Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt14m02
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010039-1|AAQ22508.1|  567|Drosophila melanogaster LD39302p pro...    28   9.4  
BT001344-1|AAN71099.1|  545|Drosophila melanogaster AT23187p pro...    28   9.4  
AY128463-1|AAM75056.1|  817|Drosophila melanogaster RE18773p pro...    28   9.4  
AY069458-1|AAL39603.1|  552|Drosophila melanogaster LD18435p pro...    28   9.4  
AY043267-1|AAK85705.1|  566|Drosophila melanogaster CCR4 protein.      28   9.4  
AE014297-3495|AAF56256.2|  545|Drosophila melanogaster CG31137-P...    28   9.4  
AE014297-3494|AAO41599.1|  552|Drosophila melanogaster CG31137-P...    28   9.4  
AE014297-3493|AAF56258.2|  552|Drosophila melanogaster CG31137-P...    28   9.4  
AE014297-3492|AAF56259.2|  552|Drosophila melanogaster CG31137-P...    28   9.4  
AE014297-3491|AAN13986.1|  567|Drosophila melanogaster CG31137-P...    28   9.4  
AE014296-277|AAS64930.1|  817|Drosophila melanogaster CG7852-PC,...    28   9.4  
AE014296-276|AAN11487.1| 1449|Drosophila melanogaster CG7852-PB,...    28   9.4  
AE014296-275|AAF47507.1| 1449|Drosophila melanogaster CG7852-PA,...    28   9.4  

>BT010039-1|AAQ22508.1|  567|Drosophila melanogaster LD39302p
           protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 8   IXNVKLKSEMCNEFTARNLFGFYYSMKQC--NTKQILIAQIRHYS 136
           I  V   + +C+++  R ++G+  S   C    K+ +I +IRHY+
Sbjct: 206 IFTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYA 250


>BT001344-1|AAN71099.1|  545|Drosophila melanogaster AT23187p
           protein.
          Length = 545

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 8   IXNVKLKSEMCNEFTARNLFGFYYSMKQC--NTKQILIAQIRHYS 136
           I  V   + +C+++  R ++G+  S   C    K+ +I +IRHY+
Sbjct: 184 IFTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYA 228


>AY128463-1|AAM75056.1|  817|Drosophila melanogaster RE18773p
           protein.
          Length = 817

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 444 GYVLFGHQMGIESSGDFGNGFQNFILINCFILISILVTSRSHTRFTEL 587
           GYV  G   G+  SG  G+G  + ++ +C +   +    RS  RF ++
Sbjct: 478 GYVGRGAGGGVSGSGSSGSGGVDAMISSCTLPTGLQAARRSKERFQQM 525


>AY069458-1|AAL39603.1|  552|Drosophila melanogaster LD18435p
           protein.
          Length = 552

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 8   IXNVKLKSEMCNEFTARNLFGFYYSMKQC--NTKQILIAQIRHYS 136
           I  V   + +C+++  R ++G+  S   C    K+ +I +IRHY+
Sbjct: 191 IFTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYA 235


>AY043267-1|AAK85705.1|  566|Drosophila melanogaster CCR4 protein.
          Length = 566

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 8   IXNVKLKSEMCNEFTARNLFGFYYSMKQC--NTKQILIAQIRHYS 136
           I  V   + +C+++  R ++G+  S   C    K+ +I +IRHY+
Sbjct: 205 IFTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYA 249


>AE014297-3495|AAF56256.2|  545|Drosophila melanogaster CG31137-PB,
           isoform B protein.
          Length = 545

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 8   IXNVKLKSEMCNEFTARNLFGFYYSMKQC--NTKQILIAQIRHYS 136
           I  V   + +C+++  R ++G+  S   C    K+ +I +IRHY+
Sbjct: 184 IFTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYA 228


>AE014297-3494|AAO41599.1|  552|Drosophila melanogaster CG31137-PF,
           isoform F protein.
          Length = 552

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 8   IXNVKLKSEMCNEFTARNLFGFYYSMKQC--NTKQILIAQIRHYS 136
           I  V   + +C+++  R ++G+  S   C    K+ +I +IRHY+
Sbjct: 191 IFTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYA 235


>AE014297-3493|AAF56258.2|  552|Drosophila melanogaster CG31137-PE,
           isoform E protein.
          Length = 552

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 8   IXNVKLKSEMCNEFTARNLFGFYYSMKQC--NTKQILIAQIRHYS 136
           I  V   + +C+++  R ++G+  S   C    K+ +I +IRHY+
Sbjct: 191 IFTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYA 235


>AE014297-3492|AAF56259.2|  552|Drosophila melanogaster CG31137-PA,
           isoform A protein.
          Length = 552

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 8   IXNVKLKSEMCNEFTARNLFGFYYSMKQC--NTKQILIAQIRHYS 136
           I  V   + +C+++  R ++G+  S   C    K+ +I +IRHY+
Sbjct: 191 IFTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYA 235


>AE014297-3491|AAN13986.1|  567|Drosophila melanogaster CG31137-PC,
           isoform C protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 8   IXNVKLKSEMCNEFTARNLFGFYYSMKQC--NTKQILIAQIRHYS 136
           I  V   + +C+++  R ++G+  S   C    K+ +I +IRHY+
Sbjct: 206 IFTVMCYNVLCDKYATRQMYGYCPSWALCWEYRKKSIIDEIRHYA 250


>AE014296-277|AAS64930.1|  817|Drosophila melanogaster CG7852-PC,
           isoform C protein.
          Length = 817

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 444 GYVLFGHQMGIESSGDFGNGFQNFILINCFILISILVTSRSHTRFTEL 587
           GYV  G   G+  SG  G+G  + ++ +C +   +    RS  RF ++
Sbjct: 478 GYVGRGAGGGVSGSGSSGSGGVDAMISSCTLPTGLQAARRSKERFQQM 525


>AE014296-276|AAN11487.1| 1449|Drosophila melanogaster CG7852-PB,
           isoform B protein.
          Length = 1449

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 444 GYVLFGHQMGIESSGDFGNGFQNFILINCFILISILVTSRSHTRFTEL 587
           GYV  G   G+  SG  G+G  + ++ +C +   +    RS  RF ++
Sbjct: 478 GYVGRGAGGGVSGSGSSGSGGVDAMISSCTLPTGLQAARRSKERFQQM 525


>AE014296-275|AAF47507.1| 1449|Drosophila melanogaster CG7852-PA,
           isoform A protein.
          Length = 1449

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 444 GYVLFGHQMGIESSGDFGNGFQNFILINCFILISILVTSRSHTRFTEL 587
           GYV  G   G+  SG  G+G  + ++ +C +   +    RS  RF ++
Sbjct: 478 GYVGRGAGGGVSGSGSSGSGGVDAMISSCTLPTGLQAARRSKERFQQM 525


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,461,822
Number of Sequences: 53049
Number of extensions: 416176
Number of successful extensions: 629
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)