Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt15a04
(457 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein. 126 3e-29
BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28 p... 126 3e-29
BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28 p... 126 3e-29
BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28 p... 126 3e-29
U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28 pro... 125 6e-29
AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28 v... 75 9e-14
AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28 p... 48 1e-05
Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein. 29 7.6
Y00387-1|CAA68457.1| 373|Homo sapiens glutamine synthetase prot... 29 7.6
X59834-1|CAA42495.1| 373|Homo sapiens glutamate--ammonia ligas... 29 7.6
X56958-1|CAA40279.2| 1872|Homo sapiens ankyrin (brank-2) protein. 29 7.6
S70290-1|AAB30693.1| 373|Homo sapiens glutamine synthetase prot... 29 7.6
BX537384-1|CAD97626.1| 373|Homo sapiens hypothetical protein pr... 29 7.6
BC127883-1|AAI27884.1| 258|Homo sapiens GLUL protein protein. 29 7.6
BC051726-1|AAH51726.1| 373|Homo sapiens GLUL protein protein. 29 7.6
BC031964-1|AAH31964.1| 373|Homo sapiens GLUL protein protein. 29 7.6
BC018992-1|AAH18992.1| 373|Homo sapiens glutamate-ammonia ligas... 29 7.6
BC011852-1|AAH11852.1| 373|Homo sapiens glutamate-ammonia ligas... 29 7.6
BC011700-1|AAH11700.1| 373|Homo sapiens glutamate-ammonia ligas... 29 7.6
BC010037-1|AAH10037.1| 373|Homo sapiens glutamate-ammonia ligas... 29 7.6
AY513283-1|AAT08036.1| 233|Homo sapiens proliferation-inducing ... 29 7.6
AY486123-1|AAS57905.1| 373|Homo sapiens glutamine synthetase pr... 29 7.6
AY486122-1|AAS57904.1| 373|Homo sapiens glutamine synthetase pr... 29 7.6
AL161952-1|CAB82304.1| 112|Homo sapiens hypothetical protein pr... 29 7.6
AL139344-1|CAI19842.1| 373|Homo sapiens glutamate-ammonia ligas... 29 7.6
BC014635-1|AAH14635.1| 395|Homo sapiens SH3-domain GRB2-like en... 29 10.0
AL592211-2|CAI12365.1| 404|Homo sapiens SH3-domain GRB2-like en... 29 10.0
AL592211-1|CAI12366.1| 395|Homo sapiens SH3-domain GRB2-like en... 29 10.0
AF257319-1|AAF81226.1| 395|Homo sapiens SH3-containing protein ... 29 10.0
AB058751-1|BAB47477.2| 445|Homo sapiens KIAA1848 protein protein. 29 10.0
>CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein.
Length = 137
Score = 126 bits (305), Expect = 3e-29
Identities = 60/126 (47%), Positives = 84/126 (66%)
Frame = -2
Query: 417 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 238
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 237 GFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAIL 58
G VV K+ RKPA + +R AR +L ++ +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 57 RSQRPI 40
RSQ+P+
Sbjct: 119 RSQKPV 124
>BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 126 bits (305), Expect = 3e-29
Identities = 60/126 (47%), Positives = 84/126 (66%)
Frame = -2
Query: 417 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 238
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 237 GFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAIL 58
G VV K+ RKPA + +R AR +L ++ +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 57 RSQRPI 40
RSQ+P+
Sbjct: 119 RSQKPV 124
>BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 126 bits (305), Expect = 3e-29
Identities = 60/126 (47%), Positives = 84/126 (66%)
Frame = -2
Query: 417 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 238
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 237 GFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAIL 58
G VV K+ RKPA + +R AR +L ++ +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINRNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 57 RSQRPI 40
RSQ+P+
Sbjct: 119 RSQKPV 124
>BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 126 bits (305), Expect = 3e-29
Identities = 60/126 (47%), Positives = 84/126 (66%)
Frame = -2
Query: 417 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 238
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 237 GFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAIL 58
G VV K+ RKPA + +R AR +L ++ +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 57 RSQRPI 40
RSQ+P+
Sbjct: 119 RSQKPV 124
>U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 125 bits (302), Expect = 6e-29
Identities = 59/126 (46%), Positives = 84/126 (66%)
Frame = -2
Query: 417 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 238
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 237 GFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAIL 58
G VV K+ RKPA + +R AR +L ++ +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 57 RSQRPI 40
R+Q+P+
Sbjct: 119 RTQKPV 124
>AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28
variant protein.
Length = 95
Score = 75.4 bits (177), Expect = 9e-14
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -2
Query: 417 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 238
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 9 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 66
Query: 237 GFTVVYKK 214
G VV K+
Sbjct: 67 GVVVVIKR 74
>AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28
protein.
Length = 53
Score = 48.4 bits (110), Expect = 1e-05
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = -2
Query: 180 IRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQRPI 40
+R AR +L ++ +++ N YR DL A +RRASAILRSQ+P+
Sbjct: 4 VRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQKPV 50
>Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein.
Length = 3925
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -1
Query: 385 QQQCIPCEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQESCWCRGEP*QEGIHSS 224
++ C + + ++AV + +E CD PP++ + + S + G P EG SS
Sbjct: 3684 EELCTAQHKQKEEQAVSKESETCDHPPIVSEEDISVGYSTFQDGVPKTEGDSSS 3737
>Y00387-1|CAA68457.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>X59834-1|CAA42495.1| 373|Homo sapiens glutamate--ammonia ligase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>X56958-1|CAA40279.2| 1872|Homo sapiens ankyrin (brank-2) protein.
Length = 1872
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -1
Query: 385 QQQCIPCEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQESCWCRGEP*QEGIHSS 224
++ C + + ++AV + +E CD PP++ + + S + G P EG SS
Sbjct: 1599 EELCTAQHKQKEEQAVSKESETCDHPPIVSEEDISVGYSTFQDGVPKTEGDSSS 1652
>S70290-1|AAB30693.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BX537384-1|CAD97626.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC127883-1|AAI27884.1| 258|Homo sapiens GLUL protein protein.
Length = 258
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 44 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 75
>BC051726-1|AAH51726.1| 373|Homo sapiens GLUL protein protein.
Length = 373
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC031964-1|AAH31964.1| 373|Homo sapiens GLUL protein protein.
Length = 373
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC018992-1|AAH18992.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC011852-1|AAH11852.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC011700-1|AAH11700.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC010037-1|AAH10037.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY513283-1|AAT08036.1| 233|Homo sapiens proliferation-inducing
protein 43 protein.
Length = 233
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY486123-1|AAS57905.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY486122-1|AAS57904.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AL161952-1|CAB82304.1| 112|Homo sapiens hypothetical protein
protein.
Length = 112
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AL139344-1|CAI19842.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 384 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 289
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC014635-1|AAH14635.1| 395|Homo sapiens SH3-domain GRB2-like
endophilin B2 protein.
Length = 395
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 174 RPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 64
R F G +++ K +RLL+ D CKA L++A A
Sbjct: 145 RNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKA 181
>AL592211-2|CAI12365.1| 404|Homo sapiens SH3-domain GRB2-like
endophilin B2 protein.
Length = 404
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 174 RPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 64
R F G +++ K +RLL+ D CKA L++A A
Sbjct: 145 RNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKA 181
>AL592211-1|CAI12366.1| 395|Homo sapiens SH3-domain GRB2-like
endophilin B2 protein.
Length = 395
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 174 RPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 64
R F G +++ K +RLL+ D CKA L++A A
Sbjct: 145 RNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKA 181
>AF257319-1|AAF81226.1| 395|Homo sapiens SH3-containing protein
SH3GLB2 protein.
Length = 395
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 174 RPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 64
R F G +++ K +RLL+ D CKA L++A A
Sbjct: 145 RNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKA 181
>AB058751-1|BAB47477.2| 445|Homo sapiens KIAA1848 protein protein.
Length = 445
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 174 RPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 64
R F G +++ K +RLL+ D CKA L++A A
Sbjct: 186 RNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKA 222
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,737,060
Number of Sequences: 237096
Number of extensions: 1440314
Number of successful extensions: 9914
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9908
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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