-3|CAI10816.1| 337|Homo sapiens calcium binding protein... 32 2.4
AL136218-1|CAI10814.1| 280|Homo sapiens calcium binding protein... 32 2.4
AK022639-1|BAB14147.1| 289|Homo sapiens protein ( Homo sapiens ... 32 2.4
>BC020570-1|AAH20570.1| 341|Homo sapiens calcium binding protein 39
protein.
Length = 341
Score = 40.3 bits (90), Expect = 0.009
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = -3
Query: 887 VANPXQXKTNXGYFVRIKTKLVDFLTKFHTDRSEDEQF 774
VANP + + ++ + KL++FL+KF DR+EDEQF
Sbjct: 282 VANPNKTQPILDILLKNQAKLIEFLSKFQNDRTEDEQF 319
Score = 34.7 bits (76), Expect = 0.45
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 877 PXXPKPIXDIL*EXXXXXXXXXXXXXXTVQKTNNFNDEKAYLIKQIKELK 728
P +PI DIL + + FNDEK YL+KQI++LK
Sbjct: 285 PNKTQPILDILLKNQAKLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLK 334
>AF151824-1|AAD34061.1| 341|Homo sapiens CGI-66 protein protein.
Length = 341
Score = 40.3 bits (90), Expect = 0.009
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = -3
Query: 887 VANPXQXKTNXGYFVRIKTKLVDFLTKFHTDRSEDEQF 774
VANP + + ++ + KL++FL+KF DR+EDEQF
Sbjct: 282 VANPNKTQPILDILLKNQAKLIEFLSKFQNDRTEDEQF 319
Score = 34.7 bits (76), Expect = 0.45
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 877 PXXPKPIXDIL*EXXXXXXXXXXXXXXTVQKTNNFNDEKAYLIKQIKELK 728
P +PI DIL + + FNDEK YL+KQI++LK
Sbjct: 285 PNKTQPILDILLKNQAKLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLK 334
>AF134480-1|AAP97257.1| 341|Homo sapiens MO25-like protein protein.
Length = 341
Score = 40.3 bits (90), Expect = 0.009
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = -3
Query: 887 VANPXQXKTNXGYFVRIKTKLVDFLTKFHTDRSEDEQF 774
VANP + + ++ + KL++FL+KF DR+EDEQF
Sbjct: 282 VANPNKTQPILDILLKNQAKLIEFLSKFQNDRTEDEQF 319
Score = 34.7 bits (76), Expect = 0.45
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 877 PXXPKPIXDIL*EXXXXXXXXXXXXXXTVQKTNNFNDEKAYLIKQIKELK 728
P +PI DIL + + FNDEK YL+KQI++LK
Sbjct: 285 PNKTQPILDILLKNQAKLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLK 334
>AF113536-1|AAF14873.1| 341|Homo sapiens MO25 protein protein.
Length = 341
Score = 40.3 bits (90), Expect = 0.009
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = -3
Query: 887 VANPXQXKTNXGYFVRIKTKLVDFLTKFHTDRSEDEQF 774
VANP + + ++ + KL++FL+KF DR+EDEQF
Sbjct: 282 VANPNKTQPILDILLKNQAKLIEFLSKFQNDRTEDEQF 319
Score = 34.7 bits (76), Expect = 0.45
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 877 PXXPKPIXDIL*EXXXXXXXXXXXXXXTVQKTNNFNDEKAYLIKQIKELK 728
P +PI DIL + + FNDEK YL+KQI++LK
Sbjct: 285 PNKTQPILDILLKNQAKLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLK 334
>BC010993-1|AAH10993.2| 337|Homo sapiens calcium binding protein
39-like protein.
Length = 337
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = -3
Query: 887 VANPXQXKTNXGYFVRIKTKLVDFLTKFHTDRSEDEQF 774
VA+P + + ++ + KL++FL+ F +R++DEQF
Sbjct: 281 VASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQF 318
>AL138875-4|CAI10893.1| 337|Homo sapiens calcium binding protein
39-like protein.
Length = 337
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = -3
Query: 887 VANPXQXKTNXGYFVRIKTKLVDFLTKFHTDRSEDEQF 774
VA+P + + ++ + KL++FL+ F +R++DEQF
Sbjct: 281 VASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQF 318
>AL138875-3|CAI10892.1| 280|Homo sapiens calcium binding protein
39-like protein.
Length = 280
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = -3
Query: 887 VANPXQXKTNXGYFVRIKTKLVDFLTKFHTDRSEDEQF 774
VA+P + + ++ + KL++FL+ F +R++DEQF
Sbjct: 224 VASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQF 261
>AL136218-3|CAI10816.1| 337|Homo sapiens calcium binding protein
39-like protein.
Length = 337
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = -3
Query: 887 VANPXQXKTNXGYFVRIKTKLVDFLTKFHTDRSEDEQF 774
VA+P + + ++ + KL++FL+ F +R++DEQF
Sbjct: 281 VASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQF 318
>AL136218-1|CAI10814.1| 280|Homo sapiens calcium binding protein
39-like protein.
Length = 280
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = -3
Query: 887 VANPXQXKTNXGYFVRIKTKLVDFLTKFHTDRSEDEQF 774
VA+P + + ++ + KL++FL+ F +R++DEQF
Sbjct: 224 VASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQF 261
>AK022639-1|BAB14147.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ12577 fis, clone NT2RM4001047, highly similar to
MO25 PROTEIN. ).
Length = 289
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = -3
Query: 887 VANPXQXKTNXGYFVRIKTKLVDFLTKFHTDRSEDEQF 774
VA+P + + ++ + KL++FL+ F +R++DEQF
Sbjct: 233 VASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQF 270
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,359,810
Number of Sequences: 237096
Number of extensions: 2026993
Number of successful extensions: 6075
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6075
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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