Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt15b06
         (864 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ062790-1|AAY56663.1|  364|Drosophila melanogaster unknown prot...   338   7e-93
AY119560-1|AAM50214.1|  364|Drosophila melanogaster GM02605p pro...   338   7e-93
AE014297-4350|AAF56874.1|  364|Drosophila melanogaster CG11899-P...   338   7e-93

>DQ062790-1|AAY56663.1|  364|Drosophila melanogaster unknown
           protein.
          Length = 364

 Score =  338 bits (830), Expect = 7e-93
 Identities = 161/260 (61%), Positives = 193/260 (74%), Gaps = 2/260 (0%)
 Frame = -2

Query: 839 KQPRRRKKYGKVNLVLPPTDKYEDIPDQTKWNLDPNASYVHICTNETIHGVEFDFIPDTK 660
           K  +   +YG VN VLP   KY  +P Q  W LDPNASYV+ C NET+ GVEFDF+P+  
Sbjct: 103 KAAKEAAQYGTVNAVLPKLAKYTTVPRQETWKLDPNASYVYYCDNETVEGVEFDFVPEVP 162

Query: 659 -GVPLIADMSSNIMSKKVDVSKFGVIYAGAQKNIGTSGVALVIVREDLLNQALPTCPSLL 483
            GVPL+ADMSSN +S+  DVSKFGVIYAGAQKNIG +G  ++IVR+DL+ + L   PS+L
Sbjct: 163 AGVPLVADMSSNFLSRPFDVSKFGVIYAGAQKNIGPAGTTVIIVRDDLIGKHLKITPSIL 222

Query: 482 DWTANYKQNSILNTPPMFAIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGF 303
           ++    K NS+LNTPP F IY+MG V +WI+RNGG+ GM++LA  K+ LIY+TI QSNGF
Sbjct: 223 NFEQMDKNNSLLNTPPTFGIYVMGLVFKWIKRNGGVAGMAKLAAAKSKLIYDTINQSNGF 282

Query: 302 YYAPVAKNVRSKMNVPFRIG-CPGDDALEKEFLKGAETLGLIQLKGHRDVGGIRASIYNA 126
           YY PV  NVRS+MNVPFRIG   GDDALEKEFL  AE  G+IQLKGHR VGGIRAS+YNA
Sbjct: 283 YYCPVDVNVRSRMNVPFRIGSASGDDALEKEFLSKAEAEGMIQLKGHRSVGGIRASLYNA 342

Query: 125 VTLEEVQALVQYMEEFYKKH 66
           VTL E Q L   M  FYK +
Sbjct: 343 VTLAETQQLANLMLAFYKNN 362


>AY119560-1|AAM50214.1|  364|Drosophila melanogaster GM02605p
           protein.
          Length = 364

 Score =  338 bits (830), Expect = 7e-93
 Identities = 161/260 (61%), Positives = 193/260 (74%), Gaps = 2/260 (0%)
 Frame = -2

Query: 839 KQPRRRKKYGKVNLVLPPTDKYEDIPDQTKWNLDPNASYVHICTNETIHGVEFDFIPDTK 660
           K  +   +YG VN VLP   KY  +P Q  W LDPNASYV+ C NET+ GVEFDF+P+  
Sbjct: 103 KAAKEAAQYGTVNAVLPKLAKYTTVPRQETWKLDPNASYVYYCDNETVEGVEFDFVPEVP 162

Query: 659 -GVPLIADMSSNIMSKKVDVSKFGVIYAGAQKNIGTSGVALVIVREDLLNQALPTCPSLL 483
            GVPL+ADMSSN +S+  DVSKFGVIYAGAQKNIG +G  ++IVR+DL+ + L   PS+L
Sbjct: 163 AGVPLVADMSSNFLSRPFDVSKFGVIYAGAQKNIGPAGTTVIIVRDDLIGKHLKITPSIL 222

Query: 482 DWTANYKQNSILNTPPMFAIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGF 303
           ++    K NS+LNTPP F IY+MG V +WI+RNGG+ GM++LA  K+ LIY+TI QSNGF
Sbjct: 223 NFEQMDKNNSLLNTPPTFGIYVMGLVFKWIKRNGGVAGMAKLAAAKSKLIYDTINQSNGF 282

Query: 302 YYAPVAKNVRSKMNVPFRIG-CPGDDALEKEFLKGAETLGLIQLKGHRDVGGIRASIYNA 126
           YY PV  NVRS+MNVPFRIG   GDDALEKEFL  AE  G+IQLKGHR VGGIRAS+YNA
Sbjct: 283 YYCPVDVNVRSRMNVPFRIGSASGDDALEKEFLSKAEAEGMIQLKGHRSVGGIRASLYNA 342

Query: 125 VTLEEVQALVQYMEEFYKKH 66
           VTL E Q L   M  FYK +
Sbjct: 343 VTLAETQQLANLMLAFYKNN 362


>AE014297-4350|AAF56874.1|  364|Drosophila melanogaster CG11899-PA
           protein.
          Length = 364

 Score =  338 bits (830), Expect = 7e-93
 Identities = 161/260 (61%), Positives = 193/260 (74%), Gaps = 2/260 (0%)
 Frame = -2

Query: 839 KQPRRRKKYGKVNLVLPPTDKYEDIPDQTKWNLDPNASYVHICTNETIHGVEFDFIPDTK 660
           K  +   +YG VN VLP   KY  +P Q  W LDPNASYV+ C NET+ GVEFDF+P+  
Sbjct: 103 KAAKEAAQYGTVNAVLPKLAKYTTVPRQETWKLDPNASYVYYCDNETVEGVEFDFVPEVP 162

Query: 659 -GVPLIADMSSNIMSKKVDVSKFGVIYAGAQKNIGTSGVALVIVREDLLNQALPTCPSLL 483
            GVPL+ADMSSN +S+  DVSKFGVIYAGAQKNIG +G  ++IVR+DL+ + L   PS+L
Sbjct: 163 AGVPLVADMSSNFLSRPFDVSKFGVIYAGAQKNIGPAGTTVIIVRDDLIGKHLKITPSIL 222

Query: 482 DWTANYKQNSILNTPPMFAIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGF 303
           ++    K NS+LNTPP F IY+MG V +WI+RNGG+ GM++LA  K+ LIY+TI QSNGF
Sbjct: 223 NFEQMDKNNSLLNTPPTFGIYVMGLVFKWIKRNGGVAGMAKLAAAKSKLIYDTINQSNGF 282

Query: 302 YYAPVAKNVRSKMNVPFRIG-CPGDDALEKEFLKGAETLGLIQLKGHRDVGGIRASIYNA 126
           YY PV  NVRS+MNVPFRIG   GDDALEKEFL  AE  G+IQLKGHR VGGIRAS+YNA
Sbjct: 283 YYCPVDVNVRSRMNVPFRIGSASGDDALEKEFLSKAEAEGMIQLKGHRSVGGIRASLYNA 342

Query: 125 VTLEEVQALVQYMEEFYKKH 66
           VTL E Q L   M  FYK +
Sbjct: 343 VTLAETQQLANLMLAFYKNN 362


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,146,222
Number of Sequences: 53049
Number of extensions: 905096
Number of successful extensions: 2152
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2146
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)