Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15b12
(854 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M84739-1|AAA51916.1| 417|Homo sapiens calreticulin protein. 161 2e-39
M32294-1|AAA36582.1| 417|Homo sapiens protein ( Human Ro ribonu... 161 2e-39
CR457070-1|CAG33351.1| 417|Homo sapiens CALR protein. 161 2e-39
BT007448-1|AAP36116.1| 417|Homo sapiens calreticulin protein. 161 2e-39
BC020493-1|AAH20493.1| 417|Homo sapiens calreticulin protein. 161 2e-39
BC007911-1|AAH07911.1| 417|Homo sapiens calreticulin protein. 161 2e-39
BC002500-1|AAH02500.1| 417|Homo sapiens calreticulin protein. 161 2e-39
AY047586-1|AAL13126.1| 417|Homo sapiens calreticulin protein. 161 2e-39
AK223060-1|BAD96780.1| 406|Homo sapiens calreticulin precursor ... 161 2e-39
AD000092-6|AAB51176.1| 417|Homo sapiens calreticulin protein. 161 2e-39
D86322-1|BAA22590.1| 610|Homo sapiens calmegin protein. 93 1e-18
BC028357-1|AAH28357.1| 610|Homo sapiens calmegin protein. 93 1e-18
BC014595-1|AAH14595.1| 384|Homo sapiens calreticulin 3 protein. 88 4e-17
AK058084-1|BAB71655.1| 384|Homo sapiens protein ( Homo sapiens ... 88 4e-17
M94859-1|AAA21749.1| 592|Homo sapiens calnexin protein. 87 8e-17
L18887-1|AAA21013.1| 592|Homo sapiens calnexin protein. 87 8e-17
L10284-1|AAA36125.1| 592|Homo sapiens calnexin protein. 87 8e-17
BC042843-1|AAH42843.1| 592|Homo sapiens calnexin protein. 87 8e-17
BC003552-1|AAH03552.1| 592|Homo sapiens calnexin protein. 87 8e-17
AJ271880-1|CAB72137.1| 592|Homo sapiens calnexin protein. 87 8e-17
M98452-1|AAA35696.1| 356|Homo sapiens calnexin protein. 84 7e-16
AK129990-1|BAC85269.1| 327|Homo sapiens protein ( Homo sapiens ... 40 0.012
AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens ... 33 1.3
BC008872-1|AAH08872.1| 223|Homo sapiens ZNF672 protein protein. 32 2.3
>M84739-1|AAA51916.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 161 bits (392), Expect = 2e-39
Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = -2
Query: 853 DWDDEMDGEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEI 674
DWD+EMDGEWEPP+I NP+YKG W P+QIDNP YKG W+HPEIDNPEY+PD ++Y D
Sbjct: 252 DWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNF 311
Query: 673 CAVGLDLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 539
+GLDLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 312 GVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>M32294-1|AAA36582.1| 417|Homo sapiens protein ( Human Ro
ribonucleoprotein autoantigen (Ro/SS-A), complete cds.
).
Length = 417
Score = 161 bits (392), Expect = 2e-39
Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = -2
Query: 853 DWDDEMDGEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEI 674
DWD+EMDGEWEPP+I NP+YKG W P+QIDNP YKG W+HPEIDNPEY+PD ++Y D
Sbjct: 252 DWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNF 311
Query: 673 CAVGLDLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 539
+GLDLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 312 GVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>CR457070-1|CAG33351.1| 417|Homo sapiens CALR protein.
Length = 417
Score = 161 bits (392), Expect = 2e-39
Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = -2
Query: 853 DWDDEMDGEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEI 674
DWD+EMDGEWEPP+I NP+YKG W P+QIDNP YKG W+HPEIDNPEY+PD ++Y D
Sbjct: 252 DWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNF 311
Query: 673 CAVGLDLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 539
+GLDLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 312 GVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>BT007448-1|AAP36116.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 161 bits (392), Expect = 2e-39
Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = -2
Query: 853 DWDDEMDGEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEI 674
DWD+EMDGEWEPP+I NP+YKG W P+QIDNP YKG W+HPEIDNPEY+PD ++Y D
Sbjct: 252 DWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNF 311
Query: 673 CAVGLDLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 539
+GLDLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 312 GVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>BC020493-1|AAH20493.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 161 bits (392), Expect = 2e-39
Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = -2
Query: 853 DWDDEMDGEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEI 674
DWD+EMDGEWEPP+I NP+YKG W P+QIDNP YKG W+HPEIDNPEY+PD ++Y D
Sbjct: 252 DWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNF 311
Query: 673 CAVGLDLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 539
+GLDLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 312 GVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>BC007911-1|AAH07911.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 161 bits (392), Expect = 2e-39
Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = -2
Query: 853 DWDDEMDGEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEI 674
DWD+EMDGEWEPP+I NP+YKG W P+QIDNP YKG W+HPEIDNPEY+PD ++Y D
Sbjct: 252 DWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNF 311
Query: 673 CAVGLDLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 539
+GLDLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 312 GVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>BC002500-1|AAH02500.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 161 bits (392), Expect = 2e-39
Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = -2
Query: 853 DWDDEMDGEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEI 674
DWD+EMDGEWEPP+I NP+YKG W P+QIDNP YKG W+HPEIDNPEY+PD ++Y D
Sbjct: 252 DWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNF 311
Query: 673 CAVGLDLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 539
+GLDLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 312 GVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>AY047586-1|AAL13126.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 161 bits (392), Expect = 2e-39
Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = -2
Query: 853 DWDDEMDGEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEI 674
DWD+EMDGEWEPP+I NP+YKG W P+QIDNP YKG W+HPEIDNPEY+PD ++Y D
Sbjct: 252 DWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNF 311
Query: 673 CAVGLDLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 539
+GLDLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 312 GVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>AK223060-1|BAD96780.1| 406|Homo sapiens calreticulin precursor
variant protein.
Length = 406
Score = 161 bits (392), Expect = 2e-39
Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = -2
Query: 853 DWDDEMDGEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEI 674
DWD+EMDGEWEPP+I NP+YKG W P+QIDNP YKG W+HPEIDNPEY+PD ++Y D
Sbjct: 241 DWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNF 300
Query: 673 CAVGLDLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 539
+GLDLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 301 GVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 346
>AD000092-6|AAB51176.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 161 bits (392), Expect = 2e-39
Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = -2
Query: 853 DWDDEMDGEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEI 674
DWD+EMDGEWEPP+I NP+YKG W P+QIDNP YKG W+HPEIDNPEY+PD ++Y D
Sbjct: 252 DWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNF 311
Query: 673 CAVGLDLWQVKSGTIFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 539
+GLDLWQVKSGTIFD+FLIT+D A A+E G E + EK+M
Sbjct: 312 GVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQM 357
>D86322-1|BAA22590.1| 610|Homo sapiens calmegin protein.
Length = 610
Score = 93.1 bits (221), Expect = 1e-18
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = -2
Query: 832 GEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDL 653
GEW+PPMIDNP YKGVW P +DNP Y+G W +I NP+Y D + + A+GL+L
Sbjct: 356 GEWKPPMIDNPKYKGVWRPPLVDNPNYQGIWSPRKIPNPDYFEDDHPFLLTSFSALGLEL 415
Query: 652 WQVKSGTIFDDFLITDDPAAA 590
W + S FD+F+I + A
Sbjct: 416 WSMTSDIYFDNFIICSEKEVA 436
>BC028357-1|AAH28357.1| 610|Homo sapiens calmegin protein.
Length = 610
Score = 93.1 bits (221), Expect = 1e-18
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = -2
Query: 832 GEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDL 653
GEW+PPMIDNP YKGVW P +DNP Y+G W +I NP+Y D + + A+GL+L
Sbjct: 356 GEWKPPMIDNPKYKGVWRPPLVDNPNYQGIWSPRKIPNPDYFEDDHPFLLTSFSALGLEL 415
Query: 652 WQVKSGTIFDDFLITDDPAAA 590
W + S FD+F+I + A
Sbjct: 416 WSMTSDIYFDNFIICSEKEVA 436
>BC014595-1|AAH14595.1| 384|Homo sapiens calreticulin 3 protein.
Length = 384
Score = 87.8 bits (208), Expect = 4e-17
Identities = 40/104 (38%), Positives = 63/104 (60%)
Frame = -2
Query: 853 DWDDEMDGEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEI 674
DW+ ++DG+W PM+ P Y+ P+ I +K W+H ++ N +Y +L + + I
Sbjct: 242 DWNGDLDGDWPAPMLQKPPYQDGLKPEGI----HKDVWLHRKMKNTDYLTQYDLSEFENI 297
Query: 673 CAVGLDLWQVKSGTIFDDFLITDDPAAAKERGEVIKKRQEGEKK 542
A+GL+LWQV+SGTIFD+FLITDD A G+ +G ++
Sbjct: 298 GAIGLELWQVRSGTIFDNFLITDDEEYADNFGKATWGETKGPER 341
>AK058084-1|BAB71655.1| 384|Homo sapiens protein ( Homo sapiens
cDNA FLJ25355 fis, clone TST01593. ).
Length = 384
Score = 87.8 bits (208), Expect = 4e-17
Identities = 40/104 (38%), Positives = 63/104 (60%)
Frame = -2
Query: 853 DWDDEMDGEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEI 674
DW+ ++DG+W PM+ P Y+ P+ I +K W+H ++ N +Y +L + + I
Sbjct: 242 DWNGDLDGDWPAPMLQKPPYQDGLKPEGI----HKDVWLHRKMKNTDYLTQYDLSEFENI 297
Query: 673 CAVGLDLWQVKSGTIFDDFLITDDPAAAKERGEVIKKRQEGEKK 542
A+GL+LWQV+SGTIFD+FLITDD A G+ +G ++
Sbjct: 298 GAIGLELWQVRSGTIFDNFLITDDEEYADNFGKATWGETKGPER 341
>M94859-1|AAA21749.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 87.0 bits (206), Expect = 8e-17
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 19/103 (18%)
Frame = -2
Query: 853 DWDDEMDGEWEPP-------------------MIDNPDYKGVWAPKQIDNPAYKGPWVHP 731
DWD++MDGEWE P +IDNP+YKG W P IDNP+Y+G W
Sbjct: 341 DWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPR 400
Query: 730 EIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDD 602
+I NP++ D ++ A+GL+LW + S FD+F+I D
Sbjct: 401 KIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICAD 443
>L18887-1|AAA21013.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 87.0 bits (206), Expect = 8e-17
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 19/103 (18%)
Frame = -2
Query: 853 DWDDEMDGEWEPP-------------------MIDNPDYKGVWAPKQIDNPAYKGPWVHP 731
DWD++MDGEWE P +IDNP+YKG W P IDNP+Y+G W
Sbjct: 341 DWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPR 400
Query: 730 EIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDD 602
+I NP++ D ++ A+GL+LW + S FD+F+I D
Sbjct: 401 KIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICAD 443
>L10284-1|AAA36125.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 87.0 bits (206), Expect = 8e-17
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 19/103 (18%)
Frame = -2
Query: 853 DWDDEMDGEWEPP-------------------MIDNPDYKGVWAPKQIDNPAYKGPWVHP 731
DWD++MDGEWE P +IDNP+YKG W P IDNP+Y+G W
Sbjct: 341 DWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPR 400
Query: 730 EIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDD 602
+I NP++ D ++ A+GL+LW + S FD+F+I D
Sbjct: 401 KIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICAD 443
>BC042843-1|AAH42843.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 87.0 bits (206), Expect = 8e-17
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 19/103 (18%)
Frame = -2
Query: 853 DWDDEMDGEWEPP-------------------MIDNPDYKGVWAPKQIDNPAYKGPWVHP 731
DWD++MDGEWE P +IDNP+YKG W P IDNP+Y+G W
Sbjct: 341 DWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPR 400
Query: 730 EIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDD 602
+I NP++ D ++ A+GL+LW + S FD+F+I D
Sbjct: 401 KIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICAD 443
>BC003552-1|AAH03552.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 87.0 bits (206), Expect = 8e-17
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 19/103 (18%)
Frame = -2
Query: 853 DWDDEMDGEWEPP-------------------MIDNPDYKGVWAPKQIDNPAYKGPWVHP 731
DWD++MDGEWE P +IDNP+YKG W P IDNP+Y+G W
Sbjct: 341 DWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPR 400
Query: 730 EIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDD 602
+I NP++ D ++ A+GL+LW + S FD+F+I D
Sbjct: 401 KIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICAD 443
>AJ271880-1|CAB72137.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 87.0 bits (206), Expect = 8e-17
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 19/103 (18%)
Frame = -2
Query: 853 DWDDEMDGEWEPP-------------------MIDNPDYKGVWAPKQIDNPAYKGPWVHP 731
DWD++MDGEWE P +IDNP+YKG W P IDNP+Y+G W
Sbjct: 341 DWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPR 400
Query: 730 EIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDD 602
+I NP++ D ++ A+GL+LW + S FD+F+I D
Sbjct: 401 KIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICAD 443
>M98452-1|AAA35696.1| 356|Homo sapiens calnexin protein.
Length = 356
Score = 83.8 bits (198), Expect = 7e-16
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 19/103 (18%)
Frame = -2
Query: 853 DWDDEMDGEWEPP-------------------MIDNPDYKGVWAPKQIDNPAYKGPWVHP 731
DWD++MDGEWE P +IDNP+YKG W P IDNP+Y+G W
Sbjct: 105 DWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPR 164
Query: 730 EIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDD 602
+I NP++ D ++ A+GL+LW + FD+F+I D
Sbjct: 165 KIPNPDFFEDLEPFRMTPFSAIGLELWSMTLTFFFDNFIICAD 207
>AK129990-1|BAC85269.1| 327|Homo sapiens protein ( Homo sapiens
cDNA FLJ26480 fis, clone KDN05071, highly similar to
Calnexin precursor. ).
Length = 327
Score = 39.9 bits (89), Expect = 0.012
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = -2
Query: 853 DWDDEMDGEWEPPMIDNPDYK-----GVWAPKQID 764
DWD++MDGEWE P I NP + GVW ID
Sbjct: 277 DWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVID 311
>AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ41637 fis, clone FEBRA1000030, weakly similar
to T-CELL RECEPTOR BETA CHAIN ANA 11. ).
Length = 207
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 4/87 (4%)
Frame = +1
Query: 22 YNNNHNHTKH*GYYIECYCTVKLYIHVPAHGARPITKH*----IITYINSERNPHLHGHQ 189
+ + H HT + I Y + H H + H ++T + H H H
Sbjct: 57 HTHTHTHTLSLYWLISLYIHTHTHTHTHTHAVLYLPTHTHTHAVLTLAYLPIHTHTHTHT 116
Query: 190 YETTDTYLLTHNMSLRIGKIRAKHTHS 270
+ + T L TH +SL HTH+
Sbjct: 117 HTLSCTSLYTHTLSLHWLTCLYTHTHA 143
>BC008872-1|AAH08872.1| 223|Homo sapiens ZNF672 protein protein.
Length = 223
Score = 32.3 bits (70), Expect = 2.3
Identities = 9/34 (26%), Positives = 21/34 (61%)
Frame = -3
Query: 108 CWDVNVKFYCTITFDVVALMFCMIVIVIVPVNLF 7
CW V + C++ F + +FC+++ ++P ++F
Sbjct: 161 CWCVPLMLLCSLVFLIFLPLFCLLLSYLIPAHIF 194
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,598,269
Number of Sequences: 237096
Number of extensions: 2367762
Number of successful extensions: 5435
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5360
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -