Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15c19
(817 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001521-1|AAN71276.1| 297|Drosophila melanogaster LP12034p pro... 159 4e-39
AF132553-1|AAD27852.1| 801|Drosophila melanogaster BcDNA.GM0288... 159 4e-39
AE013599-985|AAF58864.1| 297|Drosophila melanogaster CG2331-PB,... 159 4e-39
AE013599-984|AAF58863.1| 801|Drosophila melanogaster CG2331-PA,... 159 4e-39
AF047037-1|AAC27447.1| 801|Drosophila melanogaster transitional... 158 1e-38
AF202034-1|AAF17568.1| 799|Drosophila melanogaster endoplasmic ... 145 7e-35
AE014298-1473|AAF46608.1| 2090|Drosophila melanogaster CG9817-PA... 32 0.82
AL031583-6|CAA20904.1| 485|Drosophila melanogaster EG:34F3.9 pr... 31 1.9
AE014298-110|AAF45552.1| 493|Drosophila melanogaster CG13359-PA... 31 1.9
AE013599-1427|AAF58547.1| 311|Drosophila melanogaster CG13169-P... 31 1.9
AY089336-1|AAL90074.1| 526|Drosophila melanogaster AT14307p pro... 30 3.3
AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p pro... 29 5.8
AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative mic... 29 5.8
AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA... 29 5.8
M19692-1|AAA28934.1| 1520|Drosophila melanogaster protein ( D.me... 29 7.6
AY058497-1|AAL13726.1| 1249|Drosophila melanogaster LD03455p pro... 29 7.6
AE014296-2776|AAF49431.2| 1620|Drosophila melanogaster CG4032-PA... 29 7.6
>BT001521-1|AAN71276.1| 297|Drosophila melanogaster LP12034p
protein.
Length = 297
Score = 159 bits (386), Expect = 4e-39
Identities = 84/122 (68%), Positives = 89/122 (72%), Gaps = 1/122 (0%)
Frame = -3
Query: 815 LTEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFAR 636
LTEICQRACKLAIRQAIEAEI RE+ R MDMDE+DPVPEI+ AHFEEAMKFAR
Sbjct: 180 LTEICQRACKLAIRQAIEAEIRREKERAENQNS-AMDMDEDDPVPEITSAHFEEAMKFAR 238
Query: 635 RSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP-TNXXXXXXXXXXXGDQPTFQEEGGDDDL 459
RSVSDNDIRKYEMFAQTLQQSRGFG NFRFP + P + GDDDL
Sbjct: 239 RSVSDNDIRKYEMFAQTLQQSRGFGQNFRFPGQTGNTSGSGNNLPVNSP---GDNGDDDL 295
Query: 458 YS 453
YS
Sbjct: 296 YS 297
>AF132553-1|AAD27852.1| 801|Drosophila melanogaster BcDNA.GM02885
protein.
Length = 801
Score = 159 bits (386), Expect = 4e-39
Identities = 84/122 (68%), Positives = 89/122 (72%), Gaps = 1/122 (0%)
Frame = -3
Query: 815 LTEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFAR 636
LTEICQRACKLAIRQAIEAEI RE+ R MDMDE+DPVPEI+ AHFEEAMKFAR
Sbjct: 684 LTEICQRACKLAIRQAIEAEIRREKERAENQNS-AMDMDEDDPVPEITSAHFEEAMKFAR 742
Query: 635 RSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP-TNXXXXXXXXXXXGDQPTFQEEGGDDDL 459
RSVSDNDIRKYEMFAQTLQQSRGFG NFRFP + P + GDDDL
Sbjct: 743 RSVSDNDIRKYEMFAQTLQQSRGFGQNFRFPGQTGNTSGSGNNLPVNSP---GDNGDDDL 799
Query: 458 YS 453
YS
Sbjct: 800 YS 801
>AE013599-985|AAF58864.1| 297|Drosophila melanogaster CG2331-PB,
isoform B protein.
Length = 297
Score = 159 bits (386), Expect = 4e-39
Identities = 84/122 (68%), Positives = 89/122 (72%), Gaps = 1/122 (0%)
Frame = -3
Query: 815 LTEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFAR 636
LTEICQRACKLAIRQAIEAEI RE+ R MDMDE+DPVPEI+ AHFEEAMKFAR
Sbjct: 180 LTEICQRACKLAIRQAIEAEIRREKERAENQNS-AMDMDEDDPVPEITSAHFEEAMKFAR 238
Query: 635 RSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP-TNXXXXXXXXXXXGDQPTFQEEGGDDDL 459
RSVSDNDIRKYEMFAQTLQQSRGFG NFRFP + P + GDDDL
Sbjct: 239 RSVSDNDIRKYEMFAQTLQQSRGFGQNFRFPGQTGNTSGSGNNLPVNSP---GDNGDDDL 295
Query: 458 YS 453
YS
Sbjct: 296 YS 297
>AE013599-984|AAF58863.1| 801|Drosophila melanogaster CG2331-PA,
isoform A protein.
Length = 801
Score = 159 bits (386), Expect = 4e-39
Identities = 84/122 (68%), Positives = 89/122 (72%), Gaps = 1/122 (0%)
Frame = -3
Query: 815 LTEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFAR 636
LTEICQRACKLAIRQAIEAEI RE+ R MDMDE+DPVPEI+ AHFEEAMKFAR
Sbjct: 684 LTEICQRACKLAIRQAIEAEIRREKERAENQNS-AMDMDEDDPVPEITSAHFEEAMKFAR 742
Query: 635 RSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP-TNXXXXXXXXXXXGDQPTFQEEGGDDDL 459
RSVSDNDIRKYEMFAQTLQQSRGFG NFRFP + P + GDDDL
Sbjct: 743 RSVSDNDIRKYEMFAQTLQQSRGFGQNFRFPGQTGNTSGSGNNLPVNSP---GDNGDDDL 799
Query: 458 YS 453
YS
Sbjct: 800 YS 801
>AF047037-1|AAC27447.1| 801|Drosophila melanogaster transitional
endoplasmic reticulumATPase TER94 protein.
Length = 801
Score = 158 bits (383), Expect = 1e-38
Identities = 83/122 (68%), Positives = 89/122 (72%), Gaps = 1/122 (0%)
Frame = -3
Query: 815 LTEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFAR 636
LTEICQRACKLAIRQAIEAEI RE+ R MDMDE+DPVPEI+ AHF+EAMKFAR
Sbjct: 684 LTEICQRACKLAIRQAIEAEIRREKERAENQNS-AMDMDEDDPVPEITSAHFQEAMKFAR 742
Query: 635 RSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP-TNXXXXXXXXXXXGDQPTFQEEGGDDDL 459
RSVSDNDIRKYEMFAQTLQQSRGFG NFRFP + P + GDDDL
Sbjct: 743 RSVSDNDIRKYEMFAQTLQQSRGFGQNFRFPGQTGNTSGSGNNLPVNSP---GDNGDDDL 799
Query: 458 YS 453
YS
Sbjct: 800 YS 801
>AF202034-1|AAF17568.1| 799|Drosophila melanogaster endoplasmic
reticulum membranefusion protein protein.
Length = 799
Score = 145 bits (351), Expect = 7e-35
Identities = 79/122 (64%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Frame = -3
Query: 815 LTEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFAR 636
LTEICQRACKLAIRQAIEAEI RE+ R MD DE+DPVPEI+ AHFEEAMKFAR
Sbjct: 683 LTEICQRACKLAIRQAIEAEIRREKERAENQNS-AMD-DEDDPVPEITSAHFEEAMKFAR 740
Query: 635 RSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP-TNXXXXXXXXXXXGDQPTFQEEGGDDDL 459
RSVSDNDIRKYEMFA +QSRGFG NFRFP + P + GDDDL
Sbjct: 741 RSVSDNDIRKYEMFAPDFEQSRGFGQNFRFPGQTGNTSGSGNNLPVNSP---GDNGDDDL 797
Query: 458 YS 453
YS
Sbjct: 798 YS 799
>AE014298-1473|AAF46608.1| 2090|Drosophila melanogaster CG9817-PA
protein.
Length = 2090
Score = 32.3 bits (70), Expect = 0.82
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -3
Query: 776 RQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSVSDNDIRKYEM 597
++A++ + H+ER R M DEE+ + + A + MKF + + D KYE
Sbjct: 1701 KRAVQEQEHQERQRQNISRHNQMSSDEENSIMPQNSAGQDMRMKFPQSQI-DLMYSKYES 1759
Query: 596 FAQTLQ 579
A L+
Sbjct: 1760 MASNLK 1765
>AL031583-6|CAA20904.1| 485|Drosophila melanogaster EG:34F3.9
protein.
Length = 485
Score = 31.1 bits (67), Expect = 1.9
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Frame = +3
Query: 261 SSRDAAVCL-ELHVRCLRHYRIREPAGARRHVGVVGRHAGQTDRTLVLVYRDGGDAPRS- 434
S+ D A L E+ +RC H+ + G H G + H R L D AP +
Sbjct: 43 SNLDLACSLSEMRIRCPEHFDVATVVGVNSHTGKLITHFNH--RKL----GDVDLAPHAL 96
Query: 435 RARHSLAVQVVVTPLLLERGLVAR*STRAPCSSRVCWESEVGSEAAALLQGLREHLVLAD 614
+R + + ++ +G +A T P V W+S + A L+ +R + LAD
Sbjct: 97 LSRRDKFMDICQKQVMTSQGCLASEGTPIPADLEVTWQSHSIIDCLA-LRKVRAEMNLAD 155
>AE014298-110|AAF45552.1| 493|Drosophila melanogaster CG13359-PA
protein.
Length = 493
Score = 31.1 bits (67), Expect = 1.9
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Frame = +3
Query: 261 SSRDAAVCL-ELHVRCLRHYRIREPAGARRHVGVVGRHAGQTDRTLVLVYRDGGDAPRS- 434
S+ D A L E+ +RC H+ + G H G + H R L D AP +
Sbjct: 43 SNLDLACSLSEMRIRCPEHFDVATVVGVNSHTGKLITHFNH--RKL----GDVDLAPHAL 96
Query: 435 RARHSLAVQVVVTPLLLERGLVAR*STRAPCSSRVCWESEVGSEAAALLQGLREHLVLAD 614
+R + + ++ +G +A T P V W+S + A L+ +R + LAD
Sbjct: 97 LSRRDKFMDICQKQVMTSQGCLASEGTPIPADLEVTWQSHSIIDCLA-LRKVRAEMNLAD 155
>AE013599-1427|AAF58547.1| 311|Drosophila melanogaster CG13169-PA
protein.
Length = 311
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -1
Query: 502 ATSPRSRRRGVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWRLAPAGS- 326
+++P SR R TT+C+A + ++ R R L CR T +W + G+
Sbjct: 197 SSTPSSRCRTTTTSCSANSNVCGRWSSTRRCRRFRNRCLMERANCRTTVSSWNVVSLGNC 256
Query: 325 XXXXXXXXRTCSSKHTAAS 269
TC+S +++S
Sbjct: 257 SSITVNNTGTCTSTFSSSS 275
>AY089336-1|AAL90074.1| 526|Drosophila melanogaster AT14307p
protein.
Length = 526
Score = 30.3 bits (65), Expect = 3.3
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 2/120 (1%)
Frame = +3
Query: 261 SSRDAAVCL-ELHVRCLRHYRIREPAGARRHVGVVGRHAGQTDRTLVLVYRDGGDAPRS- 434
S+ D A L E+ +RC H+ + G H G + H R L D AP
Sbjct: 43 SNLDLACSLSEMRIRCPEHFDVATVVGVNSHTGKLITHFNH--RKL----GDVDLAPHPL 96
Query: 435 RARHSLAVQVVVTPLLLERGLVAR*STRAPCSSRVCWESEVGSEAAALLQGLREHLVLAD 614
+R + + ++ +G +A T P V W+S + A L+ +R + LAD
Sbjct: 97 LSRRDKFMDICQKQVMTSQGCLASEGTPIPADLEVTWQSHSIFDCLA-LRKVRAEMNLAD 155
>AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p
protein.
Length = 572
Score = 29.5 bits (63), Expect = 5.8
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = -3
Query: 815 LTEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFAR 636
+T +C+ A +++R+ I A + E+ R EE +P +S F EAM
Sbjct: 502 ITNVCREASMMSMRRKI-AGLTPEQIRQLAT--------EEVDLP-VSNKDFNEAMSRCN 551
Query: 635 RSVSDNDIRKYEMFAQTLQQS 573
+SVS D+ KYE + + S
Sbjct: 552 KSVSRADLDKYEKWMREFGSS 572
>AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative
microtubule severingprotein katanin p60 subunit protein.
Length = 571
Score = 29.5 bits (63), Expect = 5.8
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = -3
Query: 815 LTEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFAR 636
+T +C+ A +++R+ I A + E+ R EE +P +S F EAM
Sbjct: 501 ITNVCREASMMSMRRKI-AGLTPEQIRQLAT--------EEVDLP-VSNKDFNEAMSRCN 550
Query: 635 RSVSDNDIRKYEMFAQTLQQS 573
+SVS D+ KYE + + S
Sbjct: 551 KSVSRADLDKYEKWMREFGSS 571
>AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA
protein.
Length = 572
Score = 29.5 bits (63), Expect = 5.8
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = -3
Query: 815 LTEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFAR 636
+T +C+ A +++R+ I A + E+ R EE +P +S F EAM
Sbjct: 502 ITNVCREASMMSMRRKI-AGLTPEQIRQLAT--------EEVDLP-VSNKDFNEAMSRCN 551
Query: 635 RSVSDNDIRKYEMFAQTLQQS 573
+SVS D+ KYE + + S
Sbjct: 552 KSVSRADLDKYEKWMREFGSS 572
>M19692-1|AAA28934.1| 1520|Drosophila melanogaster protein (
D.melanogaster tyrosinekinase gene, exons 3 to 10 (with
a region homologous tothe Abelson oncogene). ).
Length = 1520
Score = 29.1 bits (62), Expect = 7.6
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 414 GGDAPRSRARHSLAVQVVVTPLLLERGLVAR*STRAPCSSR 536
GG PRS +HS + TP++ RGL R S R+ S+
Sbjct: 863 GGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQLHSQ 903
>AY058497-1|AAL13726.1| 1249|Drosophila melanogaster LD03455p
protein.
Length = 1249
Score = 29.1 bits (62), Expect = 7.6
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 414 GGDAPRSRARHSLAVQVVVTPLLLERGLVAR*STRAPCSSR 536
GG PRS +HS + TP++ RGL R S R+ S+
Sbjct: 475 GGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQLHSQ 515
>AE014296-2776|AAF49431.2| 1620|Drosophila melanogaster CG4032-PA
protein.
Length = 1620
Score = 29.1 bits (62), Expect = 7.6
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 414 GGDAPRSRARHSLAVQVVVTPLLLERGLVAR*STRAPCSSR 536
GG PRS +HS + TP++ RGL R S R+ S+
Sbjct: 846 GGIGPRSSQQHSSFKRPTGTPVMGNRGLETRQSKRSQLHSQ 886
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,029,856
Number of Sequences: 53049
Number of extensions: 764880
Number of successful extensions: 2585
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2573
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -