Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt14o12
         (651 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006140-1|AAH06140.1|  217|Homo sapiens HYI protein protein.         135   1e-31
AL583862-6|CAI14891.1|  229|Homo sapiens hydroxypyruvate isomera...   134   2e-31
AL583862-5|CAI14890.1|  204|Homo sapiens hydroxypyruvate isomera...   134   2e-31
AF284750-1|AAG59852.1|  204|Homo sapiens HT036-ISO protein.           134   2e-31
BC019041-1|AAH19041.1|  174|Homo sapiens HYI protein protein.         113   4e-25
AL583862-8|CAI14893.1|  247|Homo sapiens hydroxypyruvate isomera...   113   4e-25
AL583862-7|CAI14892.1|  165|Homo sapiens hydroxypyruvate isomera...   113   4e-25
AL583862-4|CAI14889.1|  180|Homo sapiens hydroxypyruvate isomera...   113   4e-25
AF284751-1|AAG59853.1|  174|Homo sapiens HT036 protein.               113   4e-25
AY775560-1|AAV84474.1|  229|Homo sapiens endothelial cell apopto...    83   1e-15

>BC006140-1|AAH06140.1|  217|Homo sapiens HYI protein protein.
          Length = 217

 Score =  135 bits (326), Expect = 1e-31
 Identities = 60/132 (45%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = -2

Query: 647 YAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIA 471
           +A  VL  E++ GL+EPIN + + P+YFL    +A  I++++  PNL+L +DIFH Q + 
Sbjct: 62  HAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIMD 121

Query: 470 GDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAIG 291
           G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L   GY  +VG EY+  G
Sbjct: 122 GNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLENEGYKGFVGCEYQPRG 181

Query: 290 NTKDGLTWINNY 255
           +T +GL+W+ +Y
Sbjct: 182 DTVEGLSWLRSY 193


>AL583862-6|CAI14891.1|  229|Homo sapiens hydroxypyruvate isomerase
           homolog (E. coli) protein.
          Length = 229

 Score =  134 bits (325), Expect = 2e-31
 Identities = 60/132 (45%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = -2

Query: 647 YAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIA 471
           +A  VL  E++ GL+EPIN + + P+YFL    +A  I++++  PNL+L +DIFH Q + 
Sbjct: 87  HAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIMD 146

Query: 470 GDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAIG 291
           G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L   GY  +VG EY+  G
Sbjct: 147 GNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVGCEYQPRG 206

Query: 290 NTKDGLTWINNY 255
           +T +GL+W+ +Y
Sbjct: 207 DTVEGLSWLRSY 218


>AL583862-5|CAI14890.1|  204|Homo sapiens hydroxypyruvate isomerase
           homolog (E. coli) protein.
          Length = 204

 Score =  134 bits (325), Expect = 2e-31
 Identities = 60/132 (45%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = -2

Query: 647 YAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIA 471
           +A  VL  E++ GL+EPIN + + P+YFL    +A  I++++  PNL+L +DIFH Q + 
Sbjct: 62  HAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIMD 121

Query: 470 GDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAIG 291
           G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L   GY  +VG EY+  G
Sbjct: 122 GNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVGCEYQPRG 181

Query: 290 NTKDGLTWINNY 255
           +T +GL+W+ +Y
Sbjct: 182 DTVEGLSWLRSY 193


>AF284750-1|AAG59852.1|  204|Homo sapiens HT036-ISO protein.
          Length = 204

 Score =  134 bits (325), Expect = 2e-31
 Identities = 60/132 (45%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = -2

Query: 647 YAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIA 471
           +A  VL  E++ GL+EPIN + + P+YFL    +A  I++++  PNL+L +DIFH Q + 
Sbjct: 62  HAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIMD 121

Query: 470 GDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVGLEYKAIG 291
           G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L   GY  +VG EY+  G
Sbjct: 122 GNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVGCEYQPRG 181

Query: 290 NTKDGLTWINNY 255
           +T +GL+W+ +Y
Sbjct: 182 DTVEGLSWLRSY 193


>BC019041-1|AAH19041.1|  174|Homo sapiens HYI protein protein.
          Length = 174

 Score =  113 bits (273), Expect = 4e-25
 Identities = 52/113 (46%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
 Frame = -2

Query: 647 YAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIA 471
           +A  VL  E++ GL+EPIN + + P+YFL    +A  I++++  PNL+L +DIFH Q + 
Sbjct: 62  HAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIMD 121

Query: 470 GDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVG 312
           G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L   GY  +VG
Sbjct: 122 GNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVG 174


>AL583862-8|CAI14893.1|  247|Homo sapiens hydroxypyruvate isomerase
           homolog (E. coli) protein.
          Length = 247

 Score =  113 bits (273), Expect = 4e-25
 Identities = 52/113 (46%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
 Frame = -2

Query: 647 YAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIA 471
           +A  VL  E++ GL+EPIN + + P+YFL    +A  I++++  PNL+L +DIFH Q + 
Sbjct: 135 HAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIMD 194

Query: 470 GDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVG 312
           G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L   GY  +VG
Sbjct: 195 GNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVG 247


>AL583862-7|CAI14892.1|  165|Homo sapiens hydroxypyruvate isomerase
           homolog (E. coli) protein.
          Length = 165

 Score =  113 bits (273), Expect = 4e-25
 Identities = 52/113 (46%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
 Frame = -2

Query: 647 YAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIA 471
           +A  VL  E++ GL+EPIN + + P+YFL    +A  I++++  PNL+L +DIFH Q + 
Sbjct: 53  HAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIMD 112

Query: 470 GDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVG 312
           G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L   GY  +VG
Sbjct: 113 GNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVG 165


>AL583862-4|CAI14889.1|  180|Homo sapiens hydroxypyruvate isomerase
           homolog (E. coli) protein.
          Length = 180

 Score =  113 bits (273), Expect = 4e-25
 Identities = 52/113 (46%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
 Frame = -2

Query: 647 YAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIA 471
           +A  VL  E++ GL+EPIN + + P+YFL    +A  I++++  PNL+L +DIFH Q + 
Sbjct: 68  HAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIMD 127

Query: 470 GDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVG 312
           G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L   GY  +VG
Sbjct: 128 GNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVG 180


>AF284751-1|AAG59853.1|  174|Homo sapiens HT036 protein.
          Length = 174

 Score =  113 bits (273), Expect = 4e-25
 Identities = 52/113 (46%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
 Frame = -2

Query: 647 YAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIA 471
           +A  VL  E++ GL+EPIN + + P+YFL    +A  I++++  PNL+L +DIFH Q + 
Sbjct: 62  HAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIMD 121

Query: 470 GDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWVG 312
           G++T NI + LP +GHVQ+AQVP R EP +PGE+N+ Y+ + L   GY  +VG
Sbjct: 122 GNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLLEDEGYKGFVG 174


>AY775560-1|AAV84474.1|  229|Homo sapiens endothelial cell apoptosis
           protein E-CE1 protein.
          Length = 229

 Score = 82.6 bits (195), Expect = 1e-15
 Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
 Frame = -2

Query: 647 YAVDVLKGENIQGLIEPIN-QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIA 471
           +A  VL  E++ GL+EPIN + + P+YFL    +A  I++++  PNL+L +DIFH Q + 
Sbjct: 135 HAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIMD 194

Query: 470 GDITHNITKLLPYIGHVQIAQVPN-RNEPDTPG 375
           G++T NI + LP +GHVQ+AQ P  R     PG
Sbjct: 195 GNLTGNIREFLPIVGHVQVAQGPRPRGAQQAPG 227


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,307,752
Number of Sequences: 237096
Number of extensions: 1716871
Number of successful extensions: 2825
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2815
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)