Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt14m22
         (703 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL592114-6|CAH71228.1| 1048|Homo sapiens pleckstrin homology dom...    30   9.2  
AL592114-5|CAH71229.1| 1068|Homo sapiens pleckstrin homology dom...    30   9.2  
AB023186-1|BAA76813.2| 1091|Homo sapiens KIAA0969 protein protein.     30   9.2  

>AL592114-6|CAH71228.1| 1048|Homo sapiens pleckstrin homology domain
           containing, family A member 6 protein.
          Length = 1048

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -3

Query: 677 PVTPRRQAEWWSVLPDMGSCPPAPKVKPTDDEWPSQIVVRTNLS 546
           P     +AE  + L  +G  PP  K  PTDDE     VVR N S
Sbjct: 752 PTRQEVEAEKQAALNKVGVVPPRTK-SPTDDEVTPSAVVRRNAS 794


>AL592114-5|CAH71229.1| 1068|Homo sapiens pleckstrin homology domain
           containing, family A member 6 protein.
          Length = 1068

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -3

Query: 677 PVTPRRQAEWWSVLPDMGSCPPAPKVKPTDDEWPSQIVVRTNLS 546
           P     +AE  + L  +G  PP  K  PTDDE     VVR N S
Sbjct: 772 PTRQEVEAEKQAALNKVGVVPPRTK-SPTDDEVTPSAVVRRNAS 814


>AB023186-1|BAA76813.2| 1091|Homo sapiens KIAA0969 protein protein.
          Length = 1091

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -3

Query: 677 PVTPRRQAEWWSVLPDMGSCPPAPKVKPTDDEWPSQIVVRTNLS 546
           P     +AE  + L  +G  PP  K  PTDDE     VVR N S
Sbjct: 795 PTRQEVEAEKQAALNKVGVVPPRTK-SPTDDEVTPSAVVRRNAS 837


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,481,883
Number of Sequences: 237096
Number of extensions: 2003004
Number of successful extensions: 6396
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6355
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)