Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt15a06
         (807 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001634-1|AAN71389.1|  451|Drosophila melanogaster RE38701p pro...    31   2.5  
AY058715-1|AAL13944.1|  451|Drosophila melanogaster LD45348p pro...    31   2.5  
AE014297-327|AAF51973.2|  648|Drosophila melanogaster CG2179-PB,...    31   2.5  
AE014297-326|AAF51972.2|  783|Drosophila melanogaster CG2179-PA,...    31   2.5  
AE014296-2312|AAN11813.1|  231|Drosophila melanogaster CG32132-P...    29   7.5  

>BT001634-1|AAN71389.1|  451|Drosophila melanogaster RE38701p
           protein.
          Length = 451

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = -2

Query: 800 TRRRSLQQHPRCRLRPFR*KEQT---DXRGQEERSHHKCRKQTHTKQQDELHGVRLPAMA 630
           TRR     + R R R    ++ +   D RG+   S    R ++HT ++  L   +L A A
Sbjct: 326 TRRSRSSSYSRSRSRSHSRRQSSSRRDHRGRHRSSRSNSRSRSHTPKEVILEADKLVASA 385

Query: 629 PRLQR 615
            ++QR
Sbjct: 386 EKIQR 390


>AY058715-1|AAL13944.1|  451|Drosophila melanogaster LD45348p
           protein.
          Length = 451

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = -2

Query: 800 TRRRSLQQHPRCRLRPFR*KEQT---DXRGQEERSHHKCRKQTHTKQQDELHGVRLPAMA 630
           TRR     + R R R    ++ +   D RG+   S    R ++HT ++  L   +L A A
Sbjct: 326 TRRSRSSSYSRSRSRSHSRRQSSSRRDHRGRHRSSRSNSRSRSHTPKEVILEADKLVASA 385

Query: 629 PRLQR 615
            ++QR
Sbjct: 386 EKIQR 390


>AE014297-327|AAF51973.2|  648|Drosophila melanogaster CG2179-PB,
           isoform B protein.
          Length = 648

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = -2

Query: 800 TRRRSLQQHPRCRLRPFR*KEQT---DXRGQEERSHHKCRKQTHTKQQDELHGVRLPAMA 630
           TRR     + R R R    ++ +   D RG+   S    R ++HT ++  L   +L A A
Sbjct: 523 TRRSRSSSYSRSRSRSHSRRQSSSRRDHRGRHRSSRSNSRSRSHTPKEVILEADKLVASA 582

Query: 629 PRLQR 615
            ++QR
Sbjct: 583 EKIQR 587


>AE014297-326|AAF51972.2|  783|Drosophila melanogaster CG2179-PA,
           isoform A protein.
          Length = 783

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = -2

Query: 800 TRRRSLQQHPRCRLRPFR*KEQT---DXRGQEERSHHKCRKQTHTKQQDELHGVRLPAMA 630
           TRR     + R R R    ++ +   D RG+   S    R ++HT ++  L   +L A A
Sbjct: 658 TRRSRSSSYSRSRSRSHSRRQSSSRRDHRGRHRSSRSNSRSRSHTPKEVILEADKLVASA 717

Query: 629 PRLQR 615
            ++QR
Sbjct: 718 EKIQR 722


>AE014296-2312|AAN11813.1|  231|Drosophila melanogaster CG32132-PA
           protein.
          Length = 231

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
 Frame = -2

Query: 803 QTRRRSLQQHPRCRLRPFR*KEQTDXRGQE-------ERSHHKCRKQTHTKQQDELHG 651
           Q +R   QQH R R + FR  EQ + R +E       E+ HH    + H +Q    HG
Sbjct: 139 QLQREQQQQHHRDRQQHFR--EQREQREREYQHEHEHEQHHHHHHHREHHEQHQHQHG 194


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,404,116
Number of Sequences: 53049
Number of extensions: 718138
Number of successful extensions: 2451
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2450
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)