Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14p10
(757 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008868-1|AAH08868.1| 463|Homo sapiens NADH dehydrogenase (ubi... 393 e-109
BC001456-1|AAH01456.1| 463|Homo sapiens NADH dehydrogenase (ubi... 393 e-109
BC000170-1|AAH00170.1| 463|Homo sapiens NADH dehydrogenase (ubi... 393 e-109
AL590714-8|CAH72148.1| 463|Homo sapiens NADH dehydrogenase (ubi... 393 e-109
AF050640-1|AAC27453.1| 463|Homo sapiens NADH-ubiquinone oxidore... 393 e-109
AF013160-1|AAC34362.1| 463|Homo sapiens NADH dehydrogenase-ubiq... 393 e-109
AK222618-1|BAD96338.1| 463|Homo sapiens NADH dehydrogenase (ubi... 391 e-108
AF183173-1|AAG13808.1| 28|Homo sapiens NADH-ubiquinone oxidore... 62 2e-09
X69943-1|CAA49561.1| 100|Homo sapiens GTP binding protein protein. 37 0.068
AJ496551-1|CAD43054.1| 90|Homo sapiens MHC class I antigen pro... 33 0.84
BC075858-1|AAH75858.1| 1253|Homo sapiens PLEKHG2 protein protein. 33 1.1
AK024429-1|BAB15719.1| 1430|Homo sapiens FLJ00018 protein protein. 33 1.1
M73999-1|AAB00778.1| 182|Homo sapiens HOX2.8 protein. 33 1.5
AY358755-1|AAQ89115.1| 159|Homo sapiens GRPR5811 protein. 33 1.5
AK097432-1|BAC05050.1| 466|Homo sapiens protein ( Homo sapiens ... 33 1.5
AJ006978-1|CAA07365.1| 182|Homo sapiens B antigen protein. 32 1.9
U07358-1|AAA67343.1| 859|Homo sapiens serine/threonine protein ... 31 3.4
AJ697852-1|CAG26974.1| 90|Homo sapiens MHC class I antigen pro... 31 4.5
AB023207-1|BAA76834.2| 883|Homo sapiens KIAA0990 protein protein. 31 4.5
AY507107-1|AAS87021.1| 1043|Homo sapiens NMDA receptor subunit 3... 31 5.9
AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein. 31 5.9
AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein. 31 5.9
AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein. 31 5.9
AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein. 31 5.9
AF183172-1|AAG13809.1| 38|Homo sapiens NADH-ubiquinone oxidore... 31 5.9
L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein. 30 7.8
BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein. 30 7.8
BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a, sub... 30 7.8
BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a, sub... 30 7.8
AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein. 30 7.8
AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein. 30 7.8
>BC008868-1|AAH08868.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 393 bits (968), Expect = e-109
Identities = 174/223 (78%), Positives = 200/223 (89%)
Frame = -2
Query: 726 GVSLDMPLGLMDDIYEFSSKFAERIDEVEDVLTTNRIWVQRTKDIGVVTAQDALNYGFSG 547
GV D+PLGLMDDIY+FS F+ R+DE+E++LT NRIW RT DIGVVTA++ALNYGFSG
Sbjct: 231 GVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWRNRTIDIGVVTAEEALNYGFSG 290
Query: 546 VMLRGSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRYLCRVEEMRQSLRIIEQCLND 367
VMLRGSGI+WDLRKTQPYD Y VEFDVP+G+ GDCYDRYLCRVEEMRQSLRII QCLN
Sbjct: 291 VMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRYLCRVEEMRQSLRIIAQCLNK 350
Query: 366 MPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQVPPGSTYTAVEAPKGEFGIY 187
MPPGE+K DDAK++PP R EMKTSME+LIHHFKL+T+GYQVPPG+TYTA+EAPKGEFG+Y
Sbjct: 351 MPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVY 410
Query: 186 LVSDGGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAIIGT 58
LVSDG S+PYRCKIKAPGFAHLA L+K+ + MLAD+VAIIGT
Sbjct: 411 LVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGT 453
>BC001456-1|AAH01456.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 393 bits (968), Expect = e-109
Identities = 174/223 (78%), Positives = 200/223 (89%)
Frame = -2
Query: 726 GVSLDMPLGLMDDIYEFSSKFAERIDEVEDVLTTNRIWVQRTKDIGVVTAQDALNYGFSG 547
GV D+PLGLMDDIY+FS F+ R+DE+E++LT NRIW RT DIGVVTA++ALNYGFSG
Sbjct: 231 GVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWRNRTIDIGVVTAEEALNYGFSG 290
Query: 546 VMLRGSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRYLCRVEEMRQSLRIIEQCLND 367
VMLRGSGI+WDLRKTQPYD Y VEFDVP+G+ GDCYDRYLCRVEEMRQSLRII QCLN
Sbjct: 291 VMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRYLCRVEEMRQSLRIIAQCLNK 350
Query: 366 MPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQVPPGSTYTAVEAPKGEFGIY 187
MPPGE+K DDAK++PP R EMKTSME+LIHHFKL+T+GYQVPPG+TYTA+EAPKGEFG+Y
Sbjct: 351 MPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVY 410
Query: 186 LVSDGGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAIIGT 58
LVSDG S+PYRCKIKAPGFAHLA L+K+ + MLAD+VAIIGT
Sbjct: 411 LVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGT 453
>BC000170-1|AAH00170.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 393 bits (968), Expect = e-109
Identities = 174/223 (78%), Positives = 200/223 (89%)
Frame = -2
Query: 726 GVSLDMPLGLMDDIYEFSSKFAERIDEVEDVLTTNRIWVQRTKDIGVVTAQDALNYGFSG 547
GV D+PLGLMDDIY+FS F+ R+DE+E++LT NRIW RT DIGVVTA++ALNYGFSG
Sbjct: 231 GVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWRNRTIDIGVVTAEEALNYGFSG 290
Query: 546 VMLRGSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRYLCRVEEMRQSLRIIEQCLND 367
VMLRGSGI+WDLRKTQPYD Y VEFDVP+G+ GDCYDRYLCRVEEMRQSLRII QCLN
Sbjct: 291 VMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRYLCRVEEMRQSLRIIAQCLNK 350
Query: 366 MPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQVPPGSTYTAVEAPKGEFGIY 187
MPPGE+K DDAK++PP R EMKTSME+LIHHFKL+T+GYQVPPG+TYTA+EAPKGEFG+Y
Sbjct: 351 MPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVY 410
Query: 186 LVSDGGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAIIGT 58
LVSDG S+PYRCKIKAPGFAHLA L+K+ + MLAD+VAIIGT
Sbjct: 411 LVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGT 453
>AL590714-8|CAH72148.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 393 bits (968), Expect = e-109
Identities = 174/223 (78%), Positives = 200/223 (89%)
Frame = -2
Query: 726 GVSLDMPLGLMDDIYEFSSKFAERIDEVEDVLTTNRIWVQRTKDIGVVTAQDALNYGFSG 547
GV D+PLGLMDDIY+FS F+ R+DE+E++LT NRIW RT DIGVVTA++ALNYGFSG
Sbjct: 231 GVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWRNRTIDIGVVTAEEALNYGFSG 290
Query: 546 VMLRGSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRYLCRVEEMRQSLRIIEQCLND 367
VMLRGSGI+WDLRKTQPYD Y VEFDVP+G+ GDCYDRYLCRVEEMRQSLRII QCLN
Sbjct: 291 VMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRYLCRVEEMRQSLRIIAQCLNK 350
Query: 366 MPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQVPPGSTYTAVEAPKGEFGIY 187
MPPGE+K DDAK++PP R EMKTSME+LIHHFKL+T+GYQVPPG+TYTA+EAPKGEFG+Y
Sbjct: 351 MPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVY 410
Query: 186 LVSDGGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAIIGT 58
LVSDG S+PYRCKIKAPGFAHLA L+K+ + MLAD+VAIIGT
Sbjct: 411 LVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGT 453
>AF050640-1|AAC27453.1| 463|Homo sapiens NADH-ubiquinone
oxidoreductase NDUFS2 subunit protein.
Length = 463
Score = 393 bits (968), Expect = e-109
Identities = 174/223 (78%), Positives = 200/223 (89%)
Frame = -2
Query: 726 GVSLDMPLGLMDDIYEFSSKFAERIDEVEDVLTTNRIWVQRTKDIGVVTAQDALNYGFSG 547
GV D+PLGLMDDIY+FS F+ R+DE+E++LT NRIW RT DIGVVTA++ALNYGFSG
Sbjct: 231 GVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWRNRTIDIGVVTAEEALNYGFSG 290
Query: 546 VMLRGSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRYLCRVEEMRQSLRIIEQCLND 367
VMLRGSGI+WDLRKTQPYD Y VEFDVP+G+ GDCYDRYLCRVEEMRQSLRII QCLN
Sbjct: 291 VMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRYLCRVEEMRQSLRIIAQCLNK 350
Query: 366 MPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQVPPGSTYTAVEAPKGEFGIY 187
MPPGE+K DDAK++PP R EMKTSME+LIHHFKL+T+GYQVPPG+TYTA+EAPKGEFG+Y
Sbjct: 351 MPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVY 410
Query: 186 LVSDGGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAIIGT 58
LVSDG S+PYRCKIKAPGFAHLA L+K+ + MLAD+VAIIGT
Sbjct: 411 LVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGT 453
>AF013160-1|AAC34362.1| 463|Homo sapiens NADH
dehydrogenase-ubiquinone Fe-S protein 2 precursor
protein.
Length = 463
Score = 393 bits (968), Expect = e-109
Identities = 174/223 (78%), Positives = 200/223 (89%)
Frame = -2
Query: 726 GVSLDMPLGLMDDIYEFSSKFAERIDEVEDVLTTNRIWVQRTKDIGVVTAQDALNYGFSG 547
GV D+PLGLMDDIY+FS F+ R+DE+E++LT NRIW RT DIGVVTA++ALNYGFSG
Sbjct: 231 GVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWRNRTIDIGVVTAEEALNYGFSG 290
Query: 546 VMLRGSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRYLCRVEEMRQSLRIIEQCLND 367
VMLRGSGI+WDLRKTQPYD Y VEFDVP+G+ GDCYDRYLCRVEEMRQSLRII QCLN
Sbjct: 291 VMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRYLCRVEEMRQSLRIIAQCLNK 350
Query: 366 MPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQVPPGSTYTAVEAPKGEFGIY 187
MPPGE+K DDAK++PP R EMKTSME+LIHHFKL+T+GYQVPPG+TYTA+EAPKGEFG+Y
Sbjct: 351 MPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVY 410
Query: 186 LVSDGGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAIIGT 58
LVSDG S+PYRCKIKAPGFAHLA L+K+ + MLAD+VAIIGT
Sbjct: 411 LVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGT 453
>AK222618-1|BAD96338.1| 463|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q
reductas protein.
Length = 463
Score = 391 bits (962), Expect = e-108
Identities = 173/223 (77%), Positives = 199/223 (89%)
Frame = -2
Query: 726 GVSLDMPLGLMDDIYEFSSKFAERIDEVEDVLTTNRIWVQRTKDIGVVTAQDALNYGFSG 547
GV D+PLGLMDDIY+FS F+ R+DE+E++LT NRIW RT DIGVVTA++ALNYGFSG
Sbjct: 231 GVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWRNRTIDIGVVTAEEALNYGFSG 290
Query: 546 VMLRGSGIKWDLRKTQPYDAYPFVEFDVPIGTHGDCYDRYLCRVEEMRQSLRIIEQCLND 367
VMLRGSGI+WDLRKTQPYD Y VEFDVP+G+ GDCYDRYLCRVEEMRQSLRII QCLN
Sbjct: 291 VMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRYLCRVEEMRQSLRIIAQCLNK 350
Query: 366 MPPGEVKTDDAKLTPPSREEMKTSMEALIHHFKLFTQGYQVPPGSTYTAVEAPKGEFGIY 187
MPPGE+K DDAK++PP R EMKTSME+LIHHFKL+T+GYQVPPG+TYTA+EAPKGEFG+Y
Sbjct: 351 MPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVY 410
Query: 186 LVSDGGSKPYRCKIKAPGFAHLAALEKIGRNSMLADIVAIIGT 58
LVSDG S+PYRCKIKAPGFAH A L+K+ + MLAD+VAIIGT
Sbjct: 411 LVSDGSSRPYRCKIKAPGFAHQAGLDKMSKGHMLADVVAIIGT 453
>AF183173-1|AAG13808.1| 28|Homo sapiens NADH-ubiquinone
oxidoreductase NDUFS2 subunit protein.
Length = 28
Score = 62.1 bits (144), Expect = 2e-09
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -2
Query: 204 GEFGIYLVSDGGSKPYRCKIKAPGFAHL 121
GEFG+YLVSDG S+PYRCKIKAPGFAHL
Sbjct: 1 GEFGVYLVSDGSSRPYRCKIKAPGFAHL 28
>X69943-1|CAA49561.1| 100|Homo sapiens GTP binding protein protein.
Length = 100
Score = 37.1 bits (82), Expect = 0.068
Identities = 29/77 (37%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = -1
Query: 403 PVPPHHRAVPQRHAPRGGQDRRRQAHPALPGGDEDV--HGGADPPLQAVHAGLPGAAGLH 230
PVP HHR PR +Q PA GG V HGG P ++ AG PG AG+H
Sbjct: 1 PVPDHHRLPLVPELPR--HHLPQQEGPA--GGQYPVLTHGGLLPRVRRAPAGRPGGAGVH 56
Query: 229 LHRRGGSQGGVRDLPRL 179
G + R RL
Sbjct: 57 PEDVSGHEPRQRQDHRL 73
>AJ496551-1|CAD43054.1| 90|Homo sapiens MHC class I antigen
protein.
Length = 90
Score = 33.5 bits (73), Expect = 0.84
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = -1
Query: 397 PPHHRAVPQRHAPRGGQDRRRQAHPALPG-----GDEDVHGGADPPLQAVHAGLP 248
P HHR + RH R + RR ++ PG G V G D LQ H LP
Sbjct: 20 PLHHRGLRGRHPVREVRQRRHESEDGAPGAMDRAGGAGVLGPGDTDLQDQHTDLP 74
>BC075858-1|AAH75858.1| 1253|Homo sapiens PLEKHG2 protein protein.
Length = 1253
Score = 33.1 bits (72), Expect = 1.1
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = -2
Query: 696 MDDIYEFSSKFAERIDEVEDVLTTNRIWVQRTKDIGVVTAQDALNYGFSGVMLR 535
++DIYEFSS+ E ++ +VQR++D + T +NY S +LR
Sbjct: 48 IEDIYEFSSELLEDLENSSSAGGIAECFVQRSEDFDIYTLY-CMNYPSSLALLR 100
>AK024429-1|BAB15719.1| 1430|Homo sapiens FLJ00018 protein protein.
Length = 1430
Score = 33.1 bits (72), Expect = 1.1
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = -2
Query: 696 MDDIYEFSSKFAERIDEVEDVLTTNRIWVQRTKDIGVVTAQDALNYGFSGVMLR 535
++DIYEFSS+ E ++ +VQR++D + T +NY S +LR
Sbjct: 196 IEDIYEFSSELLEDLENSSSAGGIAECFVQRSEDFDIYTLY-CMNYPSSLALLR 248
>M73999-1|AAB00778.1| 182|Homo sapiens HOX2.8 protein.
Length = 182
Score = 32.7 bits (71), Expect = 1.5
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -1
Query: 325 PALPGGDEDVHGGADPPLQAVHA-GLPGAAGLHLHRRGGSQGGV-RDLPRLRRRLQA 161
PA PG ED+ A+ P A A L G G L GG GG+ R P R L+A
Sbjct: 126 PACPGALEDICDPAEEPAPARAAPALAGGVGSLLSPAGGGAGGLKRGPPAFSRSLRA 182
>AY358755-1|AAQ89115.1| 159|Homo sapiens GRPR5811 protein.
Length = 159
Score = 32.7 bits (71), Expect = 1.5
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = -1
Query: 325 PALPGGDEDVHG--GADPPLQAVHAGLPGAAGLHLHRRGGSQGGVRDLPRLRRRLQAVQM 152
P+ PG V G G P + G P A H+ G + RDL + Q V
Sbjct: 43 PSCPGPPVQVTGVVGPGPSVPGHLCGRPRALLYHVTVEGLALEEGRDLALVGAGFQGVAC 102
Query: 151 QDQGAGLRAPGG 116
Q +GAG PGG
Sbjct: 103 QQEGAGGMGPGG 114
>AK097432-1|BAC05050.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ40113 fis, clone TESTI2008621. ).
Length = 466
Score = 32.7 bits (71), Expect = 1.5
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 604 PLHPDPVGG-EHVLHLVDALGELRRELVNVVHQTQRHVKRNPLLV*CRRR 750
PL P+P G V L D LR+EL +V Q Q V+ N +L RR
Sbjct: 147 PLAPEPPAGPSKVEQLQDETNHLRKELESVGRQLQAEVENNQMLSLLNRR 196
>AJ006978-1|CAA07365.1| 182|Homo sapiens B antigen protein.
Length = 182
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = -1
Query: 397 PPHHRAVPQRHAPRGGQDRRRQAHPALPG-----GDEDVHGGADPPLQAVHAGLP 248
P HHR + RHA R + RR ++ G G V G D LQ H LP
Sbjct: 20 PLHHRGLRGRHAVREVRQRRHESEEGAAGAMDRAGGAGVLGPGDTDLQDQHTDLP 74
>U07358-1|AAA67343.1| 859|Homo sapiens serine/threonine protein
kinase protein.
Length = 859
Score = 31.5 bits (68), Expect = 3.4
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = -1
Query: 385 RAVPQRHAPRGGQDRRRQAHPALPGGDEDVHGGADPPLQAVHAGLPGAA--GLHLHRRGG 212
R VPQ +P + +A LP D + G P PG + G HR+
Sbjct: 493 RNVPQNLSPHSQRPDILKAESLLPKLDAALSGVGLPGCPKAPPS-PGRSRRGKTRHRKAS 551
Query: 211 SQGGVRDLPRLRRRLQAVQMQDQGAGLRAPGGAG 110
++G DLP LR AV + G G +PGG G
Sbjct: 552 AKGSCGDLPGLR---TAVPPHEPG-GPGSPGGLG 581
>AJ697852-1|CAG26974.1| 90|Homo sapiens MHC class I antigen
protein.
Length = 90
Score = 31.1 bits (67), Expect = 4.5
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = -1
Query: 397 PPHHRAVPQRHAPRGGQDRRRQAHPALPG-----GDEDVHGGADPPLQAVHAGLP 248
P HHR + RHA R + RR ++ G G V G D LQ H LP
Sbjct: 20 PLHHRGLRGRHAVREVRQRRHESEEGAAGAMDRAGGALVLGPGDTDLQDQHTDLP 74
>AB023207-1|BAA76834.2| 883|Homo sapiens KIAA0990 protein protein.
Length = 883
Score = 31.1 bits (67), Expect = 4.5
Identities = 30/89 (33%), Positives = 34/89 (38%)
Frame = -1
Query: 385 RAVPQRHAPRGGQDRRRQAHPALPGGDEDVHGGADPPLQAVHAGLPGAAGLHLHRRGGSQ 206
R P+R G RRR A L G D GG GL L RG
Sbjct: 1 RRRPRRRGRACGTKRRRGACGRL--GGRDGRGGPAAAAALPGPGLAALGRAGLRGRGQRA 58
Query: 205 GGVRDLPRLRRRLQAVQMQDQGAGLRAPG 119
G R L R RRR + + GAG+ A G
Sbjct: 59 EGARGLRRRRRRRRRPGGR-SGAGMAARG 86
>AY507107-1|AAS87021.1| 1043|Homo sapiens NMDA receptor subunit 3B
protein.
Length = 1043
Score = 30.7 bits (66), Expect = 5.9
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = -1
Query: 343 RRRQAHPALPGGDEDVHGGADPPLQAVHAGL-PGAAGLHLHRRGGSQGGVRDLPRLRRRL 167
R R+ A+P G + G PP AGL PG L + R + + D+ +L R
Sbjct: 244 RARRVLEAVPPGPHWLLGTPLPPKALPTAGLPPGLLALGVVARPPLEAAIHDIVQLVARA 303
Query: 166 --QAVQMQDQGAGLRAPGGAGE 107
A Q+Q + A L AP G+
Sbjct: 304 LGSAAQVQPKRALLPAPVNCGD 325
>AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 5.9
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = -1
Query: 382 AVPQRHAPRGGQDRR--RQAHPALP---GGDEDVHGGADPPLQAVHAGLPGAAGLHLHRR 218
A QR G QD + R A AL GG ED G D ++A G G L H +
Sbjct: 136 AAQQRDCTMGNQDGKLKRSAGDALHEGGGGAEDALGPRD--VEATKKGSGGKKALGKHGK 193
Query: 217 GGSQGG 200
GG GG
Sbjct: 194 GGGGGG 199
>AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 5.9
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = -1
Query: 382 AVPQRHAPRGGQDRR--RQAHPALP---GGDEDVHGGADPPLQAVHAGLPGAAGLHLHRR 218
A QR G QD + R A AL GG ED G D ++A G G L H +
Sbjct: 136 AAQQRDCTMGNQDGKLKRSAGDALHEGGGGAEDALGPRD--VEATKKGSGGKKALGKHGK 193
Query: 217 GGSQGG 200
GG GG
Sbjct: 194 GGGGGG 199
>AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 5.9
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = -1
Query: 382 AVPQRHAPRGGQDRR--RQAHPALP---GGDEDVHGGADPPLQAVHAGLPGAAGLHLHRR 218
A QR G QD + R A AL GG ED G D ++A G G L H +
Sbjct: 136 AAQQRDCTMGNQDGKLKRSAGDALHEGGGGAEDALGPRD--VEATKKGSGGKKALGKHGK 193
Query: 217 GGSQGG 200
GG GG
Sbjct: 194 GGGGGG 199
>AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 30.7 bits (66), Expect = 5.9
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = -1
Query: 382 AVPQRHAPRGGQDRR--RQAHPALP---GGDEDVHGGADPPLQAVHAGLPGAAGLHLHRR 218
A QR G QD + R A AL GG ED G D ++A G G L H +
Sbjct: 136 AAQQRDCTMGNQDGKLKRSAGDALHEGGGGAEDALGPRD--VEATKKGSGGKKALGKHGK 193
Query: 217 GGSQGG 200
GG GG
Sbjct: 194 GGGGGG 199
>AF183172-1|AAG13809.1| 38|Homo sapiens NADH-ubiquinone
oxidoreductase NDUFS2 subunit protein.
Length = 38
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2
Query: 726 GVSLDMPLGLMDDIYE 679
GV D+PLGLMDDIY+
Sbjct: 23 GVHQDLPLGLMDDIYQ 38
>L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein.
Length = 464
Score = 30.3 bits (65), Expect = 7.8
Identities = 26/95 (27%), Positives = 29/95 (30%)
Frame = -1
Query: 403 PVPPHHRAVPQRHAPRGGQDRRRQAHPALPGGDEDVHGGADPPLQAVHAGLPGAAGLHLH 224
P P H P H P G HP PG G PP VH PG
Sbjct: 332 PAPGVHPPAPGVHPPAPG------VHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPA 385
Query: 223 RRGGSQGGVRDLPRLRRRLQAVQMQDQGAGLRAPG 119
+ G P + + V Q G APG
Sbjct: 386 VHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPG 420
>BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein.
Length = 481
Score = 30.3 bits (65), Expect = 7.8
Identities = 26/95 (27%), Positives = 29/95 (30%)
Frame = -1
Query: 403 PVPPHHRAVPQRHAPRGGQDRRRQAHPALPGGDEDVHGGADPPLQAVHAGLPGAAGLHLH 224
P P H P H P G HP PG G PP VH PG
Sbjct: 332 PAPGVHPPAPGVHPPAPG------VHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPA 385
Query: 223 RRGGSQGGVRDLPRLRRRLQAVQMQDQGAGLRAPG 119
+ G P + + V Q G APG
Sbjct: 386 VHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPG 420
>BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 30.3 bits (65), Expect = 7.8
Identities = 26/95 (27%), Positives = 29/95 (30%)
Frame = -1
Query: 403 PVPPHHRAVPQRHAPRGGQDRRRQAHPALPGGDEDVHGGADPPLQAVHAGLPGAAGLHLH 224
P P H P H P G HP PG G PP VH PG
Sbjct: 332 PAPGVHPPAPGVHPPAPG------VHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPA 385
Query: 223 RRGGSQGGVRDLPRLRRRLQAVQMQDQGAGLRAPG 119
+ G P + + V Q G APG
Sbjct: 386 VHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPG 420
>BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 30.3 bits (65), Expect = 7.8
Identities = 26/95 (27%), Positives = 29/95 (30%)
Frame = -1
Query: 403 PVPPHHRAVPQRHAPRGGQDRRRQAHPALPGGDEDVHGGADPPLQAVHAGLPGAAGLHLH 224
P P H P H P G HP PG G PP VH PG
Sbjct: 332 PAPGVHPPAPGVHPPAPG------VHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPA 385
Query: 223 RRGGSQGGVRDLPRLRRRLQAVQMQDQGAGLRAPG 119
+ G P + + V Q G APG
Sbjct: 386 VHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPG 420
>AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein.
Length = 1619
Score = 30.3 bits (65), Expect = 7.8
Identities = 25/71 (35%), Positives = 28/71 (39%)
Frame = -1
Query: 403 PVPPHHRAVPQRHAPRGGQDRRRQAHPALPGGDEDVHGGADPPLQAVHAGLPGAAGLHLH 224
P PP PQ A GGQ R +AHP+ G E + P A A L G A L
Sbjct: 4 PAPPSSLPAPQGKAGPGGQ-RAVRAHPSRAGPAE--RAASVPLTMAAAALLLGLALLAPR 60
Query: 223 RRGGSQGGVRD 191
G G D
Sbjct: 61 AAGAGMGACYD 71
>AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein.
Length = 464
Score = 30.3 bits (65), Expect = 7.8
Identities = 26/95 (27%), Positives = 29/95 (30%)
Frame = -1
Query: 403 PVPPHHRAVPQRHAPRGGQDRRRQAHPALPGGDEDVHGGADPPLQAVHAGLPGAAGLHLH 224
P P H P H P G HP PG G PP VH PG
Sbjct: 332 PAPGVHPPAPGVHPPAPG------VHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPA 385
Query: 223 RRGGSQGGVRDLPRLRRRLQAVQMQDQGAGLRAPG 119
+ G P + + V Q G APG
Sbjct: 386 VHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPG 420
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,726,221
Number of Sequences: 237096
Number of extensions: 2512349
Number of successful extensions: 19217
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 16180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19181
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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