Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt15c07
         (602 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2860|ABC66049.1|  135|Drosophila melanogaster CG34045-P...    66   3e-11

>AE013599-2860|ABC66049.1|  135|Drosophila melanogaster CG34045-PA
           protein.
          Length = 135

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
 Frame = -1

Query: 449 CYACSFSSVDSDQSCLTIGNNTNIVECPFTYCTITRQEFIDPIGVIASFTRGCESFPDFL 270
           CY C++    SD SCL   +   ++ C   YC   R E       + SF R C+  P  L
Sbjct: 3   CYVCTYLDGYSDNSCLKNASAVTVLNCTRKYCVTMRVEIRRNSSKVMSFRRDCQDKPLML 62

Query: 269 NHEVTDPTFRTFYRACTNDLCNIGDG-IQSIVGGNLSPYPAYTGI-NLLVPGTGSG 108
                D TFRT++ +C  D CN  DG +++   G+       +GI N ++PG   G
Sbjct: 63  YGNKPDETFRTYFTSCQQDRCNGHDGRVRNSTNGS-----GGSGIHNAIIPGKSPG 113


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,776,730
Number of Sequences: 53049
Number of extensions: 630184
Number of successful extensions: 1383
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1382
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)