Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14n23
(424 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 26 0.15
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 26 0.15
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.9
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 3.3
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 5.7
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 5.7
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 5.7
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 7.5
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 7.5
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 20 10.0
AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. 20 10.0
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 26.2 bits (55), Expect = 0.15
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 59 YIQVPESSCS-FLLNINDPILFQSRHNPMNV 148
Y+ +PE+ S FLL P+ + + PMNV
Sbjct: 562 YLCMPENQDSQFLLEYRGPVTMKGKSEPMNV 592
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 26.2 bits (55), Expect = 0.15
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 59 YIQVPESSCS-FLLNINDPILFQSRHNPMNV 148
Y+ +PE+ S FLL P+ + + PMNV
Sbjct: 562 YLCMPENQDSQFLLEYRGPVTMKGKSEPMNV 592
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 1.9
Identities = 6/16 (37%), Positives = 13/16 (81%)
Frame = -1
Query: 172 FVAWIPHLHIHGIVSR 125
F++W+P L +GI+++
Sbjct: 1231 FISWLPPLEPNGIITK 1246
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 1.9
Identities = 6/16 (37%), Positives = 13/16 (81%)
Frame = -1
Query: 172 FVAWIPHLHIHGIVSR 125
F++W+P L +GI+++
Sbjct: 1227 FISWLPPLEPNGIITK 1242
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 21.8 bits (44), Expect = 3.3
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = +1
Query: 58 VYSGTGIVMFLLVKYK 105
+Y G ++FLL+++K
Sbjct: 127 LYGGNSTIIFLLIRFK 142
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.0 bits (42), Expect = 5.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 261 WHQSRILQLNNIRT 220
W++ R L+ +NIRT
Sbjct: 330 WNEHRTLERHNIRT 343
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.0 bits (42), Expect = 5.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 261 WHQSRILQLNNIRT 220
W++ R L+ +NIRT
Sbjct: 330 WNEHRTLERHNIRT 343
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.0 bits (42), Expect = 5.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 261 WHQSRILQLNNIRT 220
W++ R L+ +NIRT
Sbjct: 330 WNEHRTLERHNIRT 343
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 20.6 bits (41), Expect = 7.5
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = +2
Query: 89 FLLNINDPILFQSRHNPMNVKVRNPCHKKVTVGIGSFL*PKF 214
FL+ I ++ H P N + K + I F+ PK+
Sbjct: 486 FLIKIRQ---YRLNHKPFNFHITINADKPMKAAIRIFIGPKY 524
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 20.6 bits (41), Expect = 7.5
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = +2
Query: 89 FLLNINDPILFQSRHNPMNVKVRNPCHKKVTVGIGSFL*PKF 214
FL+ I ++ H P N + K + I F+ PK+
Sbjct: 486 FLIKIRQ---YRLNHKPFNFHITINADKPMKAAIRIFIGPKY 524
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 20.2 bits (40), Expect = 10.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 181 SYFFVAWIPHLHIH 140
S +F+AW P+L I+
Sbjct: 285 SLWFMAWTPYLVIN 298
>AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein.
Length = 76
Score = 20.2 bits (40), Expect = 10.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 181 SYFFVAWIPHLHIH 140
S +F+AW P+L I+
Sbjct: 35 SLWFMAWTPYLVIN 48
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,633
Number of Sequences: 438
Number of extensions: 2593
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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