Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15c08
(593 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3002|AAM68406.1| 252|Drosophila melanogaster CG13867-P... 204 7e-53
AY071108-1|AAL48730.1| 252|Drosophila melanogaster RE16440p pro... 203 1e-52
BT010317-1|AAQ23635.1| 956|Drosophila melanogaster AT05393p pro... 29 3.6
BT001363-1|AAN71118.1| 538|Drosophila melanogaster AT29936p pro... 29 3.6
AE014296-54|AAN11430.1| 538|Drosophila melanogaster CG17142-PB,... 29 3.6
AE014296-53|AAF47356.2| 956|Drosophila melanogaster CG17142-PA,... 29 3.6
BT022894-1|AAY55310.1| 424|Drosophila melanogaster IP12509p pro... 29 4.8
AY069636-1|AAL39781.1| 317|Drosophila melanogaster LD40415p pro... 29 4.8
AE014134-1236|AAN10624.2| 424|Drosophila melanogaster CG31907-P... 29 4.8
AE014134-973|AAF52289.1| 317|Drosophila melanogaster CG14005-PA... 29 4.8
>AE013599-3002|AAM68406.1| 252|Drosophila melanogaster CG13867-PA
protein.
Length = 252
Score = 204 bits (498), Expect = 7e-53
Identities = 103/202 (50%), Positives = 133/202 (65%), Gaps = 5/202 (2%)
Frame = -2
Query: 592 NYAILSGHLTGLSKILQAEQAASLRSRIVLPLQLSCERDETLAHLTEGRVPACTHDLVPD 413
N+AI+S HLTGL+KIL EQ LR+R VLPL +S +RD+TL ++TEGRVP +HD+VPD
Sbjct: 48 NFAIISSHLTGLTKILAKEQCPPLRNRTVLPLLVSMDRDDTLINITEGRVPVFSHDIVPD 107
Query: 412 LLRTKPEPQAEQRLQQFNHKASTLSYDTAQKHIAQFTKVVSHVWEIISKGREDWEGESMR 233
LRT+P+P EQ++ Q KA+ L+ D A K + Q+ KVVSHV +++SK RE+WE ES
Sbjct: 108 YLRTRPDPITEQKMLQNEQKAANLTNDAAMKQVTQYNKVVSHVLDMVSKAREEWEIESSS 167
Query: 232 STGMQPTHNIADTHALVTAVGTGKGLR-----PGMANMVGQXXXXXXXXXXXXPQLGPAP 68
TG+Q T ++ADT LV AVG GKGL+ PG MV G
Sbjct: 168 RTGIQQTSSMADTQLLVAAVGMGKGLKLTNYGPGPGMMVPPSIRAPSPMGGPAMSPGNVQ 227
Query: 67 STLPKAPSAIKTNIKAANQIHP 2
L KAPSA+KTNIK+ANQ+HP
Sbjct: 228 QQLGKAPSAVKTNIKSANQVHP 249
>AY071108-1|AAL48730.1| 252|Drosophila melanogaster RE16440p
protein.
Length = 252
Score = 203 bits (496), Expect = 1e-52
Identities = 103/202 (50%), Positives = 133/202 (65%), Gaps = 5/202 (2%)
Frame = -2
Query: 592 NYAILSGHLTGLSKILQAEQAASLRSRIVLPLQLSCERDETLAHLTEGRVPACTHDLVPD 413
N+AI+S HLTGL+KIL EQ LR+R VLPL +S +RD+TL ++TEGRVP +HD+VPD
Sbjct: 48 NFAIISSHLTGLTKILAKEQCPPLRNRTVLPLLVSMDRDDTLINITEGRVPVFSHDIVPD 107
Query: 412 LLRTKPEPQAEQRLQQFNHKASTLSYDTAQKHIAQFTKVVSHVWEIISKGREDWEGESMR 233
LRT+P+P EQ++ Q KA+ L+ D A K + Q+ KVVSHV +++SK RE+WE ES
Sbjct: 108 YLRTRPDPITEQKMLQNEQKAANLTNDAAMKQVTQYNKVVSHVPDMVSKAREEWEIESSS 167
Query: 232 STGMQPTHNIADTHALVTAVGTGKGLR-----PGMANMVGQXXXXXXXXXXXXPQLGPAP 68
TG+Q T ++ADT LV AVG GKGL+ PG MV G
Sbjct: 168 RTGIQQTSSMADTQLLVAAVGMGKGLKLTNYGPGPGMMVPPSIRAPSPMGGPAMSPGNVQ 227
Query: 67 STLPKAPSAIKTNIKAANQIHP 2
L KAPSA+KTNIK+ANQ+HP
Sbjct: 228 QQLGKAPSAVKTNIKSANQVHP 249
>BT010317-1|AAQ23635.1| 956|Drosophila melanogaster AT05393p
protein.
Length = 956
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 248 FPVFAAFGYNFPNVTDNFSELSNVFLCCIIA*STSFMI 361
FP+F + F V NF++ ++C ++A SF +
Sbjct: 619 FPIFGVYVQMFTKVAVNFAKFLLAYICLLVAFGLSFAV 656
>BT001363-1|AAN71118.1| 538|Drosophila melanogaster AT29936p
protein.
Length = 538
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 248 FPVFAAFGYNFPNVTDNFSELSNVFLCCIIA*STSFMI 361
FP+F + F V NF++ ++C ++A SF +
Sbjct: 201 FPIFGVYVQMFTKVAVNFAKFLLAYICLLVAFGLSFAV 238
>AE014296-54|AAN11430.1| 538|Drosophila melanogaster CG17142-PB,
isoform B protein.
Length = 538
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 248 FPVFAAFGYNFPNVTDNFSELSNVFLCCIIA*STSFMI 361
FP+F + F V NF++ ++C ++A SF +
Sbjct: 201 FPIFGVYVQMFTKVAVNFAKFLLAYICLLVAFGLSFAV 238
>AE014296-53|AAF47356.2| 956|Drosophila melanogaster CG17142-PA,
isoform A protein.
Length = 956
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 248 FPVFAAFGYNFPNVTDNFSELSNVFLCCIIA*STSFMI 361
FP+F + F V NF++ ++C ++A SF +
Sbjct: 619 FPIFGVYVQMFTKVAVNFAKFLLAYICLLVAFGLSFAV 656
>BT022894-1|AAY55310.1| 424|Drosophila melanogaster IP12509p
protein.
Length = 424
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 329 STETHCSIH*SCQSRLGNYIQRPRRLGRR 243
ST + CS+H CQS + NY ++P R R+
Sbjct: 157 STGSTCSVH-KCQSMVFNYAKKPVRFERQ 184
>AY069636-1|AAL39781.1| 317|Drosophila melanogaster LD40415p
protein.
Length = 317
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -2
Query: 502 PLQLSCERDETLAHLTEGRVPACTHDLVPDLLRTKPEPQAEQRLQQFNHKASTLSYDTAQ 323
P QL ERD +EG LVP +++T+P P +L +K + + A
Sbjct: 136 PAQLKFERD------SEGCTFLDAQPLVPAVVKTEPLPDEHHQLVNIEYKPTVTQLENAA 189
Query: 322 KH 317
H
Sbjct: 190 SH 191
>AE014134-1236|AAN10624.2| 424|Drosophila melanogaster CG31907-PA
protein.
Length = 424
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 329 STETHCSIH*SCQSRLGNYIQRPRRLGRR 243
ST + CS+H CQS + NY ++P R R+
Sbjct: 157 STGSTCSVH-KCQSMVFNYAKKPVRFERQ 184
>AE014134-973|AAF52289.1| 317|Drosophila melanogaster CG14005-PA
protein.
Length = 317
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -2
Query: 502 PLQLSCERDETLAHLTEGRVPACTHDLVPDLLRTKPEPQAEQRLQQFNHKASTLSYDTAQ 323
P QL ERD +EG LVP +++T+P P +L +K + + A
Sbjct: 136 PAQLKFERD------SEGCTFLDAQPLVPAVVKTEPLPDEHHQLVNIEYKPTVTQLENAA 189
Query: 322 KH 317
H
Sbjct: 190 SH 191
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,973,922
Number of Sequences: 53049
Number of extensions: 448646
Number of successful extensions: 1466
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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