Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt14o21
         (677 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047457-1|AAH47457.1|  798|Homo sapiens germ cell associated 2 ...   104   3e-22
AF289865-1|AAK30300.1|  798|Homo sapiens haploid germ cell-speci...   104   3e-22
AB039834-1|BAB21938.3|  798|Homo sapiens H-Haspin protein.            104   3e-22
BC016626-1|AAH16626.1|  773|Homo sapiens Unknown (protein for IM...    93   6e-19

>BC047457-1|AAH47457.1|  798|Homo sapiens germ cell associated 2
            (haspin) protein.
          Length = 798

 Score =  104 bits (249), Expect = 3e-22
 Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
 Frame = -3

Query: 612  FVLRGRRHCTPRCGVAATIIDYSLSRVSLPASAPARCAALYNDLADDDGLFDAVGDYQFE 433
            + L G+    P CG+  +IIDY+LSR+            ++ D++ D+ LF   GDYQF+
Sbjct: 667  YTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDEDLFTGDGDYQFD 720

Query: 432  VYRLMKSKLGNDWKNFEPYTNILWLHYTVDKMITALRYK-RTNTKIHKHYIDKLKGIKNR 256
            +YRLMK +  N W  + PY+N+LWLHY  DKM+  + +K + NT   K    K++     
Sbjct: 721  IYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRT 780

Query: 255  ILDYKSATDFV 223
            +L++ SATD +
Sbjct: 781  MLNFSSATDLL 791



 Score = 31.9 bits (69), Expect = 2.2
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -2

Query: 676 EHRDLHWGNVLI 641
           EHRDLHWGNVL+
Sbjct: 646 EHRDLHWGNVLL 657


>AF289865-1|AAK30300.1|  798|Homo sapiens haploid germ cell-specific
            nuclear protein kinase protein.
          Length = 798

 Score =  104 bits (249), Expect = 3e-22
 Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
 Frame = -3

Query: 612  FVLRGRRHCTPRCGVAATIIDYSLSRVSLPASAPARCAALYNDLADDDGLFDAVGDYQFE 433
            + L G+    P CG+  +IIDY+LSR+            ++ D++ D+ LF   GDYQF+
Sbjct: 667  YTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDEDLFTGDGDYQFD 720

Query: 432  VYRLMKSKLGNDWKNFEPYTNILWLHYTVDKMITALRYK-RTNTKIHKHYIDKLKGIKNR 256
            +YRLMK +  N W  + PY+N+LWLHY  DKM+  + +K + NT   K    K++     
Sbjct: 721  IYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRT 780

Query: 255  ILDYKSATDFV 223
            +L++ SATD +
Sbjct: 781  MLNFSSATDLL 791



 Score = 31.9 bits (69), Expect = 2.2
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -2

Query: 676 EHRDLHWGNVLI 641
           EHRDLHWGNVL+
Sbjct: 646 EHRDLHWGNVLL 657


>AB039834-1|BAB21938.3|  798|Homo sapiens H-Haspin protein.
          Length = 798

 Score =  104 bits (249), Expect = 3e-22
 Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
 Frame = -3

Query: 612  FVLRGRRHCTPRCGVAATIIDYSLSRVSLPASAPARCAALYNDLADDDGLFDAVGDYQFE 433
            + L G+    P CG+  +IIDY+LSR+            ++ D++ D+ LF   GDYQF+
Sbjct: 667  YTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDEDLFTGDGDYQFD 720

Query: 432  VYRLMKSKLGNDWKNFEPYTNILWLHYTVDKMITALRYK-RTNTKIHKHYIDKLKGIKNR 256
            +YRLMK +  N W  + PY+N+LWLHY  DKM+  + +K + NT   K    K++     
Sbjct: 721  IYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRT 780

Query: 255  ILDYKSATDFV 223
            +L++ SATD +
Sbjct: 781  MLNFSSATDLL 791



 Score = 31.9 bits (69), Expect = 2.2
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -2

Query: 676 EHRDLHWGNVLI 641
           EHRDLHWGNVL+
Sbjct: 646 EHRDLHWGNVLL 657


>BC016626-1|AAH16626.1|  773|Homo sapiens Unknown (protein for
           IMAGE:4524219) protein.
          Length = 773

 Score = 93.5 bits (222), Expect = 6e-19
 Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
 Frame = -3

Query: 612 FVLRGRRHCTPRCGVAATIIDYSLSRVSLPASAPARCAALYNDLADDDGLFDAVGDYQFE 433
           + L G+    P CG+  +IIDY+LSR+            ++ D++ D+ LF   GDYQF+
Sbjct: 667 YTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDEDLFTGDGDYQFD 720

Query: 432 VYRLMKSKLGNDWKNFEPYTNILWLHYTVDKMITALRYK-RTNTKIHK 292
           +YRLMK +  N W  + PY+N+LWLHY  DKM+  + +K + NT   K
Sbjct: 721 IYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMK 768



 Score = 31.9 bits (69), Expect = 2.2
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -2

Query: 676 EHRDLHWGNVLI 641
           EHRDLHWGNVL+
Sbjct: 646 EHRDLHWGNVLL 657


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,145,697
Number of Sequences: 237096
Number of extensions: 1396039
Number of successful extensions: 2864
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2860
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)